Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MIR548N-201ENST00000408742 75 ntBASIC-1.8□□□□□ -2.7
HDHD3Q9BSH5 RNU6-800P-201ENST00000384473 103 ntBASIC-1.81□□□□□ -2.7
HDHD3Q9BSH5 RNU6-983P-201ENST00000516004 103 ntBASIC-1.81□□□□□ -2.7
HDHD3Q9BSH5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
HDHD3Q9BSH5 MIR3938-201ENST00000582157 103 ntBASIC-1.82□□□□□ -2.7
HDHD3Q9BSH5 SNORD18C-201ENST00000362704 69 ntBASIC-1.83□□□□□ -2.7
HDHD3Q9BSH5 AC110620.1-201ENST00000416042 228 ntBASIC-1.83□□□□□ -2.7
HDHD3Q9BSH5 AC108019.1-201ENST00000512540 175 ntBASIC-1.83□□□□□ -2.7
HDHD3Q9BSH5 MIR202-201ENST00000362219 110 ntBASIC-1.84□□□□□ -2.7
HDHD3Q9BSH5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.84□□□□□ -2.7
HDHD3Q9BSH5 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.84□□□□□ -2.7
HDHD3Q9BSH5 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.84□□□□□ -2.7
HDHD3Q9BSH5 AL451105.1-201ENST00000450005 189 ntBASIC-1.84□□□□□ -2.7
HDHD3Q9BSH5 SNORD18.1-201ENST00000363807 70 ntBASIC-1.85□□□□□ -2.71
HDHD3Q9BSH5 RNU6-776P-201ENST00000364403 104 ntBASIC-1.85□□□□□ -2.71
HDHD3Q9BSH5 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.85□□□□□ -2.71
HDHD3Q9BSH5 SNORD60-201ENST00000383903 83 ntBASIC-1.85□□□□□ -2.71
HDHD3Q9BSH5 MIR466-201ENST00000580653 84 ntBASIC-1.85□□□□□ -2.71
HDHD3Q9BSH5 SNORA17.4-201ENST00000391287 132 ntBASIC-1.86□□□□□ -2.71
HDHD3Q9BSH5 MIR548W-201ENST00000581970 74 ntBASIC-1.86□□□□□ -2.71
HDHD3Q9BSH5 MIR4679-1-201ENST00000637619 75 ntBASIC-1.87□□□□□ -2.71
HDHD3Q9BSH5 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.88□□□□□ -2.71
HDHD3Q9BSH5 RNU6-530P-201ENST00000391180 107 ntBASIC-1.88□□□□□ -2.71
HDHD3Q9BSH5 RNU6-419P-201ENST00000517030 63 ntBASIC-1.88□□□□□ -2.71
HDHD3Q9BSH5 MIR4662A-201ENST00000637499 67 ntBASIC-1.89□□□□□ -2.71
HDHD3Q9BSH5 snoU13.10-201ENST00000459301 103 ntBASIC-1.91□□□□□ -2.72
HDHD3Q9BSH5 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.91□□□□□ -2.72
HDHD3Q9BSH5 MIR4756-201ENST00000577874 78 ntBASIC-1.91□□□□□ -2.72
HDHD3Q9BSH5 SNORD45.2-201ENST00000363552 72 ntBASIC-1.92□□□□□ -2.72
HDHD3Q9BSH5 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.92□□□□□ -2.72
HDHD3Q9BSH5 RNU6-68P-201ENST00000516576 104 ntBASIC-1.92□□□□□ -2.72
HDHD3Q9BSH5 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.93□□□□□ -2.72
HDHD3Q9BSH5 RNU6-471P-201ENST00000383944 106 ntBASIC-1.93□□□□□ -2.72
HDHD3Q9BSH5 RNU4-88P-201ENST00000411220 86 ntBASIC-1.93□□□□□ -2.72
HDHD3Q9BSH5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.94□□□□□ -2.72
HDHD3Q9BSH5 MIR664B-201ENST00000626756 61 ntBASIC-1.94□□□□□ -2.72
HDHD3Q9BSH5 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.95□□□□□ -2.72
HDHD3Q9BSH5 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.95□□□□□ -2.72
HDHD3Q9BSH5 MIR4426-201ENST00000640330 63 ntBASIC-1.96□□□□□ -2.72
HDHD3Q9BSH5 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.98□□□□□ -2.73
HDHD3Q9BSH5 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.98□□□□□ -2.73
HDHD3Q9BSH5 AC114801.3-201ENST00000510231 177 ntBASIC-1.99□□□□□ -2.73
HDHD3Q9BSH5 RNU6-446P-201ENST00000362827 106 ntBASIC-2□□□□□ -2.73
HDHD3Q9BSH5 RNU6-742P-201ENST00000365289 107 ntBASIC-2□□□□□ -2.73
HDHD3Q9BSH5 Y_RNA.349-201ENST00000365406 102 ntBASIC-2□□□□□ -2.73
HDHD3Q9BSH5 MIR496-201ENST00000385226 102 ntBASIC-2□□□□□ -2.73
HDHD3Q9BSH5 RNU6-980P-201ENST00000516925 103 ntBASIC-2□□□□□ -2.73
HDHD3Q9BSH5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2□□□□□ -2.73
HDHD3Q9BSH5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2□□□□□ -2.73
HDHD3Q9BSH5 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.01□□□□□ -2.73
HDHD3Q9BSH5 RNU6-119P-201ENST00000364882 107 ntBASIC-2.01□□□□□ -2.73
HDHD3Q9BSH5 RNU6-590P-201ENST00000365039 107 ntBASIC-2.01□□□□□ -2.73
HDHD3Q9BSH5 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.02□□□□□ -2.73
HDHD3Q9BSH5 MIR548X-201ENST00000580069 75 ntBASIC-2.02□□□□□ -2.73
HDHD3Q9BSH5 MIR379-201ENST00000362218 67 ntBASIC-2.03□□□□□ -2.73
HDHD3Q9BSH5 RNU6-300P-201ENST00000459080 104 ntBASIC-2.03□□□□□ -2.73
HDHD3Q9BSH5 RNU6-176P-201ENST00000517196 105 ntBASIC-2.03□□□□□ -2.73
HDHD3Q9BSH5 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.03□□□□□ -2.73
HDHD3Q9BSH5 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.05□□□□□ -2.74
HDHD3Q9BSH5 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.05□□□□□ -2.74
HDHD3Q9BSH5 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.05□□□□□ -2.74
HDHD3Q9BSH5 AC097484.2-201ENST00000509147 251 ntBASIC-2.06□□□□□ -2.74
HDHD3Q9BSH5 RNU6-118P-201ENST00000516552 102 ntBASIC-2.06□□□□□ -2.74
HDHD3Q9BSH5 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.08□□□□□ -2.74
HDHD3Q9BSH5 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.08□□□□□ -2.74
HDHD3Q9BSH5 RNU6-912P-201ENST00000363800 104 ntBASIC-2.09□□□□□ -2.74
HDHD3Q9BSH5 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.09□□□□□ -2.74
HDHD3Q9BSH5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.09□□□□□ -2.74
HDHD3Q9BSH5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.09□□□□□ -2.74
HDHD3Q9BSH5 MIR4748-201ENST00000578076 82 ntBASIC-2.11□□□□□ -2.75
HDHD3Q9BSH5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.11□□□□□ -2.75
HDHD3Q9BSH5 SNORD113-4-201ENST00000364802 75 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.12□□□□□ -2.75
HDHD3Q9BSH5 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.13□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.13□□□□□ -2.75
HDHD3Q9BSH5 SNORD113-3-201ENST00000364830 72 ntBASIC-2.13□□□□□ -2.75
HDHD3Q9BSH5 FTX_4.1-201ENST00000616291 147 ntBASIC-2.13□□□□□ -2.75
HDHD3Q9BSH5 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.14□□□□□ -2.75
HDHD3Q9BSH5 RNA5SP405-201ENST00000363059 114 ntBASIC-2.15□□□□□ -2.75
HDHD3Q9BSH5 RNU6-829P-201ENST00000363700 112 ntBASIC-2.18□□□□□ -2.76
HDHD3Q9BSH5 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.2□□□□□ -2.76
HDHD3Q9BSH5 SNORD54-201ENST00000459159 67 ntBASIC-2.21□□□□□ -2.76
HDHD3Q9BSH5 RNU6-194P-201ENST00000363862 105 ntBASIC-2.22□□□□□ -2.76
HDHD3Q9BSH5 MIR633-201ENST00000384821 98 ntBASIC-2.23□□□□□ -2.77
HDHD3Q9BSH5 MIR3139-201ENST00000579145 76 ntBASIC-2.24□□□□□ -2.77
HDHD3Q9BSH5 RNU4-33P-201ENST00000364316 85 ntBASIC-2.25□□□□□ -2.77
HDHD3Q9BSH5 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.25□□□□□ -2.77
HDHD3Q9BSH5 AC139453.2-201ENST00000487255 133 ntBASIC-2.25□□□□□ -2.77
HDHD3Q9BSH5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.25□□□□□ -2.77
HDHD3Q9BSH5 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.26□□□□□ -2.77
HDHD3Q9BSH5 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.26□□□□□ -2.77
HDHD3Q9BSH5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.26□□□□□ -2.77
HDHD3Q9BSH5 MIR548H4-201ENST00000408689 111 ntBASIC-2.26□□□□□ -2.77
HDHD3Q9BSH5 RNU6-638P-201ENST00000516582 104 ntBASIC-2.26□□□□□ -2.77
HDHD3Q9BSH5 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms