Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-753P-201ENST00000363926 107 ntBASIC-0.66□□□□□ -2.52
MRE11P49959 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.68□□□□□ -2.52
MRE11P49959 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.68□□□□□ -2.52
MRE11P49959 MIR29B1-201ENST00000385015 81 ntBASIC-0.69□□□□□ -2.52
MRE11P49959 RNU6-530P-201ENST00000391180 107 ntBASIC-0.69□□□□□ -2.52
MRE11P49959 AC090616.4-201ENST00000448026 115 ntBASIC-0.69□□□□□ -2.52
MRE11P49959 MIR4306-201ENST00000583390 91 ntBASIC-0.69□□□□□ -2.52
MRE11P49959 MIR382-201ENST00000637119 76 ntBASIC-0.69□□□□□ -2.52
MRE11P49959 MIR496-201ENST00000385226 102 ntBASIC-0.7□□□□□ -2.52
MRE11P49959 RNU7-134P-201ENST00000458997 64 ntBASIC-0.7□□□□□ -2.52
MRE11P49959 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.73□□□□□ -2.53
MRE11P49959 MIR23C-201ENST00000579846 100 ntBASIC-0.73□□□□□ -2.53
MRE11P49959 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.74□□□□□ -2.53
MRE11P49959 snoU83B.1-201ENST00000517136 88 ntBASIC-0.74□□□□□ -2.53
MRE11P49959 RNU6-706P-201ENST00000517229 104 ntBASIC-0.74□□□□□ -2.53
MRE11P49959 MIR6818-201ENST00000621576 65 ntBASIC-0.74□□□□□ -2.53
MRE11P49959 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.75□□□□□ -2.53
MRE11P49959 RNU4-88P-201ENST00000411220 86 ntBASIC-0.75□□□□□ -2.53
MRE11P49959 RNY3P8-201ENST00000411366 126 ntBASIC-0.75□□□□□ -2.53
MRE11P49959 HLA-S-202ENST00000425174 53 ntBASIC-0.75□□□□□ -2.53
MRE11P49959 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.76□□□□□ -2.53
MRE11P49959 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.77□□□□□ -2.53
MRE11P49959 RNA5SP93-201ENST00000362525 114 ntBASIC-0.78□□□□□ -2.53
MRE11P49959 RNU6-838P-201ENST00000363399 108 ntBASIC-0.78□□□□□ -2.53
MRE11P49959 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.78□□□□□ -2.53
MRE11P49959 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.79□□□□□ -2.54
MRE11P49959 RNU6-361P-201ENST00000364454 107 ntBASIC-0.79□□□□□ -2.54
MRE11P49959 RNU6-742P-201ENST00000365289 107 ntBASIC-0.8□□□□□ -2.54
MRE11P49959 RNU6-930P-201ENST00000390938 100 ntBASIC-0.8□□□□□ -2.54
MRE11P49959 MIR8485-201ENST00000401372 91 ntBASIC-0.8□□□□□ -2.54
MRE11P49959 MIR202-201ENST00000362219 110 ntBASIC-0.81□□□□□ -2.54
MRE11P49959 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.81□□□□□ -2.54
MRE11P49959 MIR548AL-201ENST00000578416 97 ntBASIC-0.81□□□□□ -2.54
MRE11P49959 RNU6-119P-201ENST00000364882 107 ntBASIC-0.82□□□□□ -2.54
MRE11P49959 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.82□□□□□ -2.54
MRE11P49959 RNU6-118P-201ENST00000516552 102 ntBASIC-0.82□□□□□ -2.54
MRE11P49959 MIR5591-201ENST00000578248 65 ntBASIC-0.82□□□□□ -2.54
MRE11P49959 MIR4426-201ENST00000640330 63 ntBASIC-0.82□□□□□ -2.54
MRE11P49959 RNU6-983P-201ENST00000516004 103 ntBASIC-0.83□□□□□ -2.54
MRE11P49959 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.83□□□□□ -2.54
MRE11P49959 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.84□□□□□ -2.54
MRE11P49959 AC120024.2-201ENST00000576526 175 ntBASIC-0.84□□□□□ -2.54
MRE11P49959 SNORA17.4-201ENST00000391287 132 ntBASIC-0.85□□□□□ -2.55
MRE11P49959 RNU6-164P-201ENST00000364604 103 ntBASIC-0.86□□□□□ -2.55
MRE11P49959 MIR548F3-201ENST00000408509 87 ntBASIC-0.86□□□□□ -2.55
MRE11P49959 AC018880.2-201ENST00000414265 201 ntBASIC-0.86□□□□□ -2.55
MRE11P49959 RNU6-563P-201ENST00000364872 108 ntBASIC-0.87□□□□□ -2.55
MRE11P49959 AC013734.1-201ENST00000619329 111 ntBASIC-0.87□□□□□ -2.55
MRE11P49959 SNORD60-201ENST00000383903 83 ntBASIC-0.88□□□□□ -2.55
MRE11P49959 AC138207.3-201ENST00000585289 166 ntBASIC-0.88□□□□□ -2.55
MRE11P49959 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.88□□□□□ -2.55
MRE11P49959 AC091912.2-201ENST00000624798 167 ntBASIC-0.88□□□□□ -2.55
MRE11P49959 RNY4-201ENST00000516507 96 ntBASIC-0.9□□□□□ -2.55
MRE11P49959 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.91□□□□□ -2.56
MRE11P49959 RNU6-576P-201ENST00000390854 102 ntBASIC-0.92□□□□□ -2.56
MRE11P49959 MIR548N-201ENST00000408742 75 ntBASIC-0.92□□□□□ -2.56
MRE11P49959 RNU6-300P-201ENST00000459080 104 ntBASIC-0.92□□□□□ -2.56
MRE11P49959 MIR4520-1-201ENST00000582609 70 ntBASIC-0.93□□□□□ -2.56
MRE11P49959 RNU6-79P-201ENST00000362511 107 ntBASIC-0.94□□□□□ -2.56
MRE11P49959 SNORD18.1-201ENST00000363807 70 ntBASIC-0.94□□□□□ -2.56
MRE11P49959 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.94□□□□□ -2.56
MRE11P49959 SNORD54-201ENST00000459159 67 ntBASIC-0.94□□□□□ -2.56
MRE11P49959 MIR4770-201ENST00000579149 58 ntBASIC-0.95□□□□□ -2.56
MRE11P49959 MIR6874-201ENST00000635894 71 ntBASIC-0.95□□□□□ -2.56
MRE11P49959 RNU6-176P-201ENST00000517196 105 ntBASIC-0.96□□□□□ -2.56
MRE11P49959 U6.97-201ENST00000636904 101 ntBASIC-0.96□□□□□ -2.56
MRE11P49959 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.97□□□□□ -2.56
MRE11P49959 MIR548H4-201ENST00000408689 111 ntBASIC-0.98□□□□□ -2.57
MRE11P49959 MIR581-201ENST00000384895 96 ntBASIC-1□□□□□ -2.57
MRE11P49959 MIR545-201ENST00000385085 106 ntBASIC-1□□□□□ -2.57
MRE11P49959 RNA5SP86-201ENST00000390869 98 ntBASIC-1□□□□□ -2.57
MRE11P49959 MIR3139-201ENST00000579145 76 ntBASIC-1□□□□□ -2.57
MRE11P49959 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.01□□□□□ -2.57
MRE11P49959 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.01□□□□□ -2.57
MRE11P49959 RNU6-986P-201ENST00000363133 102 ntBASIC-1.02□□□□□ -2.57
MRE11P49959 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.02□□□□□ -2.57
MRE11P49959 MIR4317-201ENST00000637586 65 ntBASIC-1.02□□□□□ -2.57
MRE11P49959 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.03□□□□□ -2.57
MRE11P49959 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.03□□□□□ -2.57
MRE11P49959 MIR487B-201ENST00000385021 84 ntBASIC-1.04□□□□□ -2.58
MRE11P49959 MT-TM-201ENST00000387377 68 ntBASIC-1.04□□□□□ -2.58
MRE11P49959 MIR4756-201ENST00000577874 78 ntBASIC-1.04□□□□□ -2.58
MRE11P49959 MIR6502-201ENST00000617296 76 ntBASIC-1.04□□□□□ -2.58
MRE11P49959 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.04□□□□□ -2.58
MRE11P49959 SNORD18C-201ENST00000362704 69 ntBASIC-1.05□□□□□ -2.58
MRE11P49959 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.05□□□□□ -2.58
MRE11P49959 RNU6-400P-201ENST00000391173 106 ntBASIC-1.07□□□□□ -2.58
MRE11P49959 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.08□□□□□ -2.58
MRE11P49959 MIR548H1-201ENST00000408610 102 ntBASIC-1.09□□□□□ -2.58
MRE11P49959 AC108019.1-201ENST00000512540 175 ntBASIC-1.09□□□□□ -2.58
MRE11P49959 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.09□□□□□ -2.58
MRE11P49959 RNU6-822P-201ENST00000362707 106 ntBASIC-1.11□□□□□ -2.59
MRE11P49959 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.11□□□□□ -2.59
MRE11P49959 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.12□□□□□ -2.59
MRE11P49959 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.12□□□□□ -2.59
MRE11P49959 MIR664B-201ENST00000626756 61 ntBASIC-1.12□□□□□ -2.59
MRE11P49959 RNU6-695P-201ENST00000391157 104 ntBASIC-1.13□□□□□ -2.59
MRE11P49959 RNU6-68P-201ENST00000516576 104 ntBASIC-1.13□□□□□ -2.59
MRE11P49959 MIR379-201ENST00000362218 67 ntBASIC-1.15□□□□□ -2.59
MRE11P49959 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms