Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.84□□□□□ -3.02
SDC4P31431 SNORA63-201ENST00000363450 132 ntBASIC-3.85□□□□□ -3.03
SDC4P31431 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.85□□□□□ -3.03
SDC4P31431 SNORA40.13-201ENST00000516379 120 ntBASIC-3.85□□□□□ -3.03
SDC4P31431 RNU6-589P-201ENST00000516485 107 ntBASIC-3.85□□□□□ -3.03
SDC4P31431 RNU6-844P-201ENST00000517175 102 ntBASIC-3.85□□□□□ -3.03
SDC4P31431 RNU6-822P-201ENST00000362707 106 ntBASIC-3.86□□□□□ -3.03
SDC4P31431 RNU6-255P-201ENST00000516957 105 ntBASIC-3.86□□□□□ -3.03
SDC4P31431 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.87□□□□□ -3.03
SDC4P31431 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.87□□□□□ -3.03
SDC4P31431 MIR4712-201ENST00000583750 82 ntBASIC-3.87□□□□□ -3.03
SDC4P31431 RNY1P5-201ENST00000383890 115 ntBASIC-3.88□□□□□ -3.03
SDC4P31431 AL031737.1-201ENST00000450125 223 ntBASIC-3.88□□□□□ -3.03
SDC4P31431 RNY4-201ENST00000516507 96 ntBASIC-3.89□□□□□ -3.03
SDC4P31431 SNORD114-13-201ENST00000364377 74 ntBASIC-3.9□□□□□ -3.03
SDC4P31431 AC139453.2-201ENST00000487255 133 ntBASIC-3.9□□□□□ -3.03
SDC4P31431 AC062037.1-201ENST00000605302 128 ntBASIC-3.91□□□□□ -3.04
SDC4P31431 AL117351.2-201ENST00000513571 157 ntBASIC-3.92□□□□□ -3.04
SDC4P31431 MIR5588-201ENST00000581890 63 ntBASIC-3.92□□□□□ -3.04
SDC4P31431 MIR509-1-201ENST00000385265 94 ntBASIC-3.93□□□□□ -3.04
SDC4P31431 MIR509-2-201ENST00000390724 91 ntBASIC-3.93□□□□□ -3.04
SDC4P31431 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.93□□□□□ -3.04
SDC4P31431 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.93□□□□□ -3.04
SDC4P31431 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.93□□□□□ -3.04
SDC4P31431 RNU6-327P-201ENST00000516270 127 ntBASIC-3.94□□□□□ -3.04
SDC4P31431 MIR1245B-201ENST00000636115 69 ntBASIC-3.94□□□□□ -3.04
SDC4P31431 RNU6-854P-201ENST00000364036 107 ntBASIC-3.96□□□□□ -3.04
SDC4P31431 RNU6-979P-201ENST00000383896 107 ntBASIC-3.96□□□□□ -3.04
SDC4P31431 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.96□□□□□ -3.04
SDC4P31431 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.97□□□□□ -3.04
SDC4P31431 RNU6-411P-201ENST00000384451 107 ntBASIC-3.97□□□□□ -3.04
SDC4P31431 RNU6-663P-201ENST00000391105 106 ntBASIC-3.98□□□□□ -3.05
SDC4P31431 IGLL4P-201ENST00000614590 133 ntBASIC-3.98□□□□□ -3.05
SDC4P31431 RNU6-640P-201ENST00000363693 105 ntBASIC-3.99□□□□□ -3.05
SDC4P31431 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.99□□□□□ -3.05
SDC4P31431 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.99□□□□□ -3.05
SDC4P31431 MIR656-201ENST00000385224 78 ntBASIC-4□□□□□ -3.05
SDC4P31431 SNORD115-45-201ENST00000391078 81 ntBASIC-4□□□□□ -3.05
SDC4P31431 Y_RNA.709-201ENST00000516952 92 ntBASIC-4□□□□□ -3.05
SDC4P31431 RNA5SP224-201ENST00000365069 126 ntBASIC-4.01□□□□□ -3.05
SDC4P31431 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.03□□□□□ -3.05
SDC4P31431 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.03□□□□□ -3.05
SDC4P31431 SNORD45C-201ENST00000383893 79 ntBASIC-4.04□□□□□ -3.06
SDC4P31431 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.04□□□□□ -3.06
SDC4P31431 RNU7-171P-201ENST00000459581 62 ntBASIC-4.04□□□□□ -3.06
SDC4P31431 MIR3938-201ENST00000582157 103 ntBASIC-4.04□□□□□ -3.06
SDC4P31431 AL365222.1-201ENST00000614661 98 ntBASIC-4.04□□□□□ -3.06
SDC4P31431 SNORA25.4-201ENST00000363666 124 ntBASIC-4.05□□□□□ -3.06
SDC4P31431 RNU6-463P-201ENST00000384340 107 ntBASIC-4.05□□□□□ -3.06
SDC4P31431 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.05□□□□□ -3.06
SDC4P31431 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.06□□□□□ -3.06
SDC4P31431 SNORD115.2-201ENST00000391126 59 ntBASIC-4.06□□□□□ -3.06
SDC4P31431 RNU6-634P-201ENST00000459134 106 ntBASIC-4.06□□□□□ -3.06
SDC4P31431 RNU6-940P-201ENST00000363433 104 ntBASIC-4.07□□□□□ -3.06
SDC4P31431 MIR124-1-201ENST00000385275 85 ntBASIC-4.07□□□□□ -3.06
SDC4P31431 AC008267.6-201ENST00000441664 139 ntBASIC-4.07□□□□□ -3.06
SDC4P31431 RNA5SP106-201ENST00000517274 100 ntBASIC-4.07□□□□□ -3.06
SDC4P31431 RNY4P10-201ENST00000365571 96 ntBASIC-4.09□□□□□ -3.06
SDC4P31431 RNU6-959P-201ENST00000384671 107 ntBASIC-4.09□□□□□ -3.06
SDC4P31431 MIR4317-201ENST00000637586 65 ntBASIC-4.09□□□□□ -3.06
SDC4P31431 RNU6-1045P-201ENST00000516321 107 ntBASIC-4.1□□□□□ -3.07
SDC4P31431 MT-TG-201ENST00000387429 68 ntBASIC-4.12□□□□□ -3.07
SDC4P31431 RNU6-836P-201ENST00000362920 107 ntBASIC-4.13□□□□□ -3.07
SDC4P31431 MIR548X-201ENST00000580069 75 ntBASIC-4.13□□□□□ -3.07
SDC4P31431 SNORD30.1-201ENST00000391309 70 ntBASIC-4.15□□□□□ -3.07
SDC4P31431 MIR4511-201ENST00000582784 87 ntBASIC-4.15□□□□□ -3.07
SDC4P31431 RNU6-49P-201ENST00000384256 107 ntBASIC-4.16□□□□□ -3.08
SDC4P31431 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.16□□□□□ -3.08
SDC4P31431 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.16□□□□□ -3.08
SDC4P31431 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.16□□□□□ -3.08
SDC4P31431 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.17□□□□□ -3.08
SDC4P31431 RNU6-987P-201ENST00000384759 104 ntBASIC-4.17□□□□□ -3.08
SDC4P31431 RNU6-1131P-201ENST00000364955 107 ntBASIC-4.18□□□□□ -3.08
SDC4P31431 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.18□□□□□ -3.08
SDC4P31431 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.18□□□□□ -3.08
SDC4P31431 MIR548AH-201ENST00000637109 76 ntBASIC-4.18□□□□□ -3.08
SDC4P31431 RNU6-32P-201ENST00000383948 107 ntBASIC-4.2□□□□□ -3.08
SDC4P31431 RNU6-13P-201ENST00000384248 107 ntBASIC-4.2□□□□□ -3.08
SDC4P31431 RNU6-12P-201ENST00000384604 107 ntBASIC-4.2□□□□□ -3.08
SDC4P31431 RNU6-41P-201ENST00000384741 107 ntBASIC-4.2□□□□□ -3.08
SDC4P31431 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-4.21□□□□□ -3.08
SDC4P31431 U7.4-201ENST00000614961 63 ntBASIC-4.21□□□□□ -3.08
SDC4P31431 MIR548H4-201ENST00000408689 111 ntBASIC-4.22□□□□□ -3.08
SDC4P31431 AC103706.3-201ENST00000636297 85 ntBASIC-4.22□□□□□ -3.08
SDC4P31431 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.23□□□□□ -3.09
SDC4P31431 MIR3133-201ENST00000583157 78 ntBASIC-4.23□□□□□ -3.09
SDC4P31431 RNU6-788P-201ENST00000390967 104 ntBASIC-4.24□□□□□ -3.09
SDC4P31431 MIR4666B-201ENST00000578142 81 ntBASIC-4.24□□□□□ -3.09
SDC4P31431 RNU6-1276P-201ENST00000365372 104 ntBASIC-4.26□□□□□ -3.09
SDC4P31431 RNU6-787P-201ENST00000384032 107 ntBASIC-4.26□□□□□ -3.09
SDC4P31431 Y_RNA.545-201ENST00000384652 105 ntBASIC-4.26□□□□□ -3.09
SDC4P31431 MIR494-201ENST00000349529 81 ntBASIC-4.27□□□□□ -3.09
SDC4P31431 U6.111-201ENST00000636093 83 ntBASIC-4.28□□□□□ -3.09
SDC4P31431 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.29□□□□□ -3.1
SDC4P31431 RNU6-242P-201ENST00000384359 107 ntBASIC-4.29□□□□□ -3.1
SDC4P31431 RNU6-1168P-201ENST00000390831 104 ntBASIC-4.29□□□□□ -3.1
SDC4P31431 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.3□□□□□ -3.1
SDC4P31431 RNU6-776P-201ENST00000364403 104 ntBASIC-4.3□□□□□ -3.1
SDC4P31431 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.3□□□□□ -3.1
SDC4P31431 RNU6-147P-201ENST00000383983 107 ntBASIC-4.3□□□□□ -3.1
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms