Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RNU6-687P-201ENST00000516443 89 ntBASIC-5.15□□□□□ -3.23
UBR3Q6ZT12 Y_RNA.297-201ENST00000364950 91 ntBASIC-5.15□□□□□ -3.23
UBR3Q6ZT12 MIR548AL-201ENST00000578416 97 ntBASIC-5.17□□□□□ -3.24
UBR3Q6ZT12 Y_RNA.138-201ENST00000363462 102 ntBASIC-5.19□□□□□ -3.24
UBR3Q6ZT12 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.2□□□□□ -3.24
UBR3Q6ZT12 MIR3134-201ENST00000579433 74 ntBASIC-5.2□□□□□ -3.24
UBR3Q6ZT12 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.2□□□□□ -3.24
UBR3Q6ZT12 SNORA25.4-201ENST00000363666 124 ntBASIC-5.21□□□□□ -3.24
UBR3Q6ZT12 Y_RNA.343-201ENST00000365354 112 ntBASIC-5.21□□□□□ -3.24
UBR3Q6ZT12 RNU6-804P-201ENST00000384286 107 ntBASIC-5.22□□□□□ -3.24
UBR3Q6ZT12 Y_RNA.460-201ENST00000384255 102 ntBASIC-5.22□□□□□ -3.25
UBR3Q6ZT12 MTATP8P1-201ENST00000467115 207 ntBASIC-5.22□□□□□ -3.25
UBR3Q6ZT12 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.24□□□□□ -3.25
UBR3Q6ZT12 MALAT1.1-201ENST00000618249 95 ntBASIC-5.24□□□□□ -3.25
UBR3Q6ZT12 MTND5P41-201ENST00000517498 206 ntBASIC-5.24□□□□□ -3.25
UBR3Q6ZT12 RNU6-379P-201ENST00000363813 104 ntBASIC-5.25□□□□□ -3.25
UBR3Q6ZT12 RNU6-979P-201ENST00000383896 107 ntBASIC-5.25□□□□□ -3.25
UBR3Q6ZT12 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.26□□□□□ -3.25
UBR3Q6ZT12 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.26□□□□□ -3.25
UBR3Q6ZT12 MIR4511-201ENST00000582784 87 ntBASIC-5.26□□□□□ -3.25
UBR3Q6ZT12 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.26□□□□□ -3.25
UBR3Q6ZT12 AC062037.2-201ENST00000610137 73 ntBASIC-5.26□□□□□ -3.25
UBR3Q6ZT12 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-5.26□□□□□ -3.25
UBR3Q6ZT12 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.27□□□□□ -3.25
UBR3Q6ZT12 MIR548F4-201ENST00000408515 105 ntBASIC-5.27□□□□□ -3.25
UBR3Q6ZT12 RNU6-255P-201ENST00000516957 105 ntBASIC-5.27□□□□□ -3.25
UBR3Q6ZT12 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.28□□□□□ -3.25
UBR3Q6ZT12 RNU6-808P-201ENST00000391233 108 ntBASIC-5.28□□□□□ -3.26
UBR3Q6ZT12 SNORA40.13-201ENST00000516379 120 ntBASIC-5.28□□□□□ -3.26
UBR3Q6ZT12 U6atac.1-201ENST00000616025 117 ntBASIC-5.28□□□□□ -3.26
UBR3Q6ZT12 MIR1245B-201ENST00000636115 69 ntBASIC-5.28□□□□□ -3.26
UBR3Q6ZT12 RNU6-959P-201ENST00000384671 107 ntBASIC-5.29□□□□□ -3.26
UBR3Q6ZT12 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.3□□□□□ -3.26
UBR3Q6ZT12 MIR4760-201ENST00000585040 80 ntBASIC-5.3□□□□□ -3.26
UBR3Q6ZT12 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.31□□□□□ -3.26
UBR3Q6ZT12 AL117187.1-201ENST00000555482 181 ntBASIC-5.32□□□□□ -3.26
UBR3Q6ZT12 MIR4712-201ENST00000583750 82 ntBASIC-5.32□□□□□ -3.26
UBR3Q6ZT12 AL353621.2-201ENST00000605340 133 ntBASIC-5.32□□□□□ -3.26
UBR3Q6ZT12 RNU6-623P-201ENST00000363143 105 ntBASIC-5.33□□□□□ -3.26
UBR3Q6ZT12 RNU6-634P-201ENST00000459134 106 ntBASIC-5.34□□□□□ -3.26
UBR3Q6ZT12 MT-TD-201ENST00000387419 68 ntBASIC-5.38□□□□□ -3.27
UBR3Q6ZT12 AC103706.3-201ENST00000636297 85 ntBASIC-5.39□□□□□ -3.27
UBR3Q6ZT12 RNU7-171P-201ENST00000459581 62 ntBASIC-5.4□□□□□ -3.27
UBR3Q6ZT12 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.41□□□□□ -3.27
UBR3Q6ZT12 RNU6-844P-201ENST00000517175 102 ntBASIC-5.41□□□□□ -3.27
UBR3Q6ZT12 MTND5P20-201ENST00000448677 143 ntBASIC-5.41□□□□□ -3.28
UBR3Q6ZT12 RNU4-33P-201ENST00000364316 85 ntBASIC-5.42□□□□□ -3.28
UBR3Q6ZT12 AC090425.1-201ENST00000610007 140 ntBASIC-5.43□□□□□ -3.28
UBR3Q6ZT12 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.44□□□□□ -3.28
UBR3Q6ZT12 MIR5588-201ENST00000581890 63 ntBASIC-5.45□□□□□ -3.28
UBR3Q6ZT12 AC110620.1-201ENST00000416042 228 ntBASIC-5.46□□□□□ -3.28
UBR3Q6ZT12 U7.4-201ENST00000614961 63 ntBASIC-5.46□□□□□ -3.28
UBR3Q6ZT12 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.47□□□□□ -3.28
UBR3Q6ZT12 SNORD30.1-201ENST00000391309 70 ntBASIC-5.49□□□□□ -3.29
UBR3Q6ZT12 Y_RNA.149-201ENST00000363558 117 ntBASIC-5.5□□□□□ -3.29
UBR3Q6ZT12 MIR450A1-201ENST00000362262 91 ntBASIC-5.51□□□□□ -3.29
UBR3Q6ZT12 RNU7-200P-201ENST00000516105 62 ntBASIC-5.51□□□□□ -3.29
UBR3Q6ZT12 MIR4679-1-201ENST00000637619 75 ntBASIC-5.51□□□□□ -3.29
UBR3Q6ZT12 SNORD116-14-201ENST00000383894 92 ntBASIC-5.52□□□□□ -3.29
UBR3Q6ZT12 SNORD116-17-201ENST00000383929 92 ntBASIC-5.52□□□□□ -3.29
UBR3Q6ZT12 SNORD116-15-201ENST00000384445 92 ntBASIC-5.52□□□□□ -3.29
UBR3Q6ZT12 SNORD116-19-201ENST00000384729 92 ntBASIC-5.52□□□□□ -3.29
UBR3Q6ZT12 AL031737.1-201ENST00000450125 223 ntBASIC-5.52□□□□□ -3.29
UBR3Q6ZT12 IGLL4P-201ENST00000614590 133 ntBASIC-5.52□□□□□ -3.29
UBR3Q6ZT12 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.53□□□□□ -3.29
UBR3Q6ZT12 RNU6-589P-201ENST00000516485 107 ntBASIC-5.53□□□□□ -3.29
UBR3Q6ZT12 RNU6-627P-201ENST00000364032 102 ntBASIC-5.54□□□□□ -3.3
UBR3Q6ZT12 RNU6-200P-201ENST00000364743 107 ntBASIC-5.54□□□□□ -3.3
UBR3Q6ZT12 RNU6-1160P-201ENST00000384546 104 ntBASIC-5.54□□□□□ -3.3
UBR3Q6ZT12 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.54□□□□□ -3.3
UBR3Q6ZT12 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.56□□□□□ -3.3
UBR3Q6ZT12 MTCYBP9-201ENST00000431021 303 ntBASIC-5.56□□□□□ -3.3
UBR3Q6ZT12 MIR488-201ENST00000365739 83 ntBASIC-5.56□□□□□ -3.3
UBR3Q6ZT12 RNU6-209P-201ENST00000384118 107 ntBASIC-5.56□□□□□ -3.3
UBR3Q6ZT12 AC008737.2-201ENST00000599446 118 ntBASIC-5.58□□□□□ -3.3
UBR3Q6ZT12 MIR1302-3-201ENST00000408128 138 ntBASIC-5.59□□□□□ -3.3
UBR3Q6ZT12 MIR568-201ENST00000385036 95 ntBASIC-5.6□□□□□ -3.31
UBR3Q6ZT12 Y_RNA.422-201ENST00000384054 114 ntBASIC-5.61□□□□□ -3.31
UBR3Q6ZT12 MTCYBP6-201ENST00000441810 138 ntBASIC-5.62□□□□□ -3.31
UBR3Q6ZT12 RNU6-539P-201ENST00000516665 103 ntBASIC-5.64□□□□□ -3.31
UBR3Q6ZT12 RNU6-59P-201ENST00000384787 107 ntBASIC-5.64□□□□□ -3.31
UBR3Q6ZT12 Y_RNA.489-201ENST00000384410 101 ntBASIC-5.65□□□□□ -3.31
UBR3Q6ZT12 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.67□□□□□ -3.32
UBR3Q6ZT12 Y_RNA.506-201ENST00000384494 102 ntBASIC-5.68□□□□□ -3.32
UBR3Q6ZT12 AP000770.2-201ENST00000623694 100 ntBASIC-5.68□□□□□ -3.32
UBR3Q6ZT12 AC114801.3-201ENST00000510231 177 ntBASIC-5.69□□□□□ -3.32
UBR3Q6ZT12 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.71□□□□□ -3.32
UBR3Q6ZT12 RNU6-446P-201ENST00000362827 106 ntBASIC-5.71□□□□□ -3.32
UBR3Q6ZT12 Y_RNA.193-201ENST00000363979 102 ntBASIC-5.71□□□□□ -3.32
UBR3Q6ZT12 RNU6-871P-201ENST00000516122 100 ntBASIC-5.72□□□□□ -3.32
UBR3Q6ZT12 Y_RNA.702-201ENST00000516843 96 ntBASIC-5.72□□□□□ -3.32
UBR3Q6ZT12 MIR4666B-201ENST00000578142 81 ntBASIC-5.72□□□□□ -3.32
UBR3Q6ZT12 RNU6-640P-201ENST00000363693 105 ntBASIC-5.73□□□□□ -3.33
UBR3Q6ZT12 MIR606-201ENST00000384851 96 ntBASIC-5.73□□□□□ -3.33
UBR3Q6ZT12 RNU6-346P-201ENST00000516288 111 ntBASIC-5.73□□□□□ -3.33
UBR3Q6ZT12 U6.111-201ENST00000636093 83 ntBASIC-5.73□□□□□ -3.33
UBR3Q6ZT12 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.74□□□□□ -3.33
UBR3Q6ZT12 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.74□□□□□ -3.33
UBR3Q6ZT12 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.75□□□□□ -3.33
UBR3Q6ZT12 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.75□□□□□ -3.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms