Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RNU6-361P-201ENST00000364454 107 ntBASIC-2.12□□□□□ -2.75
NDNQ99608 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.12□□□□□ -2.75
NDNQ99608 RNU6-471P-201ENST00000383944 106 ntBASIC-2.13□□□□□ -2.75
NDNQ99608 AL451105.1-201ENST00000450005 189 ntBASIC-2.13□□□□□ -2.75
NDNQ99608 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.13□□□□□ -2.75
NDNQ99608 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.14□□□□□ -2.75
NDNQ99608 SNORD114-3-201ENST00000364969 75 ntBASIC-2.15□□□□□ -2.75
NDNQ99608 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.15□□□□□ -2.75
NDNQ99608 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.15□□□□□ -2.75
NDNQ99608 SNORA17.4-201ENST00000391287 132 ntBASIC-2.15□□□□□ -2.75
NDNQ99608 MIR202-201ENST00000362219 110 ntBASIC-2.16□□□□□ -2.76
NDNQ99608 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.16□□□□□ -2.76
NDNQ99608 AC114801.3-201ENST00000510231 177 ntBASIC-2.16□□□□□ -2.76
NDNQ99608 RNU6-983P-201ENST00000516004 103 ntBASIC-2.16□□□□□ -2.76
NDNQ99608 RNU6-530P-201ENST00000391180 107 ntBASIC-2.17□□□□□ -2.76
NDNQ99608 MIR548N-201ENST00000408742 75 ntBASIC-2.17□□□□□ -2.76
NDNQ99608 MIR487B-201ENST00000385021 84 ntBASIC-2.18□□□□□ -2.76
NDNQ99608 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
NDNQ99608 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.18□□□□□ -2.76
NDNQ99608 RNU6-419P-201ENST00000517030 63 ntBASIC-2.19□□□□□ -2.76
NDNQ99608 MIR548AM-201ENST00000584298 74 ntBASIC-2.19□□□□□ -2.76
NDNQ99608 SNORD18.1-201ENST00000363807 70 ntBASIC-2.2□□□□□ -2.76
NDNQ99608 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.21□□□□□ -2.76
NDNQ99608 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.22□□□□□ -2.76
NDNQ99608 RNU6-176P-201ENST00000517196 105 ntBASIC-2.25□□□□□ -2.77
NDNQ99608 MIR581-201ENST00000384895 96 ntBASIC-2.26□□□□□ -2.77
NDNQ99608 MIR4723-201ENST00000585070 81 ntBASIC-2.26□□□□□ -2.77
NDNQ99608 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.27□□□□□ -2.77
NDNQ99608 SNORA72.7-201ENST00000516349 94 ntBASIC-2.27□□□□□ -2.77
NDNQ99608 MIR4426-201ENST00000640330 63 ntBASIC-2.28□□□□□ -2.77
NDNQ99608 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.3□□□□□ -2.78
NDNQ99608 RNY4P27-201ENST00000363341 96 ntBASIC-2.3□□□□□ -2.78
NDNQ99608 MIR1207-201ENST00000408249 87 ntBASIC-2.3□□□□□ -2.78
NDNQ99608 RNU6-300P-201ENST00000459080 104 ntBASIC-2.32□□□□□ -2.78
NDNQ99608 MIR379-201ENST00000362218 67 ntBASIC-2.33□□□□□ -2.78
NDNQ99608 MIR548X-201ENST00000580069 75 ntBASIC-2.33□□□□□ -2.78
NDNQ99608 AC108019.1-201ENST00000512540 175 ntBASIC-2.34□□□□□ -2.78
NDNQ99608 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.35□□□□□ -2.79
NDNQ99608 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.35□□□□□ -2.79
NDNQ99608 RNU6-590P-201ENST00000365039 107 ntBASIC-2.35□□□□□ -2.79
NDNQ99608 snoU13.10-201ENST00000459301 103 ntBASIC-2.36□□□□□ -2.79
NDNQ99608 MIR548W-201ENST00000581970 74 ntBASIC-2.36□□□□□ -2.79
NDNQ99608 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.37□□□□□ -2.79
NDNQ99608 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.39□□□□□ -2.79
NDNQ99608 RNU4-88P-201ENST00000411220 86 ntBASIC-2.4□□□□□ -2.79
NDNQ99608 MIR4756-201ENST00000577874 78 ntBASIC-2.4□□□□□ -2.79
NDNQ99608 RNU6-446P-201ENST00000362827 106 ntBASIC-2.41□□□□□ -2.8
NDNQ99608 RNU6-638P-201ENST00000516582 104 ntBASIC-2.41□□□□□ -2.8
NDNQ99608 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.42□□□□□ -2.8
NDNQ99608 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.42□□□□□ -2.8
NDNQ99608 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.42□□□□□ -2.8
NDNQ99608 RNU6-742P-201ENST00000365289 107 ntBASIC-2.44□□□□□ -2.8
NDNQ99608 MIR664B-201ENST00000626756 61 ntBASIC-2.44□□□□□ -2.8
NDNQ99608 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.45□□□□□ -2.8
NDNQ99608 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.46□□□□□ -2.8
NDNQ99608 RNU6-118P-201ENST00000516552 102 ntBASIC-2.46□□□□□ -2.8
NDNQ99608 AC125388.1-201ENST00000459631 156 ntBASIC-2.47□□□□□ -2.8
NDNQ99608 RNU6-68P-201ENST00000516576 104 ntBASIC-2.47□□□□□ -2.8
NDNQ99608 RNU6-980P-201ENST00000516925 103 ntBASIC-2.47□□□□□ -2.8
NDNQ99608 AC097484.2-201ENST00000509147 251 ntBASIC-2.48□□□□□ -2.81
NDNQ99608 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.49□□□□□ -2.81
NDNQ99608 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.5□□□□□ -2.81
NDNQ99608 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.5□□□□□ -2.81
NDNQ99608 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.51□□□□□ -2.81
NDNQ99608 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.52□□□□□ -2.81
NDNQ99608 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.52□□□□□ -2.81
NDNQ99608 RNU6-912P-201ENST00000363800 104 ntBASIC-2.53□□□□□ -2.81
NDNQ99608 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.53□□□□□ -2.81
NDNQ99608 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.53□□□□□ -2.81
NDNQ99608 RNU6-119P-201ENST00000364882 107 ntBASIC-2.54□□□□□ -2.82
NDNQ99608 RNU6-829P-201ENST00000363700 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.55□□□□□ -2.82
NDNQ99608 MIR633-201ENST00000384821 98 ntBASIC-2.56□□□□□ -2.82
NDNQ99608 MIR496-201ENST00000385226 102 ntBASIC-2.56□□□□□ -2.82
NDNQ99608 SNORD113-4-201ENST00000364802 75 ntBASIC-2.57□□□□□ -2.82
NDNQ99608 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
NDNQ99608 FTX_4.1-201ENST00000616291 147 ntBASIC-2.57□□□□□ -2.82
NDNQ99608 RNU4-33P-201ENST00000364316 85 ntBASIC-2.58□□□□□ -2.82
NDNQ99608 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.59□□□□□ -2.82
NDNQ99608 MIR3139-201ENST00000579145 76 ntBASIC-2.6□□□□□ -2.83
NDNQ99608 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.61□□□□□ -2.83
NDNQ99608 AC139453.2-201ENST00000487255 133 ntBASIC-2.61□□□□□ -2.83
NDNQ99608 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.62□□□□□ -2.83
NDNQ99608 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.62□□□□□ -2.83
NDNQ99608 MIR4748-201ENST00000578076 82 ntBASIC-2.62□□□□□ -2.83
NDNQ99608 MIR4317-201ENST00000637586 65 ntBASIC-2.62□□□□□ -2.83
NDNQ99608 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.64□□□□□ -2.83
NDNQ99608 RNA5SP405-201ENST00000363059 114 ntBASIC-2.66□□□□□ -2.84
NDNQ99608 SNORD113-3-201ENST00000364830 72 ntBASIC-2.66□□□□□ -2.84
NDNQ99608 AC079150.2-201ENST00000443733 78 ntBASIC-2.66□□□□□ -2.84
NDNQ99608 RNU6-822P-201ENST00000362707 106 ntBASIC-2.67□□□□□ -2.84
NDNQ99608 RNU6-194P-201ENST00000363862 105 ntBASIC-2.67□□□□□ -2.84
NDNQ99608 MIR548AL-201ENST00000578416 97 ntBASIC-2.68□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms