Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU6-940P-201ENST00000363433 104 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 RNU6-742P-201ENST00000365289 107 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 AC097484.2-201ENST00000509147 251 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 MIR4748-201ENST00000578076 82 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 MIR4426-201ENST00000640330 63 ntBASIC-1.25□□□□□ -2.61
LHX1P48742 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 AC110620.1-201ENST00000416042 228 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 RNA5SP170-201ENST00000517150 101 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 MIR466-201ENST00000580653 84 ntBASIC-1.26□□□□□ -2.61
LHX1P48742 SNORD113-3-201ENST00000364830 72 ntBASIC-1.27□□□□□ -2.61
LHX1P48742 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.27□□□□□ -2.61
LHX1P48742 RNU6-800P-201ENST00000384473 103 ntBASIC-1.27□□□□□ -2.61
LHX1P48742 RNU6-871P-201ENST00000516122 100 ntBASIC-1.27□□□□□ -2.61
LHX1P48742 RNU6-912P-201ENST00000363800 104 ntBASIC-1.28□□□□□ -2.61
LHX1P48742 RNU6-590P-201ENST00000365039 107 ntBASIC-1.28□□□□□ -2.61
LHX1P48742 RNA5SP225-201ENST00000410874 135 ntBASIC-1.28□□□□□ -2.61
LHX1P48742 RNU6-118P-201ENST00000516552 102 ntBASIC-1.28□□□□□ -2.61
LHX1P48742 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 FTX_4.1-201ENST00000616291 147 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.29□□□□□ -2.62
LHX1P48742 MIR379-201ENST00000362218 67 ntBASIC-1.3□□□□□ -2.62
LHX1P48742 SNORD45.2-201ENST00000363552 72 ntBASIC-1.3□□□□□ -2.62
LHX1P48742 SNORD78.1-201ENST00000390866 65 ntBASIC-1.3□□□□□ -2.62
LHX1P48742 SNORA26.2-201ENST00000390922 122 ntBASIC-1.3□□□□□ -2.62
LHX1P48742 MIR1285-2-201ENST00000408311 88 ntBASIC-1.3□□□□□ -2.62
LHX1P48742 RNU6-300P-201ENST00000459080 104 ntBASIC-1.3□□□□□ -2.62
LHX1P48742 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.31□□□□□ -2.62
LHX1P48742 RNU6-446P-201ENST00000362827 106 ntBASIC-1.31□□□□□ -2.62
LHX1P48742 RNU6-194P-201ENST00000363862 105 ntBASIC-1.31□□□□□ -2.62
LHX1P48742 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.31□□□□□ -2.62
LHX1P48742 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.31□□□□□ -2.62
LHX1P48742 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
LHX1P48742 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.32□□□□□ -2.62
LHX1P48742 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.33□□□□□ -2.62
LHX1P48742 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.34□□□□□ -2.62
LHX1P48742 RNU6-176P-201ENST00000517196 105 ntBASIC-1.34□□□□□ -2.62
LHX1P48742 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.34□□□□□ -2.62
LHX1P48742 MIR3139-201ENST00000579145 76 ntBASIC-1.34□□□□□ -2.62
LHX1P48742 MIR548X-201ENST00000580069 75 ntBASIC-1.34□□□□□ -2.62
LHX1P48742 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.35□□□□□ -2.63
LHX1P48742 RNU6-776P-201ENST00000364403 104 ntBASIC-1.35□□□□□ -2.63
LHX1P48742 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.35□□□□□ -2.63
LHX1P48742 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.35□□□□□ -2.63
LHX1P48742 RNU6-141P-201ENST00000410499 105 ntBASIC-1.35□□□□□ -2.63
LHX1P48742 RNU6-471P-201ENST00000383944 106 ntBASIC-1.36□□□□□ -2.63
LHX1P48742 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.36□□□□□ -2.63
LHX1P48742 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.38□□□□□ -2.63
LHX1P48742 SNORD113-4-201ENST00000364802 75 ntBASIC-1.38□□□□□ -2.63
LHX1P48742 MIR4441-201ENST00000582623 100 ntBASIC-1.38□□□□□ -2.63
LHX1P48742 MIR4679-1-201ENST00000637619 75 ntBASIC-1.38□□□□□ -2.63
LHX1P48742 MIR409-201ENST00000362237 79 ntBASIC-1.39□□□□□ -2.63
LHX1P48742 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.39□□□□□ -2.63
LHX1P48742 MIR1254-1-201ENST00000408257 97 ntBASIC-1.39□□□□□ -2.63
LHX1P48742 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.4□□□□□ -2.63
LHX1P48742 MIR1302-4-201ENST00000408701 150 ntBASIC-1.4□□□□□ -2.63
LHX1P48742 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.4□□□□□ -2.63
LHX1P48742 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.4□□□□□ -2.63
LHX1P48742 MIR4662A-201ENST00000637499 67 ntBASIC-1.4□□□□□ -2.63
LHX1P48742 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.41□□□□□ -2.64
LHX1P48742 MIR548H4-201ENST00000408689 111 ntBASIC-1.41□□□□□ -2.64
LHX1P48742 MT-TM-201ENST00000387377 68 ntBASIC-1.42□□□□□ -2.64
LHX1P48742 AC114801.3-201ENST00000510231 177 ntBASIC-1.42□□□□□ -2.64
LHX1P48742 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.42□□□□□ -2.64
LHX1P48742 MIR365A-201ENST00000362260 87 ntBASIC-1.43□□□□□ -2.64
LHX1P48742 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.43□□□□□ -2.64
LHX1P48742 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.43□□□□□ -2.64
LHX1P48742 RNY4P9-201ENST00000363194 97 ntBASIC-1.44□□□□□ -2.64
LHX1P48742 RNU6-345P-201ENST00000517001 107 ntBASIC-1.44□□□□□ -2.64
LHX1P48742 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.45□□□□□ -2.64
LHX1P48742 RNU6-829P-201ENST00000363700 112 ntBASIC-1.45□□□□□ -2.64
LHX1P48742 RNA5SP266-201ENST00000410273 108 ntBASIC-1.45□□□□□ -2.64
LHX1P48742 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.46□□□□□ -2.64
LHX1P48742 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.46□□□□□ -2.64
LHX1P48742 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.47□□□□□ -2.64
LHX1P48742 RNU4-33P-201ENST00000364316 85 ntBASIC-1.48□□□□□ -2.65
LHX1P48742 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.48□□□□□ -2.65
LHX1P48742 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.48□□□□□ -2.65
LHX1P48742 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.49□□□□□ -2.65
LHX1P48742 MIR633-201ENST00000384821 98 ntBASIC-1.49□□□□□ -2.65
LHX1P48742 AC139453.2-201ENST00000487255 133 ntBASIC-1.5□□□□□ -2.65
LHX1P48742 MIR548AL-201ENST00000578416 97 ntBASIC-1.5□□□□□ -2.65
LHX1P48742 AL731768.1-201ENST00000603124 139 ntBASIC-1.5□□□□□ -2.65
LHX1P48742 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.51□□□□□ -2.65
LHX1P48742 RNA5SP224-201ENST00000365069 126 ntBASIC-1.51□□□□□ -2.65
LHX1P48742 SNX3P1X-201ENST00000414887 175 ntBASIC-1.51□□□□□ -2.65
LHX1P48742 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.52□□□□□ -2.65
LHX1P48742 RNU6-822P-201ENST00000362707 106 ntBASIC-1.53□□□□□ -2.65
LHX1P48742 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.53□□□□□ -2.65
LHX1P48742 MIR601-201ENST00000385256 79 ntBASIC-1.53□□□□□ -2.65
LHX1P48742 MIR4317-201ENST00000637586 65 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms