Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 RNU6-598P-201ENST00000364017 105 ntBASIC-1.36□□□□□ -2.63
TRIM9Q9C026 SNORD113-2-201ENST00000391082 72 ntBASIC-1.36□□□□□ -2.63
TRIM9Q9C026 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.36□□□□□ -2.63
TRIM9Q9C026 RNU6-294P-201ENST00000364999 102 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 RNU6-242P-201ENST00000384359 107 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 MIR450A2-201ENST00000385022 100 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 RNU6-70P-201ENST00000516438 60 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.37□□□□□ -2.63
TRIM9Q9C026 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.38□□□□□ -2.63
TRIM9Q9C026 RNU6-630P-201ENST00000391258 106 ntBASIC-1.38□□□□□ -2.63
TRIM9Q9C026 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.38□□□□□ -2.63
TRIM9Q9C026 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.38□□□□□ -2.63
TRIM9Q9C026 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 RNA5SP173-201ENST00000364857 136 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 U2.18-201ENST00000622185 84 ntBASIC-1.39□□□□□ -2.63
TRIM9Q9C026 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.4□□□□□ -2.63
TRIM9Q9C026 MIR154-201ENST00000385243 84 ntBASIC-1.4□□□□□ -2.63
TRIM9Q9C026 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.4□□□□□ -2.63
TRIM9Q9C026 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.41□□□□□ -2.64
TRIM9Q9C026 AC018880.2-201ENST00000414265 201 ntBASIC-1.41□□□□□ -2.64
TRIM9Q9C026 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 SNORD116-16-201ENST00000384533 92 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 MIR5582-201ENST00000579697 68 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.42□□□□□ -2.64
TRIM9Q9C026 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.43□□□□□ -2.64
TRIM9Q9C026 RNU6-608P-201ENST00000383927 104 ntBASIC-1.43□□□□□ -2.64
TRIM9Q9C026 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.43□□□□□ -2.64
TRIM9Q9C026 RNU6-79P-201ENST00000362511 107 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 RNU6-895P-201ENST00000384125 103 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 MIR4666B-201ENST00000578142 81 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.44□□□□□ -2.64
TRIM9Q9C026 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 MIR548AA1-201ENST00000384971 97 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 RNU6-400P-201ENST00000391173 106 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 MIR3134-201ENST00000579433 74 ntBASIC-1.45□□□□□ -2.64
TRIM9Q9C026 SNORA41B-201ENST00000384785 128 ntBASIC-1.46□□□□□ -2.64
TRIM9Q9C026 RNU6-194P-201ENST00000363862 105 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 SNORD115-31-201ENST00000365318 82 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 SNORD116-24-201ENST00000384549 92 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 RNU6-803P-201ENST00000516034 102 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.47□□□□□ -2.64
TRIM9Q9C026 MIR3170-201ENST00000582699 77 ntBASIC-1.47□□□□□ -2.64
TRIM9Q9C026 RNU6-787P-201ENST00000384032 107 ntBASIC-1.48□□□□□ -2.65
TRIM9Q9C026 RNU6-247P-201ENST00000362636 107 ntBASIC-1.49□□□□□ -2.65
TRIM9Q9C026 SNORD1B-201ENST00000363091 84 ntBASIC-1.49□□□□□ -2.65
TRIM9Q9C026 MIR23C-201ENST00000579846 100 ntBASIC-1.49□□□□□ -2.65
TRIM9Q9C026 RNU6-820P-201ENST00000384273 107 ntBASIC-1.5□□□□□ -2.65
TRIM9Q9C026 AC062037.1-201ENST00000605302 128 ntBASIC-1.5□□□□□ -2.65
TRIM9Q9C026 RNU6-995P-201ENST00000391244 107 ntBASIC-1.51□□□□□ -2.65
TRIM9Q9C026 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
TRIM9Q9C026 RNU6-687P-201ENST00000516443 89 ntBASIC-1.52□□□□□ -2.65
TRIM9Q9C026 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.53□□□□□ -2.65
TRIM9Q9C026 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.53□□□□□ -2.65
TRIM9Q9C026 RNU6-230P-201ENST00000362457 104 ntBASIC-1.54□□□□□ -2.66
TRIM9Q9C026 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
TRIM9Q9C026 RNU7-151P-201ENST00000516930 53 ntBASIC-1.54□□□□□ -2.66
TRIM9Q9C026 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.55□□□□□ -2.66
TRIM9Q9C026 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.55□□□□□ -2.66
TRIM9Q9C026 RNU6-695P-201ENST00000391157 104 ntBASIC-1.56□□□□□ -2.66
TRIM9Q9C026 RNU6-172P-201ENST00000411000 93 ntBASIC-1.56□□□□□ -2.66
TRIM9Q9C026 RNU6-563P-201ENST00000364872 108 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 RNU6-411P-201ENST00000384451 107 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 MIR579-201ENST00000385221 98 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 RNU6-542P-201ENST00000516405 103 ntBASIC-1.57□□□□□ -2.66
TRIM9Q9C026 AC120024.2-201ENST00000576526 175 ntBASIC-1.58□□□□□ -2.66
TRIM9Q9C026 U7.4-201ENST00000614961 63 ntBASIC-1.58□□□□□ -2.66
TRIM9Q9C026 RNU6-258P-201ENST00000390884 101 ntBASIC-1.59□□□□□ -2.66
TRIM9Q9C026 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.59□□□□□ -2.66
TRIM9Q9C026 SNORD63.2-201ENST00000516303 64 ntBASIC-1.6□□□□□ -2.67
TRIM9Q9C026 RNU6-92P-201ENST00000605893 104 ntBASIC-1.6□□□□□ -2.67
TRIM9Q9C026 RNA5SP170-201ENST00000517150 101 ntBASIC-1.61□□□□□ -2.67
TRIM9Q9C026 MIR7978-201ENST00000636158 59 ntBASIC-1.61□□□□□ -2.67
TRIM9Q9C026 RNU6-669P-201ENST00000365575 107 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
TRIM9Q9C026 MIR3123-201ENST00000583417 75 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.62□□□□□ -2.67
TRIM9Q9C026 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 SNORA27.2-201ENST00000363365 126 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 SNORD73B-201ENST00000364394 72 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.63□□□□□ -2.67
TRIM9Q9C026 RNU4-88P-201ENST00000411220 86 ntBASIC-1.64□□□□□ -2.67
TRIM9Q9C026 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.64□□□□□ -2.67
TRIM9Q9C026 RNU6-841P-201ENST00000383872 107 ntBASIC-1.65□□□□□ -2.67
TRIM9Q9C026 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.66□□□□□ -2.68
TRIM9Q9C026 RNU6-634P-201ENST00000459134 106 ntBASIC-1.66□□□□□ -2.68
TRIM9Q9C026 MIR548AM-201ENST00000584298 74 ntBASIC-1.66□□□□□ -2.68
TRIM9Q9C026 SNORD60.1-201ENST00000362451 73 ntBASIC-1.67□□□□□ -2.68
TRIM9Q9C026 RNU6-573P-201ENST00000383938 106 ntBASIC-1.67□□□□□ -2.68
TRIM9Q9C026 MIR125B1-201ENST00000385236 88 ntBASIC-1.67□□□□□ -2.68
TRIM9Q9C026 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms