Protein–RNA interactions for Protein: Q9H2Z4

NKX2-4, Homeobox protein Nkx-2.4, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4Q9H2Z4 SNORD1B-201ENST00000363091 84 ntBASIC-0.36□□□□□ -2.47
NKX2-4Q9H2Z4 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.36□□□□□ -2.47
NKX2-4Q9H2Z4 MIR520D-201ENST00000385002 87 ntBASIC-0.36□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-696P-201ENST00000390834 107 ntBASIC-0.36□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.37□□□□□ -2.47
NKX2-4Q9H2Z4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.37□□□□□ -2.47
NKX2-4Q9H2Z4 MIR6738-201ENST00000619620 64 ntBASIC-0.37□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.38□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.38□□□□□ -2.47
NKX2-4Q9H2Z4 MIR6502-201ENST00000617296 76 ntBASIC-0.38□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-10P-201ENST00000384036 107 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 MT-TQ-201ENST00000387372 72 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-258P-201ENST00000390884 101 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 MIR3938-201ENST00000582157 103 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 MIR4306-201ENST00000583390 91 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 MIR7978-201ENST00000636158 59 ntBASIC-0.39□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-608P-201ENST00000383927 104 ntBASIC-0.4□□□□□ -2.47
NKX2-4Q9H2Z4 SNORD83B-201ENST00000386745 93 ntBASIC-0.4□□□□□ -2.47
NKX2-4Q9H2Z4 MIR3170-201ENST00000582699 77 ntBASIC-0.4□□□□□ -2.47
NKX2-4Q9H2Z4 uc_338.19-201ENST00000616808 99 ntBASIC-0.4□□□□□ -2.47
NKX2-4Q9H2Z4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.4□□□□□ -2.47
NKX2-4Q9H2Z4 MIR5683-201ENST00000636514 76 ntBASIC-0.4□□□□□ -2.47
NKX2-4Q9H2Z4 RNU6-974P-201ENST00000384099 108 ntBASIC-0.41□□□□□ -2.48
NKX2-4Q9H2Z4 RNU6-172P-201ENST00000411000 93 ntBASIC-0.41□□□□□ -2.48
NKX2-4Q9H2Z4 RPL35AP4-201ENST00000412007 102 ntBASIC-0.41□□□□□ -2.48
NKX2-4Q9H2Z4 AL353691.2-201ENST00000443795 59 ntBASIC-0.41□□□□□ -2.48
NKX2-4Q9H2Z4 RNU7-151P-201ENST00000516930 53 ntBASIC-0.41□□□□□ -2.48
NKX2-4Q9H2Z4 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.42□□□□□ -2.48
NKX2-4Q9H2Z4 MIR125B1-201ENST00000385236 88 ntBASIC-0.42□□□□□ -2.48
NKX2-4Q9H2Z4 AC090616.4-201ENST00000448026 115 ntBASIC-0.42□□□□□ -2.48
NKX2-4Q9H2Z4 MIR6818-201ENST00000621576 65 ntBASIC-0.42□□□□□ -2.48
NKX2-4Q9H2Z4 MIR6874-201ENST00000635894 71 ntBASIC-0.42□□□□□ -2.48
NKX2-4Q9H2Z4 MIR548AA1-201ENST00000384971 97 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 MIR29B1-201ENST00000385015 81 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 MIR487B-201ENST00000385021 84 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 MIR579-201ENST00000385221 98 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 RNU6-231P-201ENST00000517122 103 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 MIR4490-201ENST00000582647 84 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 AC091912.2-201ENST00000624798 167 ntBASIC-0.43□□□□□ -2.48
NKX2-4Q9H2Z4 RNU6-446P-201ENST00000362827 106 ntBASIC-0.44□□□□□ -2.48
NKX2-4Q9H2Z4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.44□□□□□ -2.48
NKX2-4Q9H2Z4 RNA5SP86-201ENST00000390869 98 ntBASIC-0.44□□□□□ -2.48
NKX2-4Q9H2Z4 MIR548Q-201ENST00000408404 100 ntBASIC-0.44□□□□□ -2.48
NKX2-4Q9H2Z4 SNORA40.16-201ENST00000517238 121 ntBASIC-0.44□□□□□ -2.48
NKX2-4Q9H2Z4 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.45□□□□□ -2.48
NKX2-4Q9H2Z4 MIR507-201ENST00000385234 94 ntBASIC-0.45□□□□□ -2.48
NKX2-4Q9H2Z4 RNU7-119P-201ENST00000459279 63 ntBASIC-0.45□□□□□ -2.48
NKX2-4Q9H2Z4 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.46□□□□□ -2.48
NKX2-4Q9H2Z4 RNU6-810P-201ENST00000364001 107 ntBASIC-0.46□□□□□ -2.48
NKX2-4Q9H2Z4 MIR7110-201ENST00000612638 86 ntBASIC-0.46□□□□□ -2.48
NKX2-4Q9H2Z4 MIR4320-201ENST00000636981 65 ntBASIC-0.46□□□□□ -2.48
NKX2-4Q9H2Z4 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.47□□□□□ -2.48
NKX2-4Q9H2Z4 MIR587-201ENST00000384845 96 ntBASIC-0.47□□□□□ -2.48
NKX2-4Q9H2Z4 MIR5591-201ENST00000578248 65 ntBASIC-0.47□□□□□ -2.48
NKX2-4Q9H2Z4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
NKX2-4Q9H2Z4 RNA5SP180-201ENST00000516181 101 ntBASIC-0.48□□□□□ -2.49
NKX2-4Q9H2Z4 MIR4756-201ENST00000577874 78 ntBASIC-0.48□□□□□ -2.49
NKX2-4Q9H2Z4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.48□□□□□ -2.49
NKX2-4Q9H2Z4 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.49□□□□□ -2.49
NKX2-4Q9H2Z4 SNORD116.2-201ENST00000391251 93 ntBASIC-0.49□□□□□ -2.49
NKX2-4Q9H2Z4 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.49□□□□□ -2.49
NKX2-4Q9H2Z4 snoU83B.1-201ENST00000517136 88 ntBASIC-0.49□□□□□ -2.49
NKX2-4Q9H2Z4 MIR4520-1-201ENST00000582609 70 ntBASIC-0.49□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-164P-201ENST00000364604 103 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 SNORD113-4-201ENST00000364802 75 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-520P-201ENST00000384717 104 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 SNORA40B-201ENST00000385573 128 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 SNORD63.2-201ENST00000516303 64 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 RNU7-160P-201ENST00000516660 62 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 MIR1246-201ENST00000636535 73 ntBASIC-0.5□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-79P-201ENST00000362511 107 ntBASIC-0.51□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-995P-201ENST00000391244 107 ntBASIC-0.51□□□□□ -2.49
NKX2-4Q9H2Z4 SNORA27.2-201ENST00000363365 126 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-563P-201ENST00000364872 108 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 MIR633-201ENST00000384821 98 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 HLA-S-202ENST00000425174 53 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 AC108019.1-201ENST00000512540 175 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-706P-201ENST00000517229 104 ntBASIC-0.52□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-829P-201ENST00000363700 112 ntBASIC-0.53□□□□□ -2.49
NKX2-4Q9H2Z4 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.53□□□□□ -2.49
NKX2-4Q9H2Z4 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.53□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.53□□□□□ -2.49
NKX2-4Q9H2Z4 MIR4770-201ENST00000579149 58 ntBASIC-0.53□□□□□ -2.49
NKX2-4Q9H2Z4 AC013734.1-201ENST00000619329 111 ntBASIC-0.53□□□□□ -2.49
NKX2-4Q9H2Z4 RNU6-983P-201ENST00000516004 103 ntBASIC-0.54□□□□□ -2.5
NKX2-4Q9H2Z4 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.54□□□□□ -2.5
NKX2-4Q9H2Z4 AC138207.3-201ENST00000585289 166 ntBASIC-0.54□□□□□ -2.5
NKX2-4Q9H2Z4 RNU6-247P-201ENST00000362636 107 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 SNORD18.1-201ENST00000363807 70 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 RNY3P8-201ENST00000411366 126 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 RNU6-419P-201ENST00000517030 63 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 AC120024.2-201ENST00000576526 175 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.55□□□□□ -2.5
NKX2-4Q9H2Z4 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.56□□□□□ -2.5
NKX2-4Q9H2Z4 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms