Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
NPM3O75607 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.42□□□□□ -2.48
NPM3O75607 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
NPM3O75607 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.44□□□□□ -2.48
NPM3O75607 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
NPM3O75607 MIR4636-201ENST00000582271 80 ntBASIC-0.44□□□□□ -2.48
NPM3O75607 RNU6-576P-201ENST00000390854 102 ntBASIC-0.46□□□□□ -2.48
NPM3O75607 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
NPM3O75607 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
NPM3O75607 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.48□□□□□ -2.49
NPM3O75607 MIR548T-201ENST00000408369 74 ntBASIC-0.48□□□□□ -2.49
NPM3O75607 RNA5SP476-201ENST00000516613 103 ntBASIC-0.48□□□□□ -2.49
NPM3O75607 MIR4802-201ENST00000581881 80 ntBASIC-0.48□□□□□ -2.49
NPM3O75607 SNORA32.3-201ENST00000384772 121 ntBASIC-0.52□□□□□ -2.49
NPM3O75607 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
NPM3O75607 RNU6-400P-201ENST00000391173 106 ntBASIC-0.52□□□□□ -2.49
NPM3O75607 MIR4436A-201ENST00000585278 85 ntBASIC-0.52□□□□□ -2.49
NPM3O75607 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
NPM3O75607 MIR101-1-201ENST00000362265 75 ntBASIC-0.54□□□□□ -2.5
NPM3O75607 MIR1254-1-201ENST00000408257 97 ntBASIC-0.54□□□□□ -2.5
NPM3O75607 SNORD114-25-201ENST00000363742 72 ntBASIC-0.55□□□□□ -2.5
NPM3O75607 MIR4493-201ENST00000584016 73 ntBASIC-0.55□□□□□ -2.5
NPM3O75607 RNA5SP451-201ENST00000410588 110 ntBASIC-0.56□□□□□ -2.5
NPM3O75607 MIR6086-201ENST00000638065 55 ntBASIC-0.58□□□□□ -2.5
NPM3O75607 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.59□□□□□ -2.5
NPM3O75607 MIR604-201ENST00000384880 94 ntBASIC-0.59□□□□□ -2.5
NPM3O75607 MIR548H1-201ENST00000408610 102 ntBASIC-0.59□□□□□ -2.5
NPM3O75607 RNA5SP25-201ENST00000410815 110 ntBASIC-0.59□□□□□ -2.5
NPM3O75607 RNA5SP368-201ENST00000364298 116 ntBASIC-0.61□□□□□ -2.51
NPM3O75607 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.61□□□□□ -2.51
NPM3O75607 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
NPM3O75607 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
NPM3O75607 RNU6-758P-201ENST00000516292 89 ntBASIC-0.63□□□□□ -2.51
NPM3O75607 MIR6874-201ENST00000635894 71 ntBASIC-0.64□□□□□ -2.51
NPM3O75607 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.65□□□□□ -2.51
NPM3O75607 AC091912.2-201ENST00000624798 167 ntBASIC-0.65□□□□□ -2.51
NPM3O75607 HAR1A.1-201ENST00000459583 118 ntBASIC-0.66□□□□□ -2.52
NPM3O75607 RNU7-134P-201ENST00000458997 64 ntBASIC-0.68□□□□□ -2.52
NPM3O75607 RNU4-63P-201ENST00000411313 118 ntBASIC-0.69□□□□□ -2.52
NPM3O75607 SNORD95.1-201ENST00000364099 68 ntBASIC-0.74□□□□□ -2.53
NPM3O75607 MT-TQ-201ENST00000387372 72 ntBASIC-0.76□□□□□ -2.53
NPM3O75607 MIR3681-201ENST00000580089 72 ntBASIC-0.76□□□□□ -2.53
NPM3O75607 SNORD114-15-201ENST00000364687 72 ntBASIC-0.77□□□□□ -2.53
NPM3O75607 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.78□□□□□ -2.53
NPM3O75607 RNU6-30P-201ENST00000384561 107 ntBASIC-0.81□□□□□ -2.54
NPM3O75607 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.82□□□□□ -2.54
NPM3O75607 MIR3123-201ENST00000583417 75 ntBASIC-0.82□□□□□ -2.54
NPM3O75607 snoU13.19-201ENST00000459148 104 ntBASIC-0.85□□□□□ -2.55
NPM3O75607 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.87□□□□□ -2.55
NPM3O75607 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.87□□□□□ -2.55
NPM3O75607 snoU13.10-201ENST00000459301 103 ntBASIC-0.88□□□□□ -2.55
NPM3O75607 MIR548AX-201ENST00000580117 73 ntBASIC-0.88□□□□□ -2.55
NPM3O75607 SNORD113-3-201ENST00000364830 72 ntBASIC-0.91□□□□□ -2.56
NPM3O75607 SCARNA17-201ENST00000516183 144 ntBASIC-0.92□□□□□ -2.56
NPM3O75607 MIR548W-201ENST00000581970 74 ntBASIC-0.94□□□□□ -2.56
NPM3O75607 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.97□□□□□ -2.56
NPM3O75607 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
NPM3O75607 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.01□□□□□ -2.57
NPM3O75607 MIR6738-201ENST00000619620 64 ntBASIC-1.01□□□□□ -2.57
NPM3O75607 MIR4324-201ENST00000584846 72 ntBASIC-1.03□□□□□ -2.57
NPM3O75607 MIR587-201ENST00000384845 96 ntBASIC-1.04□□□□□ -2.58
NPM3O75607 RNU6-10P-201ENST00000384036 107 ntBASIC-1.05□□□□□ -2.58
NPM3O75607 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.05□□□□□ -2.58
NPM3O75607 RNU6-841P-201ENST00000383872 107 ntBASIC-1.06□□□□□ -2.58
NPM3O75607 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
NPM3O75607 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
NPM3O75607 RNU6-983P-201ENST00000516004 103 ntBASIC-1.11□□□□□ -2.59
NPM3O75607 uc_338.19-201ENST00000616808 99 ntBASIC-1.11□□□□□ -2.59
NPM3O75607 MIR409-201ENST00000362237 79 ntBASIC-1.12□□□□□ -2.59
NPM3O75607 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
NPM3O75607 MIR4499-201ENST00000584834 69 ntBASIC-1.13□□□□□ -2.59
NPM3O75607 AC097484.2-201ENST00000509147 251 ntBASIC-1.14□□□□□ -2.59
NPM3O75607 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
NPM3O75607 AL627230.5-201ENST00000619807 58 ntBASIC-1.15□□□□□ -2.59
NPM3O75607 RNU6-620P-201ENST00000384017 96 ntBASIC-1.16□□□□□ -2.6
NPM3O75607 RNA5SP266-201ENST00000410273 108 ntBASIC-1.16□□□□□ -2.6
NPM3O75607 MIR3115-201ENST00000577915 68 ntBASIC-1.18□□□□□ -2.6
NPM3O75607 MIR378F-201ENST00000578143 78 ntBASIC-1.18□□□□□ -2.6
NPM3O75607 RNU6-422P-201ENST00000384632 107 ntBASIC-1.19□□□□□ -2.6
NPM3O75607 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.21□□□□□ -2.6
NPM3O75607 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.21□□□□□ -2.6
NPM3O75607 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.21□□□□□ -2.6
NPM3O75607 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.21□□□□□ -2.6
NPM3O75607 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.21□□□□□ -2.6
NPM3O75607 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.21□□□□□ -2.6
NPM3O75607 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.22□□□□□ -2.6
NPM3O75607 MIR548AM-201ENST00000584298 74 ntBASIC-1.23□□□□□ -2.61
NPM3O75607 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.24□□□□□ -2.61
NPM3O75607 MIR3165-201ENST00000579874 75 ntBASIC-1.25□□□□□ -2.61
NPM3O75607 MIR6502-201ENST00000617296 76 ntBASIC-1.27□□□□□ -2.61
NPM3O75607 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.28□□□□□ -2.61
NPM3O75607 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.29□□□□□ -2.62
NPM3O75607 MIR4306-201ENST00000583390 91 ntBASIC-1.29□□□□□ -2.62
NPM3O75607 MIR8485-201ENST00000401372 91 ntBASIC-1.3□□□□□ -2.62
NPM3O75607 RNA5SP461-201ENST00000516451 104 ntBASIC-1.3□□□□□ -2.62
NPM3O75607 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.31□□□□□ -2.62
NPM3O75607 RNU6-854P-201ENST00000364036 107 ntBASIC-1.33□□□□□ -2.62
NPM3O75607 SNX3P1X-201ENST00000414887 175 ntBASIC-1.33□□□□□ -2.62
NPM3O75607 RNA5SP331-201ENST00000364986 107 ntBASIC-1.35□□□□□ -2.63
NPM3O75607 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 273.9 ms