Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 MIR4436A-201ENST00000585278 85 ntBASIC0.15□□□□□ -2.38
SALL3Q9BXA9 Y_RNA.781-201ENST00000620301 103 ntBASIC0.15□□□□□ -2.38
SALL3Q9BXA9 MIR6874-201ENST00000635894 71 ntBASIC0.15□□□□□ -2.38
SALL3Q9BXA9 MIR548AH-201ENST00000637109 76 ntBASIC0.14□□□□□ -2.39
SALL3Q9BXA9 RNU6-46P-201ENST00000383860 107 ntBASIC0.13□□□□□ -2.39
SALL3Q9BXA9 AC104692.1-201ENST00000472406 90 ntBASIC0.13□□□□□ -2.39
SALL3Q9BXA9 AC093726.3-201ENST00000637588 150 ntBASIC0.13□□□□□ -2.39
SALL3Q9BXA9 RNU6-1157P-201ENST00000384456 106 ntBASIC0.12□□□□□ -2.39
SALL3Q9BXA9 MIR4290-201ENST00000583807 95 ntBASIC0.12□□□□□ -2.39
SALL3Q9BXA9 AC091912.2-201ENST00000624798 167 ntBASIC0.12□□□□□ -2.39
SALL3Q9BXA9 SNORD19B.1-201ENST00000630615 80 ntBASIC0.12□□□□□ -2.39
SALL3Q9BXA9 MIR604-201ENST00000384880 94 ntBASIC0.11□□□□□ -2.39
SALL3Q9BXA9 RNU6-345P-201ENST00000517001 107 ntBASIC0.11□□□□□ -2.39
SALL3Q9BXA9 MIR23C-201ENST00000579846 100 ntBASIC0.11□□□□□ -2.39
SALL3Q9BXA9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.11□□□□□ -2.39
SALL3Q9BXA9 MIR382-201ENST00000637119 76 ntBASIC0.11□□□□□ -2.39
SALL3Q9BXA9 SNORA32.1-201ENST00000364514 115 ntBASIC0.1□□□□□ -2.39
SALL3Q9BXA9 RNU6-164P-201ENST00000364604 103 ntBASIC0.09□□□□□ -2.4
SALL3Q9BXA9 MIR8485-201ENST00000401372 91 ntBASIC0.09□□□□□ -2.4
SALL3Q9BXA9 Y_RNA.696-201ENST00000516725 107 ntBASIC0.09□□□□□ -2.4
SALL3Q9BXA9 MIR1295B-201ENST00000636144 60 ntBASIC0.09□□□□□ -2.4
SALL3Q9BXA9 AC018880.2-201ENST00000414265 201 ntBASIC0.08□□□□□ -2.4
SALL3Q9BXA9 AP001180.6-201ENST00000584918 159 ntBASIC0.08□□□□□ -2.4
SALL3Q9BXA9 RNU6-1340P-201ENST00000384438 107 ntBASIC0.07□□□□□ -2.4
SALL3Q9BXA9 MIR3123-201ENST00000583417 75 ntBASIC0.07□□□□□ -2.4
SALL3Q9BXA9 MIR4493-201ENST00000584016 73 ntBASIC0.07□□□□□ -2.4
SALL3Q9BXA9 MIR4788-201ENST00000639104 80 ntBASIC0.07□□□□□ -2.4
SALL3Q9BXA9 RNA5SP300-201ENST00000391197 107 ntBASIC0.06□□□□□ -2.4
SALL3Q9BXA9 Y_RNA.610-201ENST00000410681 103 ntBASIC0.06□□□□□ -2.4
SALL3Q9BXA9 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
SALL3Q9BXA9 SNORD114-12-201ENST00000365400 75 ntBASIC0.05□□□□□ -2.4
SALL3Q9BXA9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.05□□□□□ -2.4
SALL3Q9BXA9 MIR409-201ENST00000362237 79 ntBASIC0.04□□□□□ -2.4
SALL3Q9BXA9 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
SALL3Q9BXA9 SNORD114-25-201ENST00000363742 72 ntBASIC0.04□□□□□ -2.4
SALL3Q9BXA9 MIR204-201ENST00000385200 110 ntBASIC0.04□□□□□ -2.4
SALL3Q9BXA9 RNU6-892P-201ENST00000410335 99 ntBASIC0.04□□□□□ -2.4
SALL3Q9BXA9 MIR487B-201ENST00000385021 84 ntBASIC0.03□□□□□ -2.4
SALL3Q9BXA9 SNORD115-45-201ENST00000391078 81 ntBASIC0.03□□□□□ -2.4
SALL3Q9BXA9 SNORA18.1-201ENST00000363418 128 ntBASIC0.02□□□□□ -2.41
SALL3Q9BXA9 Y_RNA.484-201ENST00000384389 103 ntBASIC0.02□□□□□ -2.41
SALL3Q9BXA9 MIR3666-201ENST00000607845 111 ntBASIC0.02□□□□□ -2.41
SALL3Q9BXA9 RNU6-1034P-201ENST00000365335 101 ntBASIC0.01□□□□□ -2.41
SALL3Q9BXA9 RNU6-1161P-201ENST00000516176 102 ntBASIC0.01□□□□□ -2.41
SALL3Q9BXA9 RNU6-737P-201ENST00000365370 107 ntBASIC0□□□□□ -2.41
SALL3Q9BXA9 MIR196A2-201ENST00000385189 110 ntBASIC0□□□□□ -2.41
SALL3Q9BXA9 SNORA3B-201ENST00000391305 131 ntBASIC0□□□□□ -2.41
SALL3Q9BXA9 RNA5SP266-201ENST00000410273 108 ntBASIC0□□□□□ -2.41
SALL3Q9BXA9 SNORD4A-201ENST00000459174 72 ntBASIC0□□□□□ -2.41
SALL3Q9BXA9 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.02□□□□□ -2.41
SALL3Q9BXA9 RNU6-422P-201ENST00000384632 107 ntBASIC-0.02□□□□□ -2.41
SALL3Q9BXA9 RPS29P8-201ENST00000445109 171 ntBASIC-0.02□□□□□ -2.41
SALL3Q9BXA9 MIR6502-201ENST00000617296 76 ntBASIC-0.02□□□□□ -2.41
SALL3Q9BXA9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.03□□□□□ -2.41
SALL3Q9BXA9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
SALL3Q9BXA9 RNU6-983P-201ENST00000516004 103 ntBASIC-0.03□□□□□ -2.41
SALL3Q9BXA9 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 AC097484.2-201ENST00000509147 251 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 MIR548AM-201ENST00000584298 74 ntBASIC-0.05□□□□□ -2.42
SALL3Q9BXA9 MIR101-1-201ENST00000362265 75 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 RNU6-400P-201ENST00000391173 106 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 MIR4723-201ENST00000585070 81 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.06□□□□□ -2.42
SALL3Q9BXA9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.07□□□□□ -2.42
SALL3Q9BXA9 MIR214-201ENST00000385214 110 ntBASIC-0.07□□□□□ -2.42
SALL3Q9BXA9 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.08□□□□□ -2.42
SALL3Q9BXA9 RNU6-706P-201ENST00000517229 104 ntBASIC-0.08□□□□□ -2.42
SALL3Q9BXA9 AC021146.6-201ENST00000514659 117 ntBASIC-0.09□□□□□ -2.42
SALL3Q9BXA9 MIR4499-201ENST00000584834 69 ntBASIC-0.09□□□□□ -2.42
SALL3Q9BXA9 RNU6-841P-201ENST00000383872 107 ntBASIC-0.1□□□□□ -2.42
SALL3Q9BXA9 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.1□□□□□ -2.42
SALL3Q9BXA9 SNORD126-201ENST00000459475 77 ntBASIC-0.1□□□□□ -2.42
SALL3Q9BXA9 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.11□□□□□ -2.43
SALL3Q9BXA9 MIR3681-201ENST00000580089 72 ntBASIC-0.11□□□□□ -2.43
SALL3Q9BXA9 RNA5SP86-201ENST00000390869 98 ntBASIC-0.12□□□□□ -2.43
SALL3Q9BXA9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.12□□□□□ -2.43
SALL3Q9BXA9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 MIR224-201ENST00000384889 81 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 RNU6-576P-201ENST00000390854 102 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 AL731768.1-201ENST00000603124 139 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 MIR4756-201ENST00000577874 78 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 MIR8064-201ENST00000612863 90 ntBASIC-0.13□□□□□ -2.43
SALL3Q9BXA9 SNX3P1X-201ENST00000414887 175 ntBASIC-0.14□□□□□ -2.43
SALL3Q9BXA9 MIR4520-1-201ENST00000582609 70 ntBASIC-0.14□□□□□ -2.43
SALL3Q9BXA9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.15□□□□□ -2.43
SALL3Q9BXA9 SNORD14C-201ENST00000365382 88 ntBASIC-0.15□□□□□ -2.43
SALL3Q9BXA9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.15□□□□□ -2.43
SALL3Q9BXA9 RNA5SP449-201ENST00000516871 130 ntBASIC-0.15□□□□□ -2.43
SALL3Q9BXA9 MIR196A1-201ENST00000388006 70 ntBASIC-0.16□□□□□ -2.44
SALL3Q9BXA9 RNU6-226P-201ENST00000363778 107 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms