Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-665P-201ENST00000384639 107 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 MALAT1.1-201ENST00000618249 95 ntBASIC-3.88□□□□□ -3.03
USP54Q70EL1 RNU6-327P-201ENST00000516270 127 ntBASIC-3.89□□□□□ -3.03
USP54Q70EL1 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.9□□□□□ -3.03
USP54Q70EL1 SNORA63-201ENST00000363450 132 ntBASIC-3.9□□□□□ -3.03
USP54Q70EL1 RNU6-346P-201ENST00000516288 111 ntBASIC-3.9□□□□□ -3.03
USP54Q70EL1 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.9□□□□□ -3.03
USP54Q70EL1 RNU6-742P-201ENST00000365289 107 ntBASIC-3.9□□□□□ -3.03
USP54Q70EL1 SNORA40.16-201ENST00000517238 121 ntBASIC-3.9□□□□□ -3.03
USP54Q70EL1 RNU6-940P-201ENST00000363433 104 ntBASIC-3.91□□□□□ -3.04
USP54Q70EL1 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.91□□□□□ -3.04
USP54Q70EL1 RNY1P5-201ENST00000383890 115 ntBASIC-3.91□□□□□ -3.04
USP54Q70EL1 RNU6-737P-201ENST00000365370 107 ntBASIC-3.92□□□□□ -3.04
USP54Q70EL1 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.93□□□□□ -3.04
USP54Q70EL1 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.94□□□□□ -3.04
USP54Q70EL1 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.94□□□□□ -3.04
USP54Q70EL1 AL031737.1-201ENST00000450125 223 ntBASIC-3.95□□□□□ -3.04
USP54Q70EL1 IGLL4P-201ENST00000614590 133 ntBASIC-3.95□□□□□ -3.04
USP54Q70EL1 MT-TG-201ENST00000387429 68 ntBASIC-3.97□□□□□ -3.04
USP54Q70EL1 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.97□□□□□ -3.04
USP54Q70EL1 RNY4P13-201ENST00000384284 96 ntBASIC-3.97□□□□□ -3.05
USP54Q70EL1 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.97□□□□□ -3.05
USP54Q70EL1 RNU6-589P-201ENST00000516485 107 ntBASIC-3.98□□□□□ -3.05
USP54Q70EL1 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.99□□□□□ -3.05
USP54Q70EL1 MIR1245B-201ENST00000636115 69 ntBASIC-3.99□□□□□ -3.05
USP54Q70EL1 RNU6-687P-201ENST00000516443 89 ntBASIC-4□□□□□ -3.05
USP54Q70EL1 SNORD115-45-201ENST00000391078 81 ntBASIC-4□□□□□ -3.05
USP54Q70EL1 MIR4317-201ENST00000637586 65 ntBASIC-4□□□□□ -3.05
USP54Q70EL1 MIR3938-201ENST00000582157 103 ntBASIC-4.01□□□□□ -3.05
USP54Q70EL1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.02□□□□□ -3.05
USP54Q70EL1 RNU6-979P-201ENST00000383896 107 ntBASIC-4.03□□□□□ -3.05
USP54Q70EL1 RNU6-959P-201ENST00000384671 107 ntBASIC-4.03□□□□□ -3.05
USP54Q70EL1 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.03□□□□□ -3.05
USP54Q70EL1 RNU6-122P-201ENST00000516818 107 ntBASIC-4.03□□□□□ -3.05
USP54Q70EL1 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.03□□□□□ -3.06
USP54Q70EL1 MIR3134-201ENST00000579433 74 ntBASIC-4.03□□□□□ -3.06
USP54Q70EL1 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.04□□□□□ -3.06
USP54Q70EL1 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.04□□□□□ -3.06
USP54Q70EL1 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.05□□□□□ -3.06
USP54Q70EL1 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.05□□□□□ -3.06
USP54Q70EL1 MIR450A1-201ENST00000362262 91 ntBASIC-4.06□□□□□ -3.06
USP54Q70EL1 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.06□□□□□ -3.06
USP54Q70EL1 RNU6-463P-201ENST00000384340 107 ntBASIC-4.06□□□□□ -3.06
USP54Q70EL1 RNU6-663P-201ENST00000391105 106 ntBASIC-4.06□□□□□ -3.06
USP54Q70EL1 MIR124-1-201ENST00000385275 85 ntBASIC-4.07□□□□□ -3.06
USP54Q70EL1 AC008267.6-201ENST00000441664 139 ntBASIC-4.07□□□□□ -3.06
USP54Q70EL1 RNU7-171P-201ENST00000459581 62 ntBASIC-4.07□□□□□ -3.06
USP54Q70EL1 RNU6-844P-201ENST00000517175 102 ntBASIC-4.07□□□□□ -3.06
USP54Q70EL1 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.09□□□□□ -3.06
USP54Q70EL1 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.1□□□□□ -3.07
USP54Q70EL1 RNU6-411P-201ENST00000384451 107 ntBASIC-4.1□□□□□ -3.07
USP54Q70EL1 U7.4-201ENST00000614961 63 ntBASIC-4.1□□□□□ -3.07
USP54Q70EL1 MIR548X-201ENST00000580069 75 ntBASIC-4.1□□□□□ -3.07
USP54Q70EL1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.12□□□□□ -3.07
USP54Q70EL1 MIR5588-201ENST00000581890 63 ntBASIC-4.13□□□□□ -3.07
USP54Q70EL1 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.14□□□□□ -3.07
USP54Q70EL1 AC139453.2-201ENST00000487255 133 ntBASIC-4.16□□□□□ -3.07
USP54Q70EL1 MIR4712-201ENST00000583750 82 ntBASIC-4.16□□□□□ -3.07
USP54Q70EL1 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.16□□□□□ -3.08
USP54Q70EL1 SNORA25.4-201ENST00000363666 124 ntBASIC-4.18□□□□□ -3.08
USP54Q70EL1 MIR488-201ENST00000365739 83 ntBASIC-4.18□□□□□ -3.08
USP54Q70EL1 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.19□□□□□ -3.08
USP54Q70EL1 MIR656-201ENST00000385224 78 ntBASIC-4.19□□□□□ -3.08
USP54Q70EL1 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.2□□□□□ -3.08
USP54Q70EL1 RNU6-634P-201ENST00000459134 106 ntBASIC-4.2□□□□□ -3.08
USP54Q70EL1 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.2□□□□□ -3.08
USP54Q70EL1 RNA5SP224-201ENST00000365069 126 ntBASIC-4.22□□□□□ -3.08
USP54Q70EL1 MIR4511-201ENST00000582784 87 ntBASIC-4.22□□□□□ -3.08
USP54Q70EL1 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.22□□□□□ -3.09
USP54Q70EL1 AC103706.3-201ENST00000636297 85 ntBASIC-4.24□□□□□ -3.09
USP54Q70EL1 SNORD45C-201ENST00000383893 79 ntBASIC-4.25□□□□□ -3.09
USP54Q70EL1 SNORD30.1-201ENST00000391309 70 ntBASIC-4.26□□□□□ -3.09
USP54Q70EL1 RNU6-836P-201ENST00000362920 107 ntBASIC-4.26□□□□□ -3.09
USP54Q70EL1 RNU6-1168P-201ENST00000390831 104 ntBASIC-4.26□□□□□ -3.09
USP54Q70EL1 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.26□□□□□ -3.09
USP54Q70EL1 RNU6-854P-201ENST00000364036 107 ntBASIC-4.28□□□□□ -3.09
USP54Q70EL1 AL365222.1-201ENST00000614661 98 ntBASIC-4.29□□□□□ -3.1
USP54Q70EL1 RNU6-32P-201ENST00000383948 107 ntBASIC-4.3□□□□□ -3.1
USP54Q70EL1 RNU6-13P-201ENST00000384248 107 ntBASIC-4.3□□□□□ -3.1
USP54Q70EL1 RNU6-12P-201ENST00000384604 107 ntBASIC-4.3□□□□□ -3.1
USP54Q70EL1 RNU6-41P-201ENST00000384741 107 ntBASIC-4.3□□□□□ -3.1
USP54Q70EL1 SNORD115.2-201ENST00000391126 59 ntBASIC-4.3□□□□□ -3.1
USP54Q70EL1 MIR4679-1-201ENST00000637619 75 ntBASIC-4.3□□□□□ -3.1
USP54Q70EL1 RNU6-640P-201ENST00000363693 105 ntBASIC-4.31□□□□□ -3.1
USP54Q70EL1 MIR548AH-201ENST00000637109 76 ntBASIC-4.31□□□□□ -3.1
USP54Q70EL1 RNU6-81P-201ENST00000365608 104 ntBASIC-4.32□□□□□ -3.1
USP54Q70EL1 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.34□□□□□ -3.1
USP54Q70EL1 MIR4666B-201ENST00000578142 81 ntBASIC-4.35□□□□□ -3.11
USP54Q70EL1 RNU6-22P-201ENST00000384355 107 ntBASIC-4.35□□□□□ -3.11
USP54Q70EL1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-4.37□□□□□ -3.11
USP54Q70EL1 Y_RNA.703-201ENST00000516846 111 ntBASIC-4.38□□□□□ -3.11
USP54Q70EL1 RNU6-776P-201ENST00000364403 104 ntBASIC-4.38□□□□□ -3.11
USP54Q70EL1 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.38□□□□□ -3.11
USP54Q70EL1 RNU6-1276P-201ENST00000365372 104 ntBASIC-4.38□□□□□ -3.11
USP54Q70EL1 MIR450A2-201ENST00000385022 100 ntBASIC-4.38□□□□□ -3.11
USP54Q70EL1 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.39□□□□□ -3.11
USP54Q70EL1 RNU6-242P-201ENST00000384359 107 ntBASIC-4.39□□□□□ -3.11
USP54Q70EL1 RNU6-1011P-201ENST00000384668 107 ntBASIC-4.39□□□□□ -3.11
USP54Q70EL1 AC110620.1-201ENST00000416042 228 ntBASIC-4.4□□□□□ -3.11
USP54Q70EL1 RNU6-871P-201ENST00000516122 100 ntBASIC-4.41□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms