Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 SNORD18C-201ENST00000362704 69 ntBASIC-2.77□□□□□ -2.85
NKX6-2Q9C056 SNORA40.13-201ENST00000516379 120 ntBASIC-2.77□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.78□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.78□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.78□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.78□□□□□ -2.85
NKX6-2Q9C056 RNU6-789P-201ENST00000517105 102 ntBASIC-2.78□□□□□ -2.85
NKX6-2Q9C056 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.79□□□□□ -2.86
NKX6-2Q9C056 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.79□□□□□ -2.86
NKX6-2Q9C056 RNU6-959P-201ENST00000384671 107 ntBASIC-2.8□□□□□ -2.86
NKX6-2Q9C056 AL365222.1-201ENST00000614661 98 ntBASIC-2.8□□□□□ -2.86
NKX6-2Q9C056 RNU6-895P-201ENST00000384125 103 ntBASIC-2.81□□□□□ -2.86
NKX6-2Q9C056 RNU6-675P-201ENST00000384236 104 ntBASIC-2.81□□□□□ -2.86
NKX6-2Q9C056 RNU6-141P-201ENST00000410499 105 ntBASIC-2.81□□□□□ -2.86
NKX6-2Q9C056 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.81□□□□□ -2.86
NKX6-2Q9C056 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.81□□□□□ -2.86
NKX6-2Q9C056 RNU6-649P-201ENST00000384463 107 ntBASIC-2.82□□□□□ -2.86
NKX6-2Q9C056 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.82□□□□□ -2.86
NKX6-2Q9C056 RNU6-520P-201ENST00000384717 104 ntBASIC-2.82□□□□□ -2.86
NKX6-2Q9C056 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.82□□□□□ -2.86
NKX6-2Q9C056 MIR3133-201ENST00000583157 78 ntBASIC-2.82□□□□□ -2.86
NKX6-2Q9C056 MIR202-201ENST00000362219 110 ntBASIC-2.83□□□□□ -2.86
NKX6-2Q9C056 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.83□□□□□ -2.86
NKX6-2Q9C056 MIR154-201ENST00000385243 84 ntBASIC-2.83□□□□□ -2.86
NKX6-2Q9C056 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.83□□□□□ -2.86
NKX6-2Q9C056 RNU6-315P-201ENST00000362666 107 ntBASIC-2.84□□□□□ -2.86
NKX6-2Q9C056 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.84□□□□□ -2.86
NKX6-2Q9C056 SNORD116-24-201ENST00000384549 92 ntBASIC-2.84□□□□□ -2.86
NKX6-2Q9C056 SNORD60-201ENST00000383903 83 ntBASIC-2.85□□□□□ -2.87
NKX6-2Q9C056 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.85□□□□□ -2.87
NKX6-2Q9C056 RNU6-844P-201ENST00000517175 102 ntBASIC-2.85□□□□□ -2.87
NKX6-2Q9C056 RNY1P1-201ENST00000364372 112 ntBASIC-2.86□□□□□ -2.87
NKX6-2Q9C056 RNU6-828P-201ENST00000364876 107 ntBASIC-2.86□□□□□ -2.87
NKX6-2Q9C056 MIR488-201ENST00000365739 83 ntBASIC-2.86□□□□□ -2.87
NKX6-2Q9C056 MIR581-201ENST00000384895 96 ntBASIC-2.86□□□□□ -2.87
NKX6-2Q9C056 RNU7-160P-201ENST00000516660 62 ntBASIC-2.86□□□□□ -2.87
NKX6-2Q9C056 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.87□□□□□ -2.87
NKX6-2Q9C056 RNU6-834P-201ENST00000362367 110 ntBASIC-2.88□□□□□ -2.87
NKX6-2Q9C056 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.88□□□□□ -2.87
NKX6-2Q9C056 AC090425.1-201ENST00000610007 140 ntBASIC-2.88□□□□□ -2.87
NKX6-2Q9C056 RNU6-70P-201ENST00000516438 60 ntBASIC-2.89□□□□□ -2.87
NKX6-2Q9C056 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.89□□□□□ -2.87
NKX6-2Q9C056 RNU6-92P-201ENST00000605893 104 ntBASIC-2.89□□□□□ -2.87
NKX6-2Q9C056 RNY4P7-201ENST00000364600 96 ntBASIC-2.9□□□□□ -2.87
NKX6-2Q9C056 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.9□□□□□ -2.87
NKX6-2Q9C056 MIR7110-201ENST00000612638 86 ntBASIC-2.9□□□□□ -2.87
NKX6-2Q9C056 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.91□□□□□ -2.88
NKX6-2Q9C056 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.91□□□□□ -2.88
NKX6-2Q9C056 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.92□□□□□ -2.88
NKX6-2Q9C056 RNU6-810P-201ENST00000364001 107 ntBASIC-2.92□□□□□ -2.88
NKX6-2Q9C056 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.92□□□□□ -2.88
NKX6-2Q9C056 MIR548N-201ENST00000408742 75 ntBASIC-2.92□□□□□ -2.88
NKX6-2Q9C056 RNU6-542P-201ENST00000516405 103 ntBASIC-2.92□□□□□ -2.88
NKX6-2Q9C056 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.93□□□□□ -2.88
NKX6-2Q9C056 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.93□□□□□ -2.88
NKX6-2Q9C056 MIR548AI-201ENST00000579940 88 ntBASIC-2.94□□□□□ -2.88
NKX6-2Q9C056 SNORD60.1-201ENST00000362451 73 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 RNU6-640P-201ENST00000363693 105 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 SNORD113-3-201ENST00000364830 72 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 SNORD116.2-201ENST00000391251 93 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 SNORA17.4-201ENST00000391287 132 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 RNU6-231P-201ENST00000517122 103 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 AC099654.10-201ENST00000640395 161 ntBASIC-2.95□□□□□ -2.88
NKX6-2Q9C056 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.96□□□□□ -2.88
NKX6-2Q9C056 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.97□□□□□ -2.88
NKX6-2Q9C056 MIR5588-201ENST00000581890 63 ntBASIC-2.98□□□□□ -2.89
NKX6-2Q9C056 MIR4712-201ENST00000583750 82 ntBASIC-2.98□□□□□ -2.89
NKX6-2Q9C056 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.98□□□□□ -2.89
NKX6-2Q9C056 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.99□□□□□ -2.89
NKX6-2Q9C056 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.99□□□□□ -2.89
NKX6-2Q9C056 IGLL4P-201ENST00000614590 133 ntBASIC-2.99□□□□□ -2.89
NKX6-2Q9C056 RNU6-1079P-201ENST00000362861 110 ntBASIC-3□□□□□ -2.89
NKX6-2Q9C056 RNU6-81P-201ENST00000365608 104 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-32P-201ENST00000383948 107 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-209P-201ENST00000384118 107 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-13P-201ENST00000384248 107 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-12P-201ENST00000384604 107 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-41P-201ENST00000384741 107 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-530P-201ENST00000391180 107 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.01□□□□□ -2.89
NKX6-2Q9C056 RNU6-361P-201ENST00000364454 107 ntBASIC-3.02□□□□□ -2.89
NKX6-2Q9C056 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.02□□□□□ -2.89
NKX6-2Q9C056 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.04□□□□□ -2.9
NKX6-2Q9C056 RNU6-22P-201ENST00000384355 107 ntBASIC-3.04□□□□□ -2.9
NKX6-2Q9C056 SNORA40B-201ENST00000385573 128 ntBASIC-3.04□□□□□ -2.9
NKX6-2Q9C056 MIR5693-201ENST00000577722 73 ntBASIC-3.04□□□□□ -2.9
NKX6-2Q9C056 RNU6-979P-201ENST00000383896 107 ntBASIC-3.05□□□□□ -2.9
NKX6-2Q9C056 MIR3134-201ENST00000579433 74 ntBASIC-3.05□□□□□ -2.9
NKX6-2Q9C056 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.05□□□□□ -2.9
NKX6-2Q9C056 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.06□□□□□ -2.9
NKX6-2Q9C056 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.06□□□□□ -2.9
NKX6-2Q9C056 MIR1245B-201ENST00000636115 69 ntBASIC-3.06□□□□□ -2.9
NKX6-2Q9C056 MIR4426-201ENST00000640330 63 ntBASIC-3.06□□□□□ -2.9
NKX6-2Q9C056 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.07□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms