Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.42□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.42□□□□□ -2.64
PRPF38AQ8NAV1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.42□□□□□ -2.64
PRPF38AQ8NAV1 MIR7978-201ENST00000636158 59 ntBASIC-1.42□□□□□ -2.64
PRPF38AQ8NAV1 SNORD18C-201ENST00000362704 69 ntBASIC-1.43□□□□□ -2.64
PRPF38AQ8NAV1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.43□□□□□ -2.64
PRPF38AQ8NAV1 MT-TM-201ENST00000387377 68 ntBASIC-1.43□□□□□ -2.64
PRPF38AQ8NAV1 AC097484.2-201ENST00000509147 251 ntBASIC-1.43□□□□□ -2.64
PRPF38AQ8NAV1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.43□□□□□ -2.64
PRPF38AQ8NAV1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.43□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.44□□□□□ -2.64
PRPF38AQ8NAV1 MIR581-201ENST00000384895 96 ntBASIC-1.44□□□□□ -2.64
PRPF38AQ8NAV1 MIR125B1-201ENST00000385236 88 ntBASIC-1.44□□□□□ -2.64
PRPF38AQ8NAV1 RNY4-201ENST00000516507 96 ntBASIC-1.44□□□□□ -2.64
PRPF38AQ8NAV1 RNA5SP93-201ENST00000362525 114 ntBASIC-1.45□□□□□ -2.64
PRPF38AQ8NAV1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.45□□□□□ -2.64
PRPF38AQ8NAV1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.46□□□□□ -2.64
PRPF38AQ8NAV1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
PRPF38AQ8NAV1 RNU6-663P-201ENST00000391105 106 ntBASIC-1.47□□□□□ -2.64
PRPF38AQ8NAV1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.48□□□□□ -2.65
PRPF38AQ8NAV1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.48□□□□□ -2.65
PRPF38AQ8NAV1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.48□□□□□ -2.65
PRPF38AQ8NAV1 SNORD60-201ENST00000383903 83 ntBASIC-1.49□□□□□ -2.65
PRPF38AQ8NAV1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.49□□□□□ -2.65
PRPF38AQ8NAV1 MIR202-201ENST00000362219 110 ntBASIC-1.5□□□□□ -2.65
PRPF38AQ8NAV1 RNY4P9-201ENST00000363194 97 ntBASIC-1.5□□□□□ -2.65
PRPF38AQ8NAV1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.5□□□□□ -2.65
PRPF38AQ8NAV1 MIR548N-201ENST00000408742 75 ntBASIC-1.5□□□□□ -2.65
PRPF38AQ8NAV1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.51□□□□□ -2.65
PRPF38AQ8NAV1 MIR4662A-201ENST00000637499 67 ntBASIC-1.52□□□□□ -2.65
PRPF38AQ8NAV1 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 RNU7-160P-201ENST00000516660 62 ntBASIC-1.53□□□□□ -2.65
PRPF38AQ8NAV1 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.54□□□□□ -2.66
PRPF38AQ8NAV1 SNORA17.4-201ENST00000391287 132 ntBASIC-1.54□□□□□ -2.66
PRPF38AQ8NAV1 RNA5SP225-201ENST00000410874 135 ntBASIC-1.54□□□□□ -2.66
PRPF38AQ8NAV1 RNU6-828P-201ENST00000364876 107 ntBASIC-1.55□□□□□ -2.66
PRPF38AQ8NAV1 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.55□□□□□ -2.66
PRPF38AQ8NAV1 SNORD30.1-201ENST00000391309 70 ntBASIC-1.55□□□□□ -2.66
PRPF38AQ8NAV1 RNU6-92P-201ENST00000605893 104 ntBASIC-1.55□□□□□ -2.66
PRPF38AQ8NAV1 RNU6-361P-201ENST00000364454 107 ntBASIC-1.56□□□□□ -2.66
PRPF38AQ8NAV1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.56□□□□□ -2.66
PRPF38AQ8NAV1 SNORA25.4-201ENST00000363666 124 ntBASIC-1.57□□□□□ -2.66
PRPF38AQ8NAV1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.57□□□□□ -2.66
PRPF38AQ8NAV1 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.57□□□□□ -2.66
PRPF38AQ8NAV1 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.57□□□□□ -2.66
PRPF38AQ8NAV1 RNU6-810P-201ENST00000364001 107 ntBASIC-1.58□□□□□ -2.66
PRPF38AQ8NAV1 RNU6-68P-201ENST00000516576 104 ntBASIC-1.58□□□□□ -2.66
PRPF38AQ8NAV1 MIR7110-201ENST00000612638 86 ntBASIC-1.58□□□□□ -2.66
PRPF38AQ8NAV1 MIR379-201ENST00000362218 67 ntBASIC-1.6□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-530P-201ENST00000391180 107 ntBASIC-1.6□□□□□ -2.67
PRPF38AQ8NAV1 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.6□□□□□ -2.67
PRPF38AQ8NAV1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.6□□□□□ -2.67
PRPF38AQ8NAV1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.61□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-230P-201ENST00000362457 104 ntBASIC-1.62□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.62□□□□□ -2.67
PRPF38AQ8NAV1 SNORA72.7-201ENST00000516349 94 ntBASIC-1.62□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-539P-201ENST00000516665 103 ntBASIC-1.62□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-231P-201ENST00000517122 103 ntBASIC-1.62□□□□□ -2.67
PRPF38AQ8NAV1 SNORD60.1-201ENST00000362451 73 ntBASIC-1.63□□□□□ -2.67
PRPF38AQ8NAV1 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.63□□□□□ -2.67
PRPF38AQ8NAV1 SNORD116.2-201ENST00000391251 93 ntBASIC-1.63□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.64□□□□□ -2.67
PRPF38AQ8NAV1 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.64□□□□□ -2.67
PRPF38AQ8NAV1 MIR4426-201ENST00000640330 63 ntBASIC-1.64□□□□□ -2.67
PRPF38AQ8NAV1 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.65□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-776P-201ENST00000364403 104 ntBASIC-1.65□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.65□□□□□ -2.67
PRPF38AQ8NAV1 MIR1254-1-201ENST00000408257 97 ntBASIC-1.65□□□□□ -2.67
PRPF38AQ8NAV1 RNU6-590P-201ENST00000365039 107 ntBASIC-1.66□□□□□ -2.68
PRPF38AQ8NAV1 SNORA40B-201ENST00000385573 128 ntBASIC-1.66□□□□□ -2.68
PRPF38AQ8NAV1 RNU6-300P-201ENST00000459080 104 ntBASIC-1.66□□□□□ -2.68
PRPF38AQ8NAV1 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.67□□□□□ -2.68
PRPF38AQ8NAV1 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.67□□□□□ -2.68
PRPF38AQ8NAV1 SNORD45.2-201ENST00000363552 72 ntBASIC-1.68□□□□□ -2.68
PRPF38AQ8NAV1 AL451105.1-201ENST00000450005 189 ntBASIC-1.68□□□□□ -2.68
PRPF38AQ8NAV1 RNU6-176P-201ENST00000517196 105 ntBASIC-1.68□□□□□ -2.68
PRPF38AQ8NAV1 SNORA40.16-201ENST00000517238 121 ntBASIC-1.68□□□□□ -2.68
PRPF38AQ8NAV1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.69□□□□□ -2.68
PRPF38AQ8NAV1 U6.111-201ENST00000636093 83 ntBASIC-1.69□□□□□ -2.68
PRPF38AQ8NAV1 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.71□□□□□ -2.68
PRPF38AQ8NAV1 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.71□□□□□ -2.68
PRPF38AQ8NAV1 RNU6-345P-201ENST00000517001 107 ntBASIC-1.71□□□□□ -2.68
PRPF38AQ8NAV1 MIR5693-201ENST00000577722 73 ntBASIC-1.71□□□□□ -2.68
PRPF38AQ8NAV1 AL731768.1-201ENST00000603124 139 ntBASIC-1.71□□□□□ -2.68
PRPF38AQ8NAV1 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.72□□□□□ -2.68
PRPF38AQ8NAV1 AC103706.3-201ENST00000636297 85 ntBASIC-1.72□□□□□ -2.68
PRPF38AQ8NAV1 RNY4P25-201ENST00000459254 96 ntBASIC-1.73□□□□□ -2.69
PRPF38AQ8NAV1 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms