Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.2□□□□□ -2.44
NID1P14543 RNA5SP275-201ENST00000363936 118 ntBASIC-0.2□□□□□ -2.44
NID1P14543 SNORD14C-201ENST00000365382 88 ntBASIC-0.2□□□□□ -2.44
NID1P14543 AC018880.2-201ENST00000414265 201 ntBASIC-0.2□□□□□ -2.44
NID1P14543 MIR3681-201ENST00000580089 72 ntBASIC-0.2□□□□□ -2.44
NID1P14543 RNU6-485P-201ENST00000363475 107 ntBASIC-0.21□□□□□ -2.44
NID1P14543 RNU6-68P-201ENST00000516576 104 ntBASIC-0.21□□□□□ -2.44
NID1P14543 MIR6818-201ENST00000621576 65 ntBASIC-0.21□□□□□ -2.44
NID1P14543 MIR224-201ENST00000384889 81 ntBASIC-0.22□□□□□ -2.44
NID1P14543 MIR382-201ENST00000637119 76 ntBASIC-0.22□□□□□ -2.44
NID1P14543 SNORD114-25-201ENST00000363742 72 ntBASIC-0.23□□□□□ -2.45
NID1P14543 RNU7-134P-201ENST00000458997 64 ntBASIC-0.23□□□□□ -2.45
NID1P14543 RNU6-695P-201ENST00000391157 104 ntBASIC-0.24□□□□□ -2.45
NID1P14543 MIR548AZ-201ENST00000616567 95 ntBASIC-0.25□□□□□ -2.45
NID1P14543 RNU6-79P-201ENST00000362511 107 ntBASIC-0.26□□□□□ -2.45
NID1P14543 AL500527.2-201ENST00000454105 95 ntBASIC-0.26□□□□□ -2.45
NID1P14543 RNU6-164P-201ENST00000364604 103 ntBASIC-0.27□□□□□ -2.45
NID1P14543 RNA5SP266-201ENST00000410273 108 ntBASIC-0.27□□□□□ -2.45
NID1P14543 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.28□□□□□ -2.45
NID1P14543 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.29□□□□□ -2.46
NID1P14543 snoU83B.1-201ENST00000517136 88 ntBASIC-0.29□□□□□ -2.46
NID1P14543 MIR548AX-201ENST00000580117 73 ntBASIC-0.29□□□□□ -2.46
NID1P14543 MIR6874-201ENST00000635894 71 ntBASIC-0.3□□□□□ -2.46
NID1P14543 RNU6-836P-201ENST00000362920 107 ntBASIC-0.31□□□□□ -2.46
NID1P14543 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.31□□□□□ -2.46
NID1P14543 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.32□□□□□ -2.46
NID1P14543 AC091912.2-201ENST00000624798 167 ntBASIC-0.32□□□□□ -2.46
NID1P14543 RNU6-912P-201ENST00000363800 104 ntBASIC-0.33□□□□□ -2.46
NID1P14543 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.33□□□□□ -2.46
NID1P14543 SCARNA17-201ENST00000516183 144 ntBASIC-0.33□□□□□ -2.46
NID1P14543 MT-TQ-201ENST00000387372 72 ntBASIC-0.34□□□□□ -2.46
NID1P14543 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.35□□□□□ -2.47
NID1P14543 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.35□□□□□ -2.47
NID1P14543 RNU6-576P-201ENST00000390854 102 ntBASIC-0.36□□□□□ -2.47
NID1P14543 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.37□□□□□ -2.47
NID1P14543 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.37□□□□□ -2.47
NID1P14543 SNX3P1X-201ENST00000414887 175 ntBASIC-0.37□□□□□ -2.47
NID1P14543 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.37□□□□□ -2.47
NID1P14543 MIR196A1-201ENST00000388006 70 ntBASIC-0.38□□□□□ -2.47
NID1P14543 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.38□□□□□ -2.47
NID1P14543 MIR4320-201ENST00000636981 65 ntBASIC-0.38□□□□□ -2.47
NID1P14543 RNA5SP224-201ENST00000365069 126 ntBASIC-0.39□□□□□ -2.47
NID1P14543 MIR4499-201ENST00000584834 69 ntBASIC-0.39□□□□□ -2.47
NID1P14543 MIR4723-201ENST00000585070 81 ntBASIC-0.39□□□□□ -2.47
NID1P14543 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.39□□□□□ -2.47
NID1P14543 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.4□□□□□ -2.47
NID1P14543 RNU6-400P-201ENST00000391173 106 ntBASIC-0.4□□□□□ -2.47
NID1P14543 MIR8485-201ENST00000401372 91 ntBASIC-0.4□□□□□ -2.47
NID1P14543 FTX_4.1-201ENST00000616291 147 ntBASIC-0.4□□□□□ -2.47
NID1P14543 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.41□□□□□ -2.48
NID1P14543 MIR587-201ENST00000384845 96 ntBASIC-0.41□□□□□ -2.48
NID1P14543 MIR4324-201ENST00000584846 72 ntBASIC-0.41□□□□□ -2.48
NID1P14543 uc_338.19-201ENST00000616808 99 ntBASIC-0.41□□□□□ -2.48
NID1P14543 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.42□□□□□ -2.48
NID1P14543 MIR548H1-201ENST00000408610 102 ntBASIC-0.42□□□□□ -2.48
NID1P14543 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.43□□□□□ -2.48
NID1P14543 RNU6-10P-201ENST00000384036 107 ntBASIC-0.44□□□□□ -2.48
NID1P14543 MIR548W-201ENST00000581970 74 ntBASIC-0.44□□□□□ -2.48
NID1P14543 MIR3123-201ENST00000583417 75 ntBASIC-0.44□□□□□ -2.48
NID1P14543 MIR6738-201ENST00000619620 64 ntBASIC-0.44□□□□□ -2.48
NID1P14543 SNORD45C-201ENST00000383893 79 ntBASIC-0.45□□□□□ -2.48
NID1P14543 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.45□□□□□ -2.48
NID1P14543 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.45□□□□□ -2.48
NID1P14543 MIR1254-1-201ENST00000408257 97 ntBASIC-0.45□□□□□ -2.48
NID1P14543 snoU13.10-201ENST00000459301 103 ntBASIC-0.45□□□□□ -2.48
NID1P14543 RNA5SP461-201ENST00000516451 104 ntBASIC-0.45□□□□□ -2.48
NID1P14543 MIR3115-201ENST00000577915 68 ntBASIC-0.45□□□□□ -2.48
NID1P14543 U4.2-201ENST00000618561 85 ntBASIC-0.45□□□□□ -2.48
NID1P14543 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.46□□□□□ -2.48
NID1P14543 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.46□□□□□ -2.48
NID1P14543 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.46□□□□□ -2.48
NID1P14543 SNORD83B-201ENST00000386745 93 ntBASIC-0.46□□□□□ -2.48
NID1P14543 MIR378F-201ENST00000578143 78 ntBASIC-0.46□□□□□ -2.48
NID1P14543 MIR6502-201ENST00000617296 76 ntBASIC-0.46□□□□□ -2.48
NID1P14543 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.47□□□□□ -2.48
NID1P14543 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.47□□□□□ -2.48
NID1P14543 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.49□□□□□ -2.49
NID1P14543 SNORD113-3-201ENST00000364830 72 ntBASIC-0.49□□□□□ -2.49
NID1P14543 MIR601-201ENST00000385256 79 ntBASIC-0.49□□□□□ -2.49
NID1P14543 RNU6-345P-201ENST00000517001 107 ntBASIC-0.49□□□□□ -2.49
NID1P14543 MIR656-201ENST00000385224 78 ntBASIC-0.51□□□□□ -2.49
NID1P14543 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.52□□□□□ -2.49
NID1P14543 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.52□□□□□ -2.49
NID1P14543 RNA5SP180-201ENST00000516181 101 ntBASIC-0.52□□□□□ -2.49
NID1P14543 RNU6-1091P-201ENST00000363945 107 ntBASIC-0.53□□□□□ -2.49
NID1P14543 RNU6-841P-201ENST00000383872 107 ntBASIC-0.53□□□□□ -2.49
NID1P14543 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.54□□□□□ -2.5
NID1P14543 MIR4520-1-201ENST00000582609 70 ntBASIC-0.54□□□□□ -2.5
NID1P14543 MIR548AM-201ENST00000584298 74 ntBASIC-0.54□□□□□ -2.5
NID1P14543 RNU6-226P-201ENST00000363778 107 ntBASIC-0.55□□□□□ -2.5
NID1P14543 MIR198-201ENST00000637333 62 ntBASIC-0.55□□□□□ -2.5
NID1P14543 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.56□□□□□ -2.5
NID1P14543 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.56□□□□□ -2.5
NID1P14543 MIR487B-201ENST00000385021 84 ntBASIC-0.56□□□□□ -2.5
NID1P14543 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.56□□□□□ -2.5
NID1P14543 MIR4306-201ENST00000583390 91 ntBASIC-0.56□□□□□ -2.5
NID1P14543 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.56□□□□□ -2.5
NID1P14543 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.56□□□□□ -2.5
NID1P14543 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.58□□□□□ -2.5
NID1P14543 AC097484.2-201ENST00000509147 251 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms