Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-530P-201ENST00000391180 107 ntBASIC-1.64□□□□□ -2.67
TNFSF9P41273 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.65□□□□□ -2.67
TNFSF9P41273 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.65□□□□□ -2.67
TNFSF9P41273 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.65□□□□□ -2.67
TNFSF9P41273 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.65□□□□□ -2.67
TNFSF9P41273 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.65□□□□□ -2.67
TNFSF9P41273 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.66□□□□□ -2.68
TNFSF9P41273 SNORD78.1-201ENST00000390866 65 ntBASIC-1.66□□□□□ -2.68
TNFSF9P41273 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.66□□□□□ -2.68
TNFSF9P41273 MIR4441-201ENST00000582623 100 ntBASIC-1.66□□□□□ -2.68
TNFSF9P41273 MIR548N-201ENST00000408742 75 ntBASIC-1.67□□□□□ -2.68
TNFSF9P41273 MIR3139-201ENST00000579145 76 ntBASIC-1.67□□□□□ -2.68
TNFSF9P41273 MIR466-201ENST00000580653 84 ntBASIC-1.67□□□□□ -2.68
TNFSF9P41273 MIR365A-201ENST00000362260 87 ntBASIC-1.68□□□□□ -2.68
TNFSF9P41273 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.69□□□□□ -2.68
TNFSF9P41273 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.69□□□□□ -2.68
TNFSF9P41273 RNU6-800P-201ENST00000384473 103 ntBASIC-1.69□□□□□ -2.68
TNFSF9P41273 SNORA17.4-201ENST00000391287 132 ntBASIC-1.69□□□□□ -2.68
TNFSF9P41273 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.69□□□□□ -2.68
TNFSF9P41273 SNORD18C-201ENST00000362704 69 ntBASIC-1.7□□□□□ -2.68
TNFSF9P41273 RNU6-361P-201ENST00000364454 107 ntBASIC-1.7□□□□□ -2.68
TNFSF9P41273 RNU6-68P-201ENST00000516576 104 ntBASIC-1.7□□□□□ -2.68
TNFSF9P41273 MIR3938-201ENST00000582157 103 ntBASIC-1.7□□□□□ -2.68
TNFSF9P41273 U4.2-201ENST00000618561 85 ntBASIC-1.7□□□□□ -2.68
TNFSF9P41273 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.71□□□□□ -2.68
TNFSF9P41273 RNU6-871P-201ENST00000516122 100 ntBASIC-1.71□□□□□ -2.68
TNFSF9P41273 RNU6-539P-201ENST00000516665 103 ntBASIC-1.71□□□□□ -2.68
TNFSF9P41273 MIR4679-1-201ENST00000637619 75 ntBASIC-1.71□□□□□ -2.68
TNFSF9P41273 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.71□□□□□ -2.68
TNFSF9P41273 RNU6-742P-201ENST00000365289 107 ntBASIC-1.72□□□□□ -2.68
TNFSF9P41273 SNORD60-201ENST00000383903 83 ntBASIC-1.72□□□□□ -2.68
TNFSF9P41273 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
TNFSF9P41273 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.72□□□□□ -2.68
TNFSF9P41273 AL451105.1-201ENST00000450005 189 ntBASIC-1.72□□□□□ -2.68
TNFSF9P41273 AC103706.3-201ENST00000636297 85 ntBASIC-1.72□□□□□ -2.68
TNFSF9P41273 RNU6-940P-201ENST00000363433 104 ntBASIC-1.73□□□□□ -2.69
TNFSF9P41273 RNU6-194P-201ENST00000363862 105 ntBASIC-1.73□□□□□ -2.69
TNFSF9P41273 AC110620.1-201ENST00000416042 228 ntBASIC-1.73□□□□□ -2.69
TNFSF9P41273 RNU7-119P-201ENST00000459279 63 ntBASIC-1.73□□□□□ -2.69
TNFSF9P41273 MIR4426-201ENST00000640330 63 ntBASIC-1.73□□□□□ -2.69
TNFSF9P41273 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.74□□□□□ -2.69
TNFSF9P41273 MT-TM-201ENST00000387377 68 ntBASIC-1.74□□□□□ -2.69
TNFSF9P41273 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.75□□□□□ -2.69
TNFSF9P41273 RNU6-776P-201ENST00000364403 104 ntBASIC-1.75□□□□□ -2.69
TNFSF9P41273 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.75□□□□□ -2.69
TNFSF9P41273 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.75□□□□□ -2.69
TNFSF9P41273 RNU6-912P-201ENST00000363800 104 ntBASIC-1.76□□□□□ -2.69
TNFSF9P41273 RNU6-419P-201ENST00000517030 63 ntBASIC-1.76□□□□□ -2.69
TNFSF9P41273 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.77□□□□□ -2.69
TNFSF9P41273 RNU6-446P-201ENST00000362827 106 ntBASIC-1.78□□□□□ -2.69
TNFSF9P41273 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.78□□□□□ -2.69
TNFSF9P41273 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.78□□□□□ -2.69
TNFSF9P41273 SNORD113-3-201ENST00000364830 72 ntBASIC-1.79□□□□□ -2.7
TNFSF9P41273 SNORD114-3-201ENST00000364969 75 ntBASIC-1.79□□□□□ -2.7
TNFSF9P41273 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.79□□□□□ -2.7
TNFSF9P41273 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.81□□□□□ -2.7
TNFSF9P41273 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.81□□□□□ -2.7
TNFSF9P41273 MIR496-201ENST00000385226 102 ntBASIC-1.81□□□□□ -2.7
TNFSF9P41273 MIR1207-201ENST00000408249 87 ntBASIC-1.81□□□□□ -2.7
TNFSF9P41273 MIR4748-201ENST00000578076 82 ntBASIC-1.81□□□□□ -2.7
TNFSF9P41273 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.82□□□□□ -2.7
TNFSF9P41273 RNU6-590P-201ENST00000365039 107 ntBASIC-1.82□□□□□ -2.7
TNFSF9P41273 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.82□□□□□ -2.7
TNFSF9P41273 RNU6-300P-201ENST00000459080 104 ntBASIC-1.82□□□□□ -2.7
TNFSF9P41273 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.82□□□□□ -2.7
TNFSF9P41273 RNU6-141P-201ENST00000410499 105 ntBASIC-1.83□□□□□ -2.7
TNFSF9P41273 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.83□□□□□ -2.7
TNFSF9P41273 SNORD113-4-201ENST00000364802 75 ntBASIC-1.85□□□□□ -2.71
TNFSF9P41273 AC097484.2-201ENST00000509147 251 ntBASIC-1.85□□□□□ -2.71
TNFSF9P41273 MIR4662A-201ENST00000637499 67 ntBASIC-1.85□□□□□ -2.71
TNFSF9P41273 RNY4P27-201ENST00000363341 96 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 SNORD45.2-201ENST00000363552 72 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.86□□□□□ -2.71
TNFSF9P41273 MIR1302-4-201ENST00000408701 150 ntBASIC-1.87□□□□□ -2.71
TNFSF9P41273 FTX_4.1-201ENST00000616291 147 ntBASIC-1.87□□□□□ -2.71
TNFSF9P41273 MIR548X-201ENST00000580069 75 ntBASIC-1.88□□□□□ -2.71
TNFSF9P41273 RNU6-471P-201ENST00000383944 106 ntBASIC-1.89□□□□□ -2.71
TNFSF9P41273 AC114801.3-201ENST00000510231 177 ntBASIC-1.89□□□□□ -2.71
TNFSF9P41273 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.9□□□□□ -2.71
TNFSF9P41273 MIR1254-1-201ENST00000408257 97 ntBASIC-1.9□□□□□ -2.71
TNFSF9P41273 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.91□□□□□ -2.72
TNFSF9P41273 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.91□□□□□ -2.72
TNFSF9P41273 MIR379-201ENST00000362218 67 ntBASIC-1.93□□□□□ -2.72
TNFSF9P41273 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.93□□□□□ -2.72
TNFSF9P41273 MIR633-201ENST00000384821 98 ntBASIC-1.93□□□□□ -2.72
TNFSF9P41273 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.93□□□□□ -2.72
TNFSF9P41273 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.95□□□□□ -2.72
TNFSF9P41273 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.96□□□□□ -2.72
TNFSF9P41273 RNU6-829P-201ENST00000363700 112 ntBASIC-1.97□□□□□ -2.72
TNFSF9P41273 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.98□□□□□ -2.73
TNFSF9P41273 RNU6-176P-201ENST00000517196 105 ntBASIC-1.98□□□□□ -2.73
TNFSF9P41273 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.99□□□□□ -2.73
TNFSF9P41273 Y_RNA.722-201ENST00000517279 114 ntBASIC-2□□□□□ -2.73
TNFSF9P41273 RNA5SP93-201ENST00000362525 114 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms