Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IGLVI-20-201ENST00000519296 130 ntBASIC0.09□□□□□ -2.4
NPAS3Q8IXF0 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
NPAS3Q8IXF0 RNA5SP368-201ENST00000364298 116 ntBASIC0.08□□□□□ -2.4
NPAS3Q8IXF0 MIR147A-201ENST00000385079 72 ntBASIC0.08□□□□□ -2.4
NPAS3Q8IXF0 RNU6-284P-201ENST00000411105 106 ntBASIC0.08□□□□□ -2.4
NPAS3Q8IXF0 MIR4667-201ENST00000578933 66 ntBASIC0.08□□□□□ -2.4
NPAS3Q8IXF0 MIR6874-201ENST00000635894 71 ntBASIC0.08□□□□□ -2.4
NPAS3Q8IXF0 RNA5SP300-201ENST00000391197 107 ntBASIC0.07□□□□□ -2.4
NPAS3Q8IXF0 RNU6-758P-201ENST00000516292 89 ntBASIC0.07□□□□□ -2.4
NPAS3Q8IXF0 AP001180.6-201ENST00000584918 159 ntBASIC0.07□□□□□ -2.4
NPAS3Q8IXF0 RNU6-1034P-201ENST00000365335 101 ntBASIC0.06□□□□□ -2.4
NPAS3Q8IXF0 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
NPAS3Q8IXF0 SNORD4A-201ENST00000459174 72 ntBASIC0.05□□□□□ -2.4
NPAS3Q8IXF0 MIR409-201ENST00000362237 79 ntBASIC0.04□□□□□ -2.4
NPAS3Q8IXF0 SNORD95.1-201ENST00000364099 68 ntBASIC0.04□□□□□ -2.4
NPAS3Q8IXF0 Y_RNA.349-201ENST00000365406 102 ntBASIC0.04□□□□□ -2.4
NPAS3Q8IXF0 SNORA3B-201ENST00000391305 131 ntBASIC0.04□□□□□ -2.4
NPAS3Q8IXF0 SNORD113-3-201ENST00000364830 72 ntBASIC0.03□□□□□ -2.4
NPAS3Q8IXF0 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
NPAS3Q8IXF0 SNORD114-25-201ENST00000363742 72 ntBASIC0.02□□□□□ -2.41
NPAS3Q8IXF0 snoU83B.1-201ENST00000517136 88 ntBASIC0.02□□□□□ -2.41
NPAS3Q8IXF0 MIR604-201ENST00000384880 94 ntBASIC0.01□□□□□ -2.41
NPAS3Q8IXF0 snoU13.10-201ENST00000459301 103 ntBASIC0.01□□□□□ -2.41
NPAS3Q8IXF0 Y_RNA.63-201ENST00000362841 102 ntBASIC0□□□□□ -2.41
NPAS3Q8IXF0 MIR101-1-201ENST00000362265 75 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 SNORD114-15-201ENST00000364687 72 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 RNU6-422P-201ENST00000384632 107 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 MIR3681-201ENST00000580089 72 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 MIR4436A-201ENST00000585278 85 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 AC091912.2-201ENST00000624798 167 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 MIR382-201ENST00000637119 76 ntBASIC-0.01□□□□□ -2.41
NPAS3Q8IXF0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
NPAS3Q8IXF0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.02□□□□□ -2.41
NPAS3Q8IXF0 MIR214-201ENST00000385214 110 ntBASIC-0.03□□□□□ -2.41
NPAS3Q8IXF0 MIR1295B-201ENST00000636144 60 ntBASIC-0.03□□□□□ -2.41
NPAS3Q8IXF0 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.05□□□□□ -2.42
NPAS3Q8IXF0 MIR8064-201ENST00000612863 90 ntBASIC-0.05□□□□□ -2.42
NPAS3Q8IXF0 MIR548W-201ENST00000581970 74 ntBASIC-0.06□□□□□ -2.42
NPAS3Q8IXF0 RNU6-576P-201ENST00000390854 102 ntBASIC-0.07□□□□□ -2.42
NPAS3Q8IXF0 RNU6-854P-201ENST00000364036 107 ntBASIC-0.08□□□□□ -2.42
NPAS3Q8IXF0 RNA5SP266-201ENST00000410273 108 ntBASIC-0.08□□□□□ -2.42
NPAS3Q8IXF0 MIR3123-201ENST00000583417 75 ntBASIC-0.09□□□□□ -2.42
NPAS3Q8IXF0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.11□□□□□ -2.43
NPAS3Q8IXF0 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.12□□□□□ -2.43
NPAS3Q8IXF0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.12□□□□□ -2.43
NPAS3Q8IXF0 RNU6-400P-201ENST00000391173 106 ntBASIC-0.12□□□□□ -2.43
NPAS3Q8IXF0 RNU6-1043P-201ENST00000410355 99 ntBASIC-0.13□□□□□ -2.43
NPAS3Q8IXF0 MIR548AX-201ENST00000580117 73 ntBASIC-0.14□□□□□ -2.43
NPAS3Q8IXF0 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.15□□□□□ -2.43
NPAS3Q8IXF0 MIR196A2-201ENST00000385189 110 ntBASIC-0.15□□□□□ -2.43
NPAS3Q8IXF0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.15□□□□□ -2.43
NPAS3Q8IXF0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.15□□□□□ -2.43
NPAS3Q8IXF0 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.16□□□□□ -2.44
NPAS3Q8IXF0 RNU6-983P-201ENST00000516004 103 ntBASIC-0.18□□□□□ -2.44
NPAS3Q8IXF0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.19□□□□□ -2.44
NPAS3Q8IXF0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.19□□□□□ -2.44
NPAS3Q8IXF0 RPS29P8-201ENST00000445109 171 ntBASIC-0.19□□□□□ -2.44
NPAS3Q8IXF0 SNORD126-201ENST00000459475 77 ntBASIC-0.2□□□□□ -2.44
NPAS3Q8IXF0 MIR224-201ENST00000384889 81 ntBASIC-0.21□□□□□ -2.44
NPAS3Q8IXF0 MIR8485-201ENST00000401372 91 ntBASIC-0.21□□□□□ -2.44
NPAS3Q8IXF0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.24□□□□□ -2.45
NPAS3Q8IXF0 RNU6-627P-201ENST00000364032 102 ntBASIC-0.24□□□□□ -2.45
NPAS3Q8IXF0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.24□□□□□ -2.45
NPAS3Q8IXF0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.24□□□□□ -2.45
NPAS3Q8IXF0 RNU6-737P-201ENST00000365370 107 ntBASIC-0.25□□□□□ -2.45
NPAS3Q8IXF0 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 AC097484.2-201ENST00000509147 251 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.26□□□□□ -2.45
NPAS3Q8IXF0 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.27□□□□□ -2.45
NPAS3Q8IXF0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.29□□□□□ -2.46
NPAS3Q8IXF0 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.3□□□□□ -2.46
NPAS3Q8IXF0 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
NPAS3Q8IXF0 MIR4723-201ENST00000585070 81 ntBASIC-0.3□□□□□ -2.46
NPAS3Q8IXF0 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.31□□□□□ -2.46
NPAS3Q8IXF0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.31□□□□□ -2.46
NPAS3Q8IXF0 SNX3P1X-201ENST00000414887 175 ntBASIC-0.32□□□□□ -2.46
NPAS3Q8IXF0 RNU6-841P-201ENST00000383872 107 ntBASIC-0.34□□□□□ -2.46
NPAS3Q8IXF0 MT-TQ-201ENST00000387372 72 ntBASIC-0.34□□□□□ -2.46
NPAS3Q8IXF0 MIR548AM-201ENST00000584298 74 ntBASIC-0.34□□□□□ -2.46
NPAS3Q8IXF0 MIR124-1-201ENST00000385275 85 ntBASIC-0.36□□□□□ -2.47
NPAS3Q8IXF0 uc_338.19-201ENST00000616808 99 ntBASIC-0.36□□□□□ -2.47
NPAS3Q8IXF0 MIR198-201ENST00000637333 62 ntBASIC-0.36□□□□□ -2.47
NPAS3Q8IXF0 RNA5SP461-201ENST00000516451 104 ntBASIC-0.37□□□□□ -2.47
NPAS3Q8IXF0 MIR196A1-201ENST00000388006 70 ntBASIC-0.38□□□□□ -2.47
NPAS3Q8IXF0 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.38□□□□□ -2.47
NPAS3Q8IXF0 MIR4499-201ENST00000584834 69 ntBASIC-0.38□□□□□ -2.47
NPAS3Q8IXF0 MIR4324-201ENST00000584846 72 ntBASIC-0.39□□□□□ -2.47
NPAS3Q8IXF0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.4□□□□□ -2.47
NPAS3Q8IXF0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.42□□□□□ -2.48
NPAS3Q8IXF0 MIR6738-201ENST00000619620 64 ntBASIC-0.42□□□□□ -2.48
NPAS3Q8IXF0 RNU6-10P-201ENST00000384036 107 ntBASIC-0.43□□□□□ -2.48
NPAS3Q8IXF0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.43□□□□□ -2.48
NPAS3Q8IXF0 MIR487B-201ENST00000385021 84 ntBASIC-0.44□□□□□ -2.48
NPAS3Q8IXF0 MIR4520-1-201ENST00000582609 70 ntBASIC-0.45□□□□□ -2.48
NPAS3Q8IXF0 MIR6502-201ENST00000617296 76 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms