Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SNORA25.5-201ENST00000363782 126 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 RNU6-147P-201ENST00000383983 107 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 RNU6-209P-201ENST00000384118 107 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.9□□□□□ -2.87
SDCBPO00560 RNU6-794P-201ENST00000517261 64 ntBASIC-2.91□□□□□ -2.88
SDCBPO00560 MIR1254-1-201ENST00000408257 97 ntBASIC-2.92□□□□□ -2.88
SDCBPO00560 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.93□□□□□ -2.88
SDCBPO00560 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.94□□□□□ -2.88
SDCBPO00560 RNU7-119P-201ENST00000459279 63 ntBASIC-2.94□□□□□ -2.88
SDCBPO00560 RNU6-411P-201ENST00000384451 107 ntBASIC-2.95□□□□□ -2.88
SDCBPO00560 SNORD54-201ENST00000459159 67 ntBASIC-2.95□□□□□ -2.88
SDCBPO00560 RNU6-176P-201ENST00000517196 105 ntBASIC-2.95□□□□□ -2.88
SDCBPO00560 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.95□□□□□ -2.88
SDCBPO00560 RNU6-742P-201ENST00000365289 107 ntBASIC-2.96□□□□□ -2.88
SDCBPO00560 RNU6-663P-201ENST00000391105 106 ntBASIC-2.96□□□□□ -2.88
SDCBPO00560 RNU6-313P-201ENST00000516317 112 ntBASIC-2.96□□□□□ -2.88
SDCBPO00560 RNU6-634P-201ENST00000459134 106 ntBASIC-2.98□□□□□ -2.89
SDCBPO00560 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.99□□□□□ -2.89
SDCBPO00560 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.01□□□□□ -2.89
SDCBPO00560 RNU6-419P-201ENST00000517030 63 ntBASIC-3.01□□□□□ -2.89
SDCBPO00560 MIR4666B-201ENST00000578142 81 ntBASIC-3.01□□□□□ -2.89
SDCBPO00560 MIR494-201ENST00000349529 81 ntBASIC-3.02□□□□□ -2.89
SDCBPO00560 SNORA25.4-201ENST00000363666 124 ntBASIC-3.02□□□□□ -2.89
SDCBPO00560 RNU6-230P-201ENST00000362457 104 ntBASIC-3.03□□□□□ -2.89
SDCBPO00560 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.03□□□□□ -2.89
SDCBPO00560 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.03□□□□□ -2.89
SDCBPO00560 RNU6-787P-201ENST00000384032 107 ntBASIC-3.03□□□□□ -2.89
SDCBPO00560 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.03□□□□□ -2.89
SDCBPO00560 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.04□□□□□ -2.9
SDCBPO00560 RNU6-345P-201ENST00000517001 107 ntBASIC-3.04□□□□□ -2.9
SDCBPO00560 MIR4719-201ENST00000585233 84 ntBASIC-3.04□□□□□ -2.9
SDCBPO00560 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.06□□□□□ -2.9
SDCBPO00560 RNU6-242P-201ENST00000384359 107 ntBASIC-3.06□□□□□ -2.9
SDCBPO00560 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.07□□□□□ -2.9
SDCBPO00560 U7.4-201ENST00000614961 63 ntBASIC-3.07□□□□□ -2.9
SDCBPO00560 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.08□□□□□ -2.9
SDCBPO00560 AL731768.1-201ENST00000603124 139 ntBASIC-3.08□□□□□ -2.9
SDCBPO00560 RNU6-940P-201ENST00000363433 104 ntBASIC-3.09□□□□□ -2.9
SDCBPO00560 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.09□□□□□ -2.9
SDCBPO00560 SNORD30.1-201ENST00000391309 70 ntBASIC-3.1□□□□□ -2.91
SDCBPO00560 RNA5SP89-201ENST00000410300 108 ntBASIC-3.1□□□□□ -2.91
SDCBPO00560 MIR3938-201ENST00000582157 103 ntBASIC-3.1□□□□□ -2.91
SDCBPO00560 MIR4511-201ENST00000582784 87 ntBASIC-3.11□□□□□ -2.91
SDCBPO00560 RNA5SP93-201ENST00000362525 114 ntBASIC-3.13□□□□□ -2.91
SDCBPO00560 RNU6-215P-201ENST00000365169 102 ntBASIC-3.13□□□□□ -2.91
SDCBPO00560 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.14□□□□□ -2.91
SDCBPO00560 MIR450A2-201ENST00000385022 100 ntBASIC-3.14□□□□□ -2.91
SDCBPO00560 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.15□□□□□ -2.91
SDCBPO00560 SNORD20-201ENST00000384550 80 ntBASIC-3.15□□□□□ -2.91
SDCBPO00560 RNY4P30-201ENST00000410216 95 ntBASIC-3.15□□□□□ -2.91
SDCBPO00560 MIR5693-201ENST00000577722 73 ntBASIC-3.15□□□□□ -2.91
SDCBPO00560 RNU6-919P-201ENST00000516731 104 ntBASIC-3.16□□□□□ -2.92
SDCBPO00560 RNY4P7-201ENST00000364600 96 ntBASIC-3.17□□□□□ -2.92
SDCBPO00560 AC103706.3-201ENST00000636297 85 ntBASIC-3.17□□□□□ -2.92
SDCBPO00560 U6.111-201ENST00000636093 83 ntBASIC-3.18□□□□□ -2.92
SDCBPO00560 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.19□□□□□ -2.92
SDCBPO00560 MIR548M-201ENST00000408260 86 ntBASIC-3.19□□□□□ -2.92
SDCBPO00560 RNY4P25-201ENST00000459254 96 ntBASIC-3.19□□□□□ -2.92
SDCBPO00560 MIR3910-1-201ENST00000580936 111 ntBASIC-3.19□□□□□ -2.92
SDCBPO00560 RNU6-822P-201ENST00000362707 106 ntBASIC-3.2□□□□□ -2.92
SDCBPO00560 RNU6-800P-201ENST00000384473 103 ntBASIC-3.2□□□□□ -2.92
SDCBPO00560 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.21□□□□□ -2.92
SDCBPO00560 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.21□□□□□ -2.92
SDCBPO00560 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.22□□□□□ -2.92
SDCBPO00560 SNORD113-1-201ENST00000365321 69 ntBASIC-3.23□□□□□ -2.93
SDCBPO00560 RNU6-44P-201ENST00000384045 107 ntBASIC-3.23□□□□□ -2.93
SDCBPO00560 MIR548X-201ENST00000580069 75 ntBASIC-3.23□□□□□ -2.93
SDCBPO00560 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.24□□□□□ -2.93
SDCBPO00560 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.24□□□□□ -2.93
SDCBPO00560 RNU6-294P-201ENST00000364999 102 ntBASIC-3.25□□□□□ -2.93
SDCBPO00560 AC139453.2-201ENST00000487255 133 ntBASIC-3.25□□□□□ -2.93
SDCBPO00560 RNU6-871P-201ENST00000516122 100 ntBASIC-3.25□□□□□ -2.93
SDCBPO00560 MT-TR-201ENST00000387439 65 ntBASIC-3.26□□□□□ -2.93
SDCBPO00560 RNU6-539P-201ENST00000516665 103 ntBASIC-3.26□□□□□ -2.93
SDCBPO00560 AC062037.1-201ENST00000605302 128 ntBASIC-3.26□□□□□ -2.93
SDCBPO00560 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.27□□□□□ -2.93
SDCBPO00560 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.28□□□□□ -2.93
SDCBPO00560 AC110620.1-201ENST00000416042 228 ntBASIC-3.29□□□□□ -2.94
SDCBPO00560 snosnR66.1-201ENST00000391095 99 ntBASIC-3.3□□□□□ -2.94
SDCBPO00560 RNU6-153P-201ENST00000364422 104 ntBASIC-3.31□□□□□ -2.94
SDCBPO00560 RNU6-820P-201ENST00000384273 107 ntBASIC-3.31□□□□□ -2.94
SDCBPO00560 RNU6-406P-201ENST00000516470 107 ntBASIC-3.31□□□□□ -2.94
SDCBPO00560 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.32□□□□□ -2.94
SDCBPO00560 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.33□□□□□ -2.94
SDCBPO00560 RNA5SP224-201ENST00000365069 126 ntBASIC-3.33□□□□□ -2.94
SDCBPO00560 MIR3668-201ENST00000582138 75 ntBASIC-3.33□□□□□ -2.94
SDCBPO00560 AL359920.1-201ENST00000618332 176 ntBASIC-3.33□□□□□ -2.94
SDCBPO00560 MIR4317-201ENST00000637586 65 ntBASIC-3.33□□□□□ -2.94
SDCBPO00560 RNU6-737P-201ENST00000365370 107 ntBASIC-3.34□□□□□ -2.94
SDCBPO00560 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.35□□□□□ -2.95
SDCBPO00560 AL606753.1-201ENST00000427435 87 ntBASIC-3.35□□□□□ -2.95
SDCBPO00560 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.35□□□□□ -2.95
SDCBPO00560 MIR4679-1-201ENST00000637619 75 ntBASIC-3.35□□□□□ -2.95
SDCBPO00560 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.36□□□□□ -2.95
SDCBPO00560 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.36□□□□□ -2.95
SDCBPO00560 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.36□□□□□ -2.95
SDCBPO00560 MIR656-201ENST00000385224 78 ntBASIC-3.36□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms