Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Y_RNA.583-201ENST00000391033 113 ntBASIC0.08□□□□□ -2.4
ZC3H4Q9UPT8 RNA5SP451-201ENST00000410588 110 ntBASIC0.08□□□□□ -2.4
ZC3H4Q9UPT8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.08□□□□□ -2.4
ZC3H4Q9UPT8 AC093726.3-201ENST00000637588 150 ntBASIC0.08□□□□□ -2.4
ZC3H4Q9UPT8 MIR4263-201ENST00000584745 83 ntBASIC0.07□□□□□ -2.4
ZC3H4Q9UPT8 RNY4P27-201ENST00000363341 96 ntBASIC0.06□□□□□ -2.4
ZC3H4Q9UPT8 SNORD45.2-201ENST00000363552 72 ntBASIC0.06□□□□□ -2.4
ZC3H4Q9UPT8 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.06□□□□□ -2.4
ZC3H4Q9UPT8 SNORA32.1-201ENST00000364514 115 ntBASIC0.05□□□□□ -2.4
ZC3H4Q9UPT8 MIR8064-201ENST00000612863 90 ntBASIC0.05□□□□□ -2.4
ZC3H4Q9UPT8 Y_RNA.55-201ENST00000362797 102 ntBASIC0.04□□□□□ -2.4
ZC3H4Q9UPT8 SNORD19-201ENST00000391191 68 ntBASIC0.04□□□□□ -2.4
ZC3H4Q9UPT8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.04□□□□□ -2.4
ZC3H4Q9UPT8 MTRNR2L9-201ENST00000622562 75 ntBASIC0.04□□□□□ -2.4
ZC3H4Q9UPT8 MIR204-201ENST00000385200 110 ntBASIC0.03□□□□□ -2.4
ZC3H4Q9UPT8 SNORD22.1-201ENST00000516331 125 ntBASIC0.03□□□□□ -2.4
ZC3H4Q9UPT8 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
ZC3H4Q9UPT8 RNU6-838P-201ENST00000363399 108 ntBASIC0.02□□□□□ -2.41
ZC3H4Q9UPT8 Y_RNA.321-201ENST00000365149 102 ntBASIC0.02□□□□□ -2.41
ZC3H4Q9UPT8 MIR587-201ENST00000384845 96 ntBASIC0.02□□□□□ -2.41
ZC3H4Q9UPT8 MIR518B-201ENST00000385127 83 ntBASIC0.01□□□□□ -2.41
ZC3H4Q9UPT8 AL590491.3-201ENST00000610731 82 ntBASIC0.01□□□□□ -2.41
ZC3H4Q9UPT8 Y_RNA.228-201ENST00000364346 98 ntBASIC0□□□□□ -2.41
ZC3H4Q9UPT8 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.01□□□□□ -2.41
ZC3H4Q9UPT8 SNORD74.6-201ENST00000364796 70 ntBASIC-0.01□□□□□ -2.41
ZC3H4Q9UPT8 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.01□□□□□ -2.41
ZC3H4Q9UPT8 MIR3681-201ENST00000580089 72 ntBASIC-0.01□□□□□ -2.41
ZC3H4Q9UPT8 RNA5SP461-201ENST00000516451 104 ntBASIC-0.02□□□□□ -2.41
ZC3H4Q9UPT8 RNY4P7-201ENST00000364600 96 ntBASIC-0.03□□□□□ -2.41
ZC3H4Q9UPT8 MIR520D-201ENST00000385002 87 ntBASIC-0.03□□□□□ -2.41
ZC3H4Q9UPT8 SNORA26.4-201ENST00000391188 123 ntBASIC-0.03□□□□□ -2.41
ZC3H4Q9UPT8 AL353691.2-201ENST00000443795 59 ntBASIC-0.03□□□□□ -2.41
ZC3H4Q9UPT8 MIR4788-201ENST00000639104 80 ntBASIC-0.03□□□□□ -2.41
ZC3H4Q9UPT8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.04□□□□□ -2.42
ZC3H4Q9UPT8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.04□□□□□ -2.42
ZC3H4Q9UPT8 MIR548F3-201ENST00000408509 87 ntBASIC-0.04□□□□□ -2.42
ZC3H4Q9UPT8 MIR5683-201ENST00000636514 76 ntBASIC-0.04□□□□□ -2.42
ZC3H4Q9UPT8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
ZC3H4Q9UPT8 RNU6-530P-201ENST00000391180 107 ntBASIC-0.05□□□□□ -2.42
ZC3H4Q9UPT8 MIR3666-201ENST00000607845 111 ntBASIC-0.05□□□□□ -2.42
ZC3H4Q9UPT8 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.06□□□□□ -2.42
ZC3H4Q9UPT8 AP000533.3-201ENST00000447704 118 ntBASIC-0.06□□□□□ -2.42
ZC3H4Q9UPT8 MIR3179-1-201ENST00000578940 84 ntBASIC-0.06□□□□□ -2.42
ZC3H4Q9UPT8 MIR3179-2-201ENST00000579107 84 ntBASIC-0.06□□□□□ -2.42
ZC3H4Q9UPT8 MIR3179-3-201ENST00000579566 84 ntBASIC-0.06□□□□□ -2.42
ZC3H4Q9UPT8 MIR3179-4-201ENST00000617599 84 ntBASIC-0.06□□□□□ -2.42
ZC3H4Q9UPT8 MIR365A-201ENST00000362260 87 ntBASIC-0.07□□□□□ -2.42
ZC3H4Q9UPT8 SNORD114-17-201ENST00000364699 75 ntBASIC-0.07□□□□□ -2.42
ZC3H4Q9UPT8 RNU6-258P-201ENST00000390884 101 ntBASIC-0.07□□□□□ -2.42
ZC3H4Q9UPT8 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
ZC3H4Q9UPT8 SNORA32.3-201ENST00000384772 121 ntBASIC-0.08□□□□□ -2.42
ZC3H4Q9UPT8 AP002795.1-201ENST00000534879 84 ntBASIC-0.08□□□□□ -2.42
ZC3H4Q9UPT8 RNU6-10P-201ENST00000384036 107 ntBASIC-0.09□□□□□ -2.42
ZC3H4Q9UPT8 MIR545-201ENST00000385085 106 ntBASIC-0.09□□□□□ -2.42
ZC3H4Q9UPT8 RNA5SP180-201ENST00000516181 101 ntBASIC-0.09□□□□□ -2.42
ZC3H4Q9UPT8 MIR378F-201ENST00000578143 78 ntBASIC-0.09□□□□□ -2.42
ZC3H4Q9UPT8 MIR548AL-201ENST00000578416 97 ntBASIC-0.09□□□□□ -2.42
ZC3H4Q9UPT8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.1□□□□□ -2.42
ZC3H4Q9UPT8 MT-TQ-201ENST00000387372 72 ntBASIC-0.1□□□□□ -2.42
ZC3H4Q9UPT8 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.1□□□□□ -2.42
ZC3H4Q9UPT8 SNORD4A-201ENST00000459174 72 ntBASIC-0.1□□□□□ -2.42
ZC3H4Q9UPT8 MIR4441-201ENST00000582623 100 ntBASIC-0.1□□□□□ -2.42
ZC3H4Q9UPT8 SNORD115-33-201ENST00000363723 82 ntBASIC-0.11□□□□□ -2.43
ZC3H4Q9UPT8 MIR29B1-201ENST00000385015 81 ntBASIC-0.11□□□□□ -2.43
ZC3H4Q9UPT8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.11□□□□□ -2.43
ZC3H4Q9UPT8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.13□□□□□ -2.43
ZC3H4Q9UPT8 SNORA27.2-201ENST00000363365 126 ntBASIC-0.13□□□□□ -2.43
ZC3H4Q9UPT8 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.13□□□□□ -2.43
ZC3H4Q9UPT8 MIR4324-201ENST00000584846 72 ntBASIC-0.13□□□□□ -2.43
ZC3H4Q9UPT8 MIR6738-201ENST00000619620 64 ntBASIC-0.13□□□□□ -2.43
ZC3H4Q9UPT8 SNORA13-201ENST00000458790 133 ntBASIC-0.14□□□□□ -2.43
ZC3H4Q9UPT8 SCARNA17-201ENST00000516183 144 ntBASIC-0.15□□□□□ -2.43
ZC3H4Q9UPT8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.15□□□□□ -2.43
ZC3H4Q9UPT8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.16□□□□□ -2.44
ZC3H4Q9UPT8 MIR548AZ-201ENST00000616567 95 ntBASIC-0.16□□□□□ -2.44
ZC3H4Q9UPT8 MIR1285-2-201ENST00000408311 88 ntBASIC-0.17□□□□□ -2.44
ZC3H4Q9UPT8 RNY4-201ENST00000516507 96 ntBASIC-0.17□□□□□ -2.44
ZC3H4Q9UPT8 MIR507-201ENST00000385234 94 ntBASIC-0.19□□□□□ -2.44
ZC3H4Q9UPT8 RPL35AP4-201ENST00000412007 102 ntBASIC-0.19□□□□□ -2.44
ZC3H4Q9UPT8 MIR3115-201ENST00000577915 68 ntBASIC-0.19□□□□□ -2.44
ZC3H4Q9UPT8 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.2□□□□□ -2.44
ZC3H4Q9UPT8 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.2□□□□□ -2.44
ZC3H4Q9UPT8 RNU6-721P-201ENST00000410155 105 ntBASIC-0.2□□□□□ -2.44
ZC3H4Q9UPT8 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.2□□□□□ -2.44
ZC3H4Q9UPT8 RNU6-608P-201ENST00000383927 104 ntBASIC-0.21□□□□□ -2.44
ZC3H4Q9UPT8 SNORD126-201ENST00000459475 77 ntBASIC-0.21□□□□□ -2.44
ZC3H4Q9UPT8 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.22□□□□□ -2.44
ZC3H4Q9UPT8 RNU6-986P-201ENST00000363133 102 ntBASIC-0.23□□□□□ -2.45
ZC3H4Q9UPT8 RNU6-742P-201ENST00000365289 107 ntBASIC-0.23□□□□□ -2.45
ZC3H4Q9UPT8 MIR496-201ENST00000385226 102 ntBASIC-0.24□□□□□ -2.45
ZC3H4Q9UPT8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.24□□□□□ -2.45
ZC3H4Q9UPT8 AC021146.6-201ENST00000514659 117 ntBASIC-0.25□□□□□ -2.45
ZC3H4Q9UPT8 SNORD14C-201ENST00000365382 88 ntBASIC-0.26□□□□□ -2.45
ZC3H4Q9UPT8 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
ZC3H4Q9UPT8 MIR4426-201ENST00000640330 63 ntBASIC-0.26□□□□□ -2.45
ZC3H4Q9UPT8 RNY3P8-201ENST00000411366 126 ntBASIC-0.27□□□□□ -2.45
ZC3H4Q9UPT8 MIR202-201ENST00000362219 110 ntBASIC-0.3□□□□□ -2.46
ZC3H4Q9UPT8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.31□□□□□ -2.46
ZC3H4Q9UPT8 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.32□□□□□ -2.46
ZC3H4Q9UPT8 RNA5SP93-201ENST00000362525 114 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms