Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNY3P8-201ENST00000411366 126 ntBASIC-1.83□□□□□ -2.7
CLCF1Q9UBD9 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.83□□□□□ -2.7
CLCF1Q9UBD9 MIR494-201ENST00000349529 81 ntBASIC-1.84□□□□□ -2.7
CLCF1Q9UBD9 MIR365A-201ENST00000362260 87 ntBASIC-1.84□□□□□ -2.7
CLCF1Q9UBD9 AC108019.1-201ENST00000512540 175 ntBASIC-1.84□□□□□ -2.7
CLCF1Q9UBD9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.84□□□□□ -2.7
CLCF1Q9UBD9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.85□□□□□ -2.71
CLCF1Q9UBD9 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.85□□□□□ -2.71
CLCF1Q9UBD9 MIR1285-2-201ENST00000408311 88 ntBASIC-1.85□□□□□ -2.71
CLCF1Q9UBD9 RNU6-542P-201ENST00000516405 103 ntBASIC-1.85□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.85□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.86□□□□□ -2.71
CLCF1Q9UBD9 SNORD115-31-201ENST00000365318 82 ntBASIC-1.86□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.86□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.87□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.87□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.87□□□□□ -2.71
CLCF1Q9UBD9 MIR4666B-201ENST00000578142 81 ntBASIC-1.87□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.87□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.87□□□□□ -2.71
CLCF1Q9UBD9 RNU6-153P-201ENST00000364422 104 ntBASIC-1.88□□□□□ -2.71
CLCF1Q9UBD9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.88□□□□□ -2.71
CLCF1Q9UBD9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.88□□□□□ -2.71
CLCF1Q9UBD9 MIR3134-201ENST00000579433 74 ntBASIC-1.88□□□□□ -2.71
CLCF1Q9UBD9 RNU6-294P-201ENST00000364999 102 ntBASIC-1.89□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.89□□□□□ -2.71
CLCF1Q9UBD9 SNORA27.2-201ENST00000363365 126 ntBASIC-1.9□□□□□ -2.71
CLCF1Q9UBD9 SNORD114-3-201ENST00000364969 75 ntBASIC-1.9□□□□□ -2.71
CLCF1Q9UBD9 RNU6-687P-201ENST00000516443 89 ntBASIC-1.9□□□□□ -2.71
CLCF1Q9UBD9 RNU6-92P-201ENST00000605893 104 ntBASIC-1.9□□□□□ -2.71
CLCF1Q9UBD9 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.9□□□□□ -2.71
CLCF1Q9UBD9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
CLCF1Q9UBD9 RNU6-523P-201ENST00000516304 54 ntBASIC-1.91□□□□□ -2.72
CLCF1Q9UBD9 MIR4441-201ENST00000582623 100 ntBASIC-1.91□□□□□ -2.72
CLCF1Q9UBD9 MIR548AM-201ENST00000584298 74 ntBASIC-1.91□□□□□ -2.72
CLCF1Q9UBD9 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.92□□□□□ -2.72
CLCF1Q9UBD9 RNU6-411P-201ENST00000384451 107 ntBASIC-1.92□□□□□ -2.72
CLCF1Q9UBD9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.92□□□□□ -2.72
CLCF1Q9UBD9 RNU6-820P-201ENST00000384273 107 ntBASIC-1.93□□□□□ -2.72
CLCF1Q9UBD9 MIR125B1-201ENST00000385236 88 ntBASIC-1.93□□□□□ -2.72
CLCF1Q9UBD9 RNU6-841P-201ENST00000383872 107 ntBASIC-1.94□□□□□ -2.72
CLCF1Q9UBD9 RNU4-88P-201ENST00000411220 86 ntBASIC-1.94□□□□□ -2.72
CLCF1Q9UBD9 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.95□□□□□ -2.72
CLCF1Q9UBD9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.95□□□□□ -2.72
CLCF1Q9UBD9 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.95□□□□□ -2.72
CLCF1Q9UBD9 U4.2-201ENST00000618561 85 ntBASIC-1.95□□□□□ -2.72
CLCF1Q9UBD9 U2.22-201ENST00000636441 106 ntBASIC-1.95□□□□□ -2.72
CLCF1Q9UBD9 U7.4-201ENST00000614961 63 ntBASIC-1.96□□□□□ -2.72
CLCF1Q9UBD9 MIR581-201ENST00000384895 96 ntBASIC-1.97□□□□□ -2.72
CLCF1Q9UBD9 snoU13.10-201ENST00000459301 103 ntBASIC-1.97□□□□□ -2.72
CLCF1Q9UBD9 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.97□□□□□ -2.72
CLCF1Q9UBD9 RNU6-980P-201ENST00000516925 103 ntBASIC-1.97□□□□□ -2.72
CLCF1Q9UBD9 RNU6-810P-201ENST00000364001 107 ntBASIC-1.98□□□□□ -2.73
CLCF1Q9UBD9 RNU7-160P-201ENST00000516660 62 ntBASIC-1.98□□□□□ -2.73
CLCF1Q9UBD9 MIR548W-201ENST00000581970 74 ntBASIC-1.98□□□□□ -2.73
CLCF1Q9UBD9 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.99□□□□□ -2.73
CLCF1Q9UBD9 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.99□□□□□ -2.73
CLCF1Q9UBD9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.99□□□□□ -2.73
CLCF1Q9UBD9 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.99□□□□□ -2.73
CLCF1Q9UBD9 Y_RNA.69-201ENST00000362885 109 ntBASIC-2□□□□□ -2.73
CLCF1Q9UBD9 RNU6-787P-201ENST00000384032 107 ntBASIC-2□□□□□ -2.73
CLCF1Q9UBD9 MIR1207-201ENST00000408249 87 ntBASIC-2□□□□□ -2.73
CLCF1Q9UBD9 RNU6-1015P-201ENST00000517121 99 ntBASIC-2□□□□□ -2.73
CLCF1Q9UBD9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2□□□□□ -2.73
CLCF1Q9UBD9 MIR664B-201ENST00000626756 61 ntBASIC-2□□□□□ -2.73
CLCF1Q9UBD9 MIR202-201ENST00000362219 110 ntBASIC-2.01□□□□□ -2.73
CLCF1Q9UBD9 SNORD60.1-201ENST00000362451 73 ntBASIC-2.01□□□□□ -2.73
CLCF1Q9UBD9 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.01□□□□□ -2.73
CLCF1Q9UBD9 MIR5582-201ENST00000579697 68 ntBASIC-2.01□□□□□ -2.73
CLCF1Q9UBD9 MIR7110-201ENST00000612638 86 ntBASIC-2.01□□□□□ -2.73
CLCF1Q9UBD9 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.02□□□□□ -2.73
CLCF1Q9UBD9 RNU6-520P-201ENST00000384717 104 ntBASIC-2.02□□□□□ -2.73
CLCF1Q9UBD9 SNORD116.2-201ENST00000391251 93 ntBASIC-2.02□□□□□ -2.73
CLCF1Q9UBD9 RNU6-634P-201ENST00000459134 106 ntBASIC-2.02□□□□□ -2.73
CLCF1Q9UBD9 RNU6-649P-201ENST00000384463 107 ntBASIC-2.04□□□□□ -2.74
CLCF1Q9UBD9 RNU6-663P-201ENST00000391105 106 ntBASIC-2.04□□□□□ -2.74
CLCF1Q9UBD9 RNU6-828P-201ENST00000364876 107 ntBASIC-2.05□□□□□ -2.74
CLCF1Q9UBD9 RNU6-231P-201ENST00000517122 103 ntBASIC-2.05□□□□□ -2.74
CLCF1Q9UBD9 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.06□□□□□ -2.74
CLCF1Q9UBD9 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.07□□□□□ -2.74
CLCF1Q9UBD9 AC062037.1-201ENST00000605302 128 ntBASIC-2.07□□□□□ -2.74
CLCF1Q9UBD9 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.09□□□□□ -2.74
CLCF1Q9UBD9 SNORA25.4-201ENST00000363666 124 ntBASIC-2.1□□□□□ -2.75
CLCF1Q9UBD9 SNORA25.5-201ENST00000363782 126 ntBASIC-2.1□□□□□ -2.75
CLCF1Q9UBD9 MIR3202-2-201ENST00000635980 79 ntBASIC-2.1□□□□□ -2.75
CLCF1Q9UBD9 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.11□□□□□ -2.75
CLCF1Q9UBD9 SNORD18C-201ENST00000362704 69 ntBASIC-2.12□□□□□ -2.75
CLCF1Q9UBD9 RNU6-530P-201ENST00000391180 107 ntBASIC-2.12□□□□□ -2.75
CLCF1Q9UBD9 SNORD30.1-201ENST00000391309 70 ntBASIC-2.12□□□□□ -2.75
CLCF1Q9UBD9 RNU6-871P-201ENST00000516122 100 ntBASIC-2.12□□□□□ -2.75
CLCF1Q9UBD9 RNU6-122P-201ENST00000516818 107 ntBASIC-2.12□□□□□ -2.75
CLCF1Q9UBD9 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.13□□□□□ -2.75
CLCF1Q9UBD9 RNU6-194P-201ENST00000363862 105 ntBASIC-2.13□□□□□ -2.75
CLCF1Q9UBD9 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.13□□□□□ -2.75
CLCF1Q9UBD9 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.13□□□□□ -2.75
CLCF1Q9UBD9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.13□□□□□ -2.75
CLCF1Q9UBD9 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.14□□□□□ -2.75
CLCF1Q9UBD9 RNA5SP405-201ENST00000363059 114 ntBASIC-2.14□□□□□ -2.75
CLCF1Q9UBD9 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.14□□□□□ -2.75
CLCF1Q9UBD9 SNORD60-201ENST00000383903 83 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms