Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.2□□□□□ -2.76
SIX3O95343 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.21□□□□□ -2.76
SIX3O95343 MIR4666B-201ENST00000578142 81 ntBASIC-2.21□□□□□ -2.76
SIX3O95343 RNY4P10-201ENST00000365571 96 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 snoU13.10-201ENST00000459301 103 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 U7.4-201ENST00000614961 63 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 U2.22-201ENST00000636441 106 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.23□□□□□ -2.77
SIX3O95343 RNU6-828P-201ENST00000364876 107 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 RNU6-649P-201ENST00000384463 107 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 MIR509-1-201ENST00000385265 94 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 MIR509-2-201ENST00000390724 91 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 RNU6-663P-201ENST00000391105 106 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 RNU6-231P-201ENST00000517122 103 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 MIR202-201ENST00000362219 110 ntBASIC-2.25□□□□□ -2.77
SIX3O95343 RNU6-787P-201ENST00000384032 107 ntBASIC-2.25□□□□□ -2.77
SIX3O95343 RNU7-160P-201ENST00000516660 62 ntBASIC-2.26□□□□□ -2.77
SIX3O95343 MIR4748-201ENST00000578076 82 ntBASIC-2.26□□□□□ -2.77
SIX3O95343 MIR466-201ENST00000580653 84 ntBASIC-2.26□□□□□ -2.77
SIX3O95343 SNORD30.1-201ENST00000391309 70 ntBASIC-2.27□□□□□ -2.77
SIX3O95343 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.27□□□□□ -2.77
SIX3O95343 SNORD60-201ENST00000383903 83 ntBASIC-2.28□□□□□ -2.77
SIX3O95343 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.28□□□□□ -2.77
SIX3O95343 MIR5582-201ENST00000579697 68 ntBASIC-2.28□□□□□ -2.77
SIX3O95343 RNU6-820P-201ENST00000384273 107 ntBASIC-2.29□□□□□ -2.78
SIX3O95343 RNU6-153P-201ENST00000364422 104 ntBASIC-2.3□□□□□ -2.78
SIX3O95343 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.3□□□□□ -2.78
SIX3O95343 SNORA25.5-201ENST00000363782 126 ntBASIC-2.32□□□□□ -2.78
SIX3O95343 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.32□□□□□ -2.78
SIX3O95343 AC062037.1-201ENST00000605302 128 ntBASIC-2.32□□□□□ -2.78
SIX3O95343 RNU6-530P-201ENST00000391180 107 ntBASIC-2.33□□□□□ -2.78
SIX3O95343 RNU6-634P-201ENST00000459134 106 ntBASIC-2.33□□□□□ -2.78
SIX3O95343 FTX_4.1-201ENST00000616291 147 ntBASIC-2.33□□□□□ -2.78
SIX3O95343 SNORD18C-201ENST00000362704 69 ntBASIC-2.34□□□□□ -2.78
SIX3O95343 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.34□□□□□ -2.78
SIX3O95343 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.35□□□□□ -2.79
SIX3O95343 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.35□□□□□ -2.79
SIX3O95343 SNORA40B-201ENST00000385573 128 ntBASIC-2.36□□□□□ -2.79
SIX3O95343 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
SIX3O95343 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.37□□□□□ -2.79
SIX3O95343 SNORA17.4-201ENST00000391287 132 ntBASIC-2.37□□□□□ -2.79
SIX3O95343 AC097484.2-201ENST00000509147 251 ntBASIC-2.37□□□□□ -2.79
SIX3O95343 SNORA25.4-201ENST00000363666 124 ntBASIC-2.38□□□□□ -2.79
SIX3O95343 MIR581-201ENST00000384895 96 ntBASIC-2.38□□□□□ -2.79
SIX3O95343 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.39□□□□□ -2.79
SIX3O95343 RNU6-573P-201ENST00000383938 106 ntBASIC-2.4□□□□□ -2.79
SIX3O95343 RNU7-119P-201ENST00000459279 63 ntBASIC-2.4□□□□□ -2.79
SIX3O95343 RNU6-122P-201ENST00000516818 107 ntBASIC-2.4□□□□□ -2.79
SIX3O95343 SNORD45.2-201ENST00000363552 72 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.43□□□□□ -2.8
SIX3O95343 RNU6-871P-201ENST00000516122 100 ntBASIC-2.43□□□□□ -2.8
SIX3O95343 SNORA40.16-201ENST00000517238 121 ntBASIC-2.43□□□□□ -2.8
SIX3O95343 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.45□□□□□ -2.8
SIX3O95343 MIR1255A-201ENST00000408338 113 ntBASIC-2.45□□□□□ -2.8
SIX3O95343 MIR548N-201ENST00000408742 75 ntBASIC-2.46□□□□□ -2.8
SIX3O95343 RNY4P9-201ENST00000363194 97 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 RNU6-361P-201ENST00000364454 107 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 RNU6-141P-201ENST00000410499 105 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 MIR4426-201ENST00000640330 63 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 RNU6-940P-201ENST00000363433 104 ntBASIC-2.48□□□□□ -2.81
SIX3O95343 SNORD73B-201ENST00000364394 72 ntBASIC-2.48□□□□□ -2.81
SIX3O95343 MIR3202-2-201ENST00000635980 79 ntBASIC-2.48□□□□□ -2.81
SIX3O95343 U6.111-201ENST00000636093 83 ntBASIC-2.49□□□□□ -2.81
SIX3O95343 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.5□□□□□ -2.81
SIX3O95343 SNORD113-3-201ENST00000364830 72 ntBASIC-2.5□□□□□ -2.81
SIX3O95343 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.51□□□□□ -2.81
SIX3O95343 AL451105.1-201ENST00000450005 189 ntBASIC-2.51□□□□□ -2.81
SIX3O95343 RNU6-857P-201ENST00000515893 110 ntBASIC-2.51□□□□□ -2.81
SIX3O95343 RNU6-300P-201ENST00000459080 104 ntBASIC-2.52□□□□□ -2.81
SIX3O95343 MIR3938-201ENST00000582157 103 ntBASIC-2.52□□□□□ -2.81
SIX3O95343 MIR4511-201ENST00000582784 87 ntBASIC-2.52□□□□□ -2.81
SIX3O95343 RNU6-912P-201ENST00000363800 104 ntBASIC-2.53□□□□□ -2.81
SIX3O95343 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.54□□□□□ -2.82
SIX3O95343 SNORA26.2-201ENST00000390922 122 ntBASIC-2.54□□□□□ -2.82
SIX3O95343 AC103706.3-201ENST00000636297 85 ntBASIC-2.54□□□□□ -2.82
SIX3O95343 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.55□□□□□ -2.82
SIX3O95343 RNU6-539P-201ENST00000516665 103 ntBASIC-2.55□□□□□ -2.82
SIX3O95343 RNA5SP170-201ENST00000517150 101 ntBASIC-2.55□□□□□ -2.82
SIX3O95343 MIR5693-201ENST00000577722 73 ntBASIC-2.56□□□□□ -2.82
SIX3O95343 MIR4679-1-201ENST00000637619 75 ntBASIC-2.56□□□□□ -2.82
SIX3O95343 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
SIX3O95343 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.57□□□□□ -2.82
SIX3O95343 RNU6-590P-201ENST00000365039 107 ntBASIC-2.58□□□□□ -2.82
SIX3O95343 RNU6-800P-201ENST00000384473 103 ntBASIC-2.58□□□□□ -2.82
SIX3O95343 RNY4P29-201ENST00000410801 97 ntBASIC-2.58□□□□□ -2.82
SIX3O95343 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 RNU6-68P-201ENST00000516576 104 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.6□□□□□ -2.83
SIX3O95343 MIR379-201ENST00000362218 67 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms