Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR3938-201ENST00000582157 103 ntBASIC-1.81□□□□□ -2.7
SMARCB1Q12824 MIR664B-201ENST00000626756 61 ntBASIC-1.81□□□□□ -2.7
SMARCB1Q12824 RNU6-800P-201ENST00000384473 103 ntBASIC-1.82□□□□□ -2.7
SMARCB1Q12824 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.82□□□□□ -2.7
SMARCB1Q12824 MIR4426-201ENST00000640330 63 ntBASIC-1.83□□□□□ -2.7
SMARCB1Q12824 RNU6-68P-201ENST00000516576 104 ntBASIC-1.84□□□□□ -2.7
SMARCB1Q12824 MIR198-201ENST00000637333 62 ntBASIC-1.84□□□□□ -2.7
SMARCB1Q12824 AC110620.1-201ENST00000416042 228 ntBASIC-1.85□□□□□ -2.71
SMARCB1Q12824 RNA5SP180-201ENST00000516181 101 ntBASIC-1.85□□□□□ -2.71
SMARCB1Q12824 RNU6-419P-201ENST00000517030 63 ntBASIC-1.85□□□□□ -2.71
SMARCB1Q12824 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.86□□□□□ -2.71
SMARCB1Q12824 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.86□□□□□ -2.71
SMARCB1Q12824 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.86□□□□□ -2.71
SMARCB1Q12824 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.86□□□□□ -2.71
SMARCB1Q12824 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.87□□□□□ -2.71
SMARCB1Q12824 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.87□□□□□ -2.71
SMARCB1Q12824 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.88□□□□□ -2.71
SMARCB1Q12824 RNU6-742P-201ENST00000365289 107 ntBASIC-1.88□□□□□ -2.71
SMARCB1Q12824 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.88□□□□□ -2.71
SMARCB1Q12824 SNORD45.2-201ENST00000363552 72 ntBASIC-1.89□□□□□ -2.71
SMARCB1Q12824 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.89□□□□□ -2.71
SMARCB1Q12824 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.89□□□□□ -2.71
SMARCB1Q12824 RNU6-776P-201ENST00000364403 104 ntBASIC-1.9□□□□□ -2.71
SMARCB1Q12824 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.9□□□□□ -2.71
SMARCB1Q12824 MIR601-201ENST00000385256 79 ntBASIC-1.9□□□□□ -2.71
SMARCB1Q12824 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.9□□□□□ -2.71
SMARCB1Q12824 RNU6-912P-201ENST00000363800 104 ntBASIC-1.91□□□□□ -2.72
SMARCB1Q12824 RNU6-590P-201ENST00000365039 107 ntBASIC-1.91□□□□□ -2.72
SMARCB1Q12824 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.91□□□□□ -2.72
SMARCB1Q12824 MIR1285-2-201ENST00000408311 88 ntBASIC-1.91□□□□□ -2.72
SMARCB1Q12824 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.92□□□□□ -2.72
SMARCB1Q12824 RNU6-300P-201ENST00000459080 104 ntBASIC-1.92□□□□□ -2.72
SMARCB1Q12824 AC097484.2-201ENST00000509147 251 ntBASIC-1.92□□□□□ -2.72
SMARCB1Q12824 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.93□□□□□ -2.72
SMARCB1Q12824 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.93□□□□□ -2.72
SMARCB1Q12824 MIR4679-1-201ENST00000637619 75 ntBASIC-1.93□□□□□ -2.72
SMARCB1Q12824 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.94□□□□□ -2.72
SMARCB1Q12824 SNORD113-3-201ENST00000364830 72 ntBASIC-1.94□□□□□ -2.72
SMARCB1Q12824 RNU6-446P-201ENST00000362827 106 ntBASIC-1.95□□□□□ -2.72
SMARCB1Q12824 MIR4662A-201ENST00000637499 67 ntBASIC-1.95□□□□□ -2.72
SMARCB1Q12824 RNA5SP405-201ENST00000363059 114 ntBASIC-1.96□□□□□ -2.72
SMARCB1Q12824 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.96□□□□□ -2.72
SMARCB1Q12824 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.96□□□□□ -2.72
SMARCB1Q12824 MIR1302-4-201ENST00000408701 150 ntBASIC-1.96□□□□□ -2.72
SMARCB1Q12824 RNU6-118P-201ENST00000516552 102 ntBASIC-1.96□□□□□ -2.72
SMARCB1Q12824 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.96□□□□□ -2.72
SMARCB1Q12824 MIR379-201ENST00000362218 67 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.97□□□□□ -2.72
SMARCB1Q12824 MIR365A-201ENST00000362260 87 ntBASIC-1.98□□□□□ -2.73
SMARCB1Q12824 RNU6-471P-201ENST00000383944 106 ntBASIC-1.98□□□□□ -2.73
SMARCB1Q12824 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.99□□□□□ -2.73
SMARCB1Q12824 RNU6-194P-201ENST00000363862 105 ntBASIC-1.99□□□□□ -2.73
SMARCB1Q12824 MIR548X-201ENST00000580069 75 ntBASIC-1.99□□□□□ -2.73
SMARCB1Q12824 FTX_4.1-201ENST00000616291 147 ntBASIC-1.99□□□□□ -2.73
SMARCB1Q12824 RNU6-1312P-201ENST00000362425 108 ntBASIC-2□□□□□ -2.73
SMARCB1Q12824 Y_RNA.129-201ENST00000363392 110 ntBASIC-2□□□□□ -2.73
SMARCB1Q12824 RNU6-176P-201ENST00000517196 105 ntBASIC-2□□□□□ -2.73
SMARCB1Q12824 MIR4748-201ENST00000578076 82 ntBASIC-2□□□□□ -2.73
SMARCB1Q12824 MIR4441-201ENST00000582623 100 ntBASIC-2.01□□□□□ -2.73
SMARCB1Q12824 AC114801.3-201ENST00000510231 177 ntBASIC-2.02□□□□□ -2.73
SMARCB1Q12824 SNORD113-4-201ENST00000364802 75 ntBASIC-2.04□□□□□ -2.74
SMARCB1Q12824 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.04□□□□□ -2.74
SMARCB1Q12824 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.05□□□□□ -2.74
SMARCB1Q12824 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
SMARCB1Q12824 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.05□□□□□ -2.74
SMARCB1Q12824 MIR1254-1-201ENST00000408257 97 ntBASIC-2.06□□□□□ -2.74
SMARCB1Q12824 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.06□□□□□ -2.74
SMARCB1Q12824 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.07□□□□□ -2.74
SMARCB1Q12824 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.07□□□□□ -2.74
SMARCB1Q12824 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.08□□□□□ -2.74
SMARCB1Q12824 RNU6-141P-201ENST00000410499 105 ntBASIC-2.09□□□□□ -2.74
SMARCB1Q12824 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.1□□□□□ -2.75
SMARCB1Q12824 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.11□□□□□ -2.75
SMARCB1Q12824 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.11□□□□□ -2.75
SMARCB1Q12824 MIR3139-201ENST00000579145 76 ntBASIC-2.11□□□□□ -2.75
SMARCB1Q12824 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.11□□□□□ -2.75
SMARCB1Q12824 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.11□□□□□ -2.75
SMARCB1Q12824 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.12□□□□□ -2.75
SMARCB1Q12824 MIR4723-201ENST00000585070 81 ntBASIC-2.12□□□□□ -2.75
SMARCB1Q12824 RNU6-829P-201ENST00000363700 112 ntBASIC-2.13□□□□□ -2.75
SMARCB1Q12824 MIR633-201ENST00000384821 98 ntBASIC-2.13□□□□□ -2.75
SMARCB1Q12824 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.13□□□□□ -2.75
SMARCB1Q12824 U4.2-201ENST00000618561 85 ntBASIC-2.13□□□□□ -2.75
SMARCB1Q12824 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.17□□□□□ -2.76
SMARCB1Q12824 RNY4P9-201ENST00000363194 97 ntBASIC-2.18□□□□□ -2.76
SMARCB1Q12824 RNU4-33P-201ENST00000364316 85 ntBASIC-2.18□□□□□ -2.76
SMARCB1Q12824 SNORD114-3-201ENST00000364969 75 ntBASIC-2.18□□□□□ -2.76
SMARCB1Q12824 MIR548H4-201ENST00000408689 111 ntBASIC-2.18□□□□□ -2.76
SMARCB1Q12824 RNU6-345P-201ENST00000517001 107 ntBASIC-2.18□□□□□ -2.76
SMARCB1Q12824 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.18□□□□□ -2.76
SMARCB1Q12824 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.2□□□□□ -2.76
SMARCB1Q12824 MT-TM-201ENST00000387377 68 ntBASIC-2.2□□□□□ -2.76
SMARCB1Q12824 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.21□□□□□ -2.76
SMARCB1Q12824 MIR4317-201ENST00000637586 65 ntBASIC-2.22□□□□□ -2.76
SMARCB1Q12824 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.23□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms