Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 snoU83B.1-201ENST00000517136 88 ntBASIC-0.5□□□□□ -2.49
USP39Q53GS9 SNORD18C-201ENST00000362704 69 ntBASIC-0.51□□□□□ -2.49
USP39Q53GS9 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.51□□□□□ -2.49
USP39Q53GS9 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.52□□□□□ -2.49
USP39Q53GS9 RNU6-695P-201ENST00000391157 104 ntBASIC-0.52□□□□□ -2.49
USP39Q53GS9 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.54□□□□□ -2.5
USP39Q53GS9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.54□□□□□ -2.5
USP39Q53GS9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.54□□□□□ -2.5
USP39Q53GS9 MIR548AX-201ENST00000580117 73 ntBASIC-0.55□□□□□ -2.5
USP39Q53GS9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.56□□□□□ -2.5
USP39Q53GS9 MIR379-201ENST00000362218 67 ntBASIC-0.57□□□□□ -2.5
USP39Q53GS9 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.57□□□□□ -2.5
USP39Q53GS9 RNA5SP266-201ENST00000410273 108 ntBASIC-0.57□□□□□ -2.5
USP39Q53GS9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.57□□□□□ -2.5
USP39Q53GS9 AC091912.2-201ENST00000624798 167 ntBASIC-0.57□□□□□ -2.5
USP39Q53GS9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.58□□□□□ -2.5
USP39Q53GS9 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.58□□□□□ -2.5
USP39Q53GS9 MIR6874-201ENST00000635894 71 ntBASIC-0.58□□□□□ -2.5
USP39Q53GS9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.59□□□□□ -2.5
USP39Q53GS9 RNU6-576P-201ENST00000390854 102 ntBASIC-0.61□□□□□ -2.51
USP39Q53GS9 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.63□□□□□ -2.51
USP39Q53GS9 RNU6-912P-201ENST00000363800 104 ntBASIC-0.64□□□□□ -2.51
USP39Q53GS9 MT-TQ-201ENST00000387372 72 ntBASIC-0.64□□□□□ -2.51
USP39Q53GS9 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.65□□□□□ -2.51
USP39Q53GS9 AC138207.3-201ENST00000585289 166 ntBASIC-0.65□□□□□ -2.51
USP39Q53GS9 RNU6-400P-201ENST00000391173 106 ntBASIC-0.67□□□□□ -2.52
USP39Q53GS9 MIR4499-201ENST00000584834 69 ntBASIC-0.67□□□□□ -2.52
USP39Q53GS9 MIR196A1-201ENST00000388006 70 ntBASIC-0.68□□□□□ -2.52
USP39Q53GS9 SNORD115.2-201ENST00000391126 59 ntBASIC-0.68□□□□□ -2.52
USP39Q53GS9 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.68□□□□□ -2.52
USP39Q53GS9 SNORD111B-201ENST00000408587 80 ntBASIC-0.69□□□□□ -2.52
USP39Q53GS9 uc_338.19-201ENST00000616808 99 ntBASIC-0.7□□□□□ -2.52
USP39Q53GS9 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.71□□□□□ -2.52
USP39Q53GS9 MIR3681-201ENST00000580089 72 ntBASIC-0.71□□□□□ -2.52
USP39Q53GS9 RNA5SP224-201ENST00000365069 126 ntBASIC-0.72□□□□□ -2.52
USP39Q53GS9 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.72□□□□□ -2.52
USP39Q53GS9 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.72□□□□□ -2.52
USP39Q53GS9 RNU6-836P-201ENST00000362920 107 ntBASIC-0.73□□□□□ -2.53
USP39Q53GS9 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.73□□□□□ -2.53
USP39Q53GS9 MIR8485-201ENST00000401372 91 ntBASIC-0.74□□□□□ -2.53
USP39Q53GS9 FTX_4.1-201ENST00000616291 147 ntBASIC-0.74□□□□□ -2.53
USP39Q53GS9 RNU6-485P-201ENST00000363475 107 ntBASIC-0.75□□□□□ -2.53
USP39Q53GS9 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.75□□□□□ -2.53
USP39Q53GS9 SNX3P1X-201ENST00000414887 175 ntBASIC-0.75□□□□□ -2.53
USP39Q53GS9 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.76□□□□□ -2.53
USP39Q53GS9 MIR548H1-201ENST00000408610 102 ntBASIC-0.76□□□□□ -2.53
USP39Q53GS9 MIR3123-201ENST00000583417 75 ntBASIC-0.76□□□□□ -2.53
USP39Q53GS9 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.77□□□□□ -2.53
USP39Q53GS9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.77□□□□□ -2.53
USP39Q53GS9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.78□□□□□ -2.53
USP39Q53GS9 SNORD83B-201ENST00000386745 93 ntBASIC-0.78□□□□□ -2.53
USP39Q53GS9 MIR6502-201ENST00000617296 76 ntBASIC-0.78□□□□□ -2.53
USP39Q53GS9 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.8□□□□□ -2.54
USP39Q53GS9 MIR548W-201ENST00000581970 74 ntBASIC-0.8□□□□□ -2.54
USP39Q53GS9 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.82□□□□□ -2.54
USP39Q53GS9 snoU13.10-201ENST00000459301 103 ntBASIC-0.82□□□□□ -2.54
USP39Q53GS9 SNORD45C-201ENST00000383893 79 ntBASIC-0.83□□□□□ -2.54
USP39Q53GS9 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.83□□□□□ -2.54
USP39Q53GS9 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.83□□□□□ -2.54
USP39Q53GS9 MIR1254-1-201ENST00000408257 97 ntBASIC-0.84□□□□□ -2.54
USP39Q53GS9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.85□□□□□ -2.55
USP39Q53GS9 RNU6-133P-201ENST00000383989 107 ntBASIC-0.86□□□□□ -2.55
USP39Q53GS9 RNU6-345P-201ENST00000517001 107 ntBASIC-0.86□□□□□ -2.55
USP39Q53GS9 MIR587-201ENST00000384845 96 ntBASIC-0.87□□□□□ -2.55
USP39Q53GS9 RNU6-841P-201ENST00000383872 107 ntBASIC-0.88□□□□□ -2.55
USP39Q53GS9 SNORD113-3-201ENST00000364830 72 ntBASIC-0.89□□□□□ -2.55
USP39Q53GS9 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.89□□□□□ -2.55
USP39Q53GS9 MIR378F-201ENST00000578143 78 ntBASIC-0.89□□□□□ -2.55
USP39Q53GS9 MIR4723-201ENST00000585070 81 ntBASIC-0.89□□□□□ -2.55
USP39Q53GS9 MIR656-201ENST00000385224 78 ntBASIC-0.9□□□□□ -2.55
USP39Q53GS9 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.91□□□□□ -2.56
USP39Q53GS9 SCARNA17-201ENST00000516183 144 ntBASIC-0.92□□□□□ -2.56
USP39Q53GS9 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.93□□□□□ -2.56
USP39Q53GS9 MIR548AM-201ENST00000584298 74 ntBASIC-0.93□□□□□ -2.56
USP39Q53GS9 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.94□□□□□ -2.56
USP39Q53GS9 MIR4520-1-201ENST00000582609 70 ntBASIC-0.94□□□□□ -2.56
USP39Q53GS9 MIR4306-201ENST00000583390 91 ntBASIC-0.94□□□□□ -2.56
USP39Q53GS9 MIR4320-201ENST00000636981 65 ntBASIC-0.94□□□□□ -2.56
USP39Q53GS9 MIR601-201ENST00000385256 79 ntBASIC-0.95□□□□□ -2.56
USP39Q53GS9 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.95□□□□□ -2.56
USP39Q53GS9 RNU6-894P-201ENST00000517094 105 ntBASIC-0.96□□□□□ -2.56
USP39Q53GS9 RNU6-10P-201ENST00000384036 107 ntBASIC-0.97□□□□□ -2.56
USP39Q53GS9 MIR6738-201ENST00000619620 64 ntBASIC-0.97□□□□□ -2.56
USP39Q53GS9 MIR198-201ENST00000637333 62 ntBASIC-0.98□□□□□ -2.57
USP39Q53GS9 Y_RNA.406-201ENST00000383984 100 ntBASIC-1□□□□□ -2.57
USP39Q53GS9 MIR487B-201ENST00000385021 84 ntBASIC-1□□□□□ -2.57
USP39Q53GS9 RNA5SP86-201ENST00000390869 98 ntBASIC-1.01□□□□□ -2.57
USP39Q53GS9 AC097484.2-201ENST00000509147 251 ntBASIC-1.01□□□□□ -2.57
USP39Q53GS9 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.02□□□□□ -2.57
USP39Q53GS9 MIR4324-201ENST00000584846 72 ntBASIC-1.03□□□□□ -2.57
USP39Q53GS9 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.04□□□□□ -2.58
USP39Q53GS9 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.04□□□□□ -2.58
USP39Q53GS9 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.04□□□□□ -2.58
USP39Q53GS9 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.04□□□□□ -2.58
USP39Q53GS9 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.04□□□□□ -2.58
USP39Q53GS9 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.04□□□□□ -2.58
USP39Q53GS9 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.06□□□□□ -2.58
USP39Q53GS9 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.08□□□□□ -2.58
USP39Q53GS9 U4.2-201ENST00000618561 85 ntBASIC-1.09□□□□□ -2.58
USP39Q53GS9 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms