Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-258P-201ENST00000390884 101 ntBASIC-0.37□□□□□ -2.47
ZKSCAN3Q9BRR0 RNU6-930P-201ENST00000390938 100 ntBASIC-0.37□□□□□ -2.47
ZKSCAN3Q9BRR0 AP001180.6-201ENST00000584918 159 ntBASIC-0.37□□□□□ -2.47
ZKSCAN3Q9BRR0 MIR8064-201ENST00000612863 90 ntBASIC-0.37□□□□□ -2.47
ZKSCAN3Q9BRR0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
ZKSCAN3Q9BRR0 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
ZKSCAN3Q9BRR0 RNU6-608P-201ENST00000383927 104 ntBASIC-0.41□□□□□ -2.48
ZKSCAN3Q9BRR0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.41□□□□□ -2.48
ZKSCAN3Q9BRR0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.41□□□□□ -2.48
ZKSCAN3Q9BRR0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.42□□□□□ -2.48
ZKSCAN3Q9BRR0 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.42□□□□□ -2.48
ZKSCAN3Q9BRR0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
ZKSCAN3Q9BRR0 RNA5SP368-201ENST00000364298 116 ntBASIC-0.43□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR29B1-201ENST00000385015 81 ntBASIC-0.43□□□□□ -2.48
ZKSCAN3Q9BRR0 RNU6-530P-201ENST00000391180 107 ntBASIC-0.43□□□□□ -2.48
ZKSCAN3Q9BRR0 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
ZKSCAN3Q9BRR0 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.44□□□□□ -2.48
ZKSCAN3Q9BRR0 Z95118.1-201ENST00000421372 247 ntBASIC-0.44□□□□□ -2.48
ZKSCAN3Q9BRR0 RNU6-758P-201ENST00000516292 89 ntBASIC-0.44□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR4493-201ENST00000584016 73 ntBASIC-0.44□□□□□ -2.48
ZKSCAN3Q9BRR0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR101-1-201ENST00000362265 75 ntBASIC-0.46□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR507-201ENST00000385234 94 ntBASIC-0.46□□□□□ -2.48
ZKSCAN3Q9BRR0 SNORA3B-201ENST00000391305 131 ntBASIC-0.46□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR548F3-201ENST00000408509 87 ntBASIC-0.46□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR548AL-201ENST00000578416 97 ntBASIC-0.46□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR6086-201ENST00000638065 55 ntBASIC-0.47□□□□□ -2.48
ZKSCAN3Q9BRR0 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
ZKSCAN3Q9BRR0 RNU6-284P-201ENST00000411105 106 ntBASIC-0.48□□□□□ -2.49
ZKSCAN3Q9BRR0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.49□□□□□ -2.49
ZKSCAN3Q9BRR0 RPL35AP4-201ENST00000412007 102 ntBASIC-0.53□□□□□ -2.49
ZKSCAN3Q9BRR0 MIR23C-201ENST00000579846 100 ntBASIC-0.53□□□□□ -2.49
ZKSCAN3Q9BRR0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
ZKSCAN3Q9BRR0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.54□□□□□ -2.5
ZKSCAN3Q9BRR0 MIR224-201ENST00000384889 81 ntBASIC-0.54□□□□□ -2.5
ZKSCAN3Q9BRR0 RPS29P8-201ENST00000445109 171 ntBASIC-0.55□□□□□ -2.5
ZKSCAN3Q9BRR0 MIR147A-201ENST00000385079 72 ntBASIC-0.56□□□□□ -2.5
ZKSCAN3Q9BRR0 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.56□□□□□ -2.5
ZKSCAN3Q9BRR0 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.57□□□□□ -2.5
ZKSCAN3Q9BRR0 RNU6-30P-201ENST00000384561 107 ntBASIC-0.57□□□□□ -2.5
ZKSCAN3Q9BRR0 RNA5SP25-201ENST00000410815 110 ntBASIC-0.57□□□□□ -2.5
ZKSCAN3Q9BRR0 RNU6-742P-201ENST00000365289 107 ntBASIC-0.58□□□□□ -2.5
ZKSCAN3Q9BRR0 RNA5SP476-201ENST00000516613 103 ntBASIC-0.58□□□□□ -2.5
ZKSCAN3Q9BRR0 RNU6-361P-201ENST00000364454 107 ntBASIC-0.59□□□□□ -2.5
ZKSCAN3Q9BRR0 snoU13.19-201ENST00000459148 104 ntBASIC-0.59□□□□□ -2.5
ZKSCAN3Q9BRR0 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
ZKSCAN3Q9BRR0 MIR4426-201ENST00000640330 63 ntBASIC-0.59□□□□□ -2.5
ZKSCAN3Q9BRR0 RNY3P8-201ENST00000411366 126 ntBASIC-0.6□□□□□ -2.51
ZKSCAN3Q9BRR0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.6□□□□□ -2.51
ZKSCAN3Q9BRR0 SNORD114-15-201ENST00000364687 72 ntBASIC-0.61□□□□□ -2.51
ZKSCAN3Q9BRR0 RNU6-431P-201ENST00000383874 107 ntBASIC-0.62□□□□□ -2.51
ZKSCAN3Q9BRR0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.62□□□□□ -2.51
ZKSCAN3Q9BRR0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.62□□□□□ -2.51
ZKSCAN3Q9BRR0 MIR202-201ENST00000362219 110 ntBASIC-0.63□□□□□ -2.51
ZKSCAN3Q9BRR0 RNA5SP26-201ENST00000362406 119 ntBASIC-0.63□□□□□ -2.51
ZKSCAN3Q9BRR0 MIR545-201ENST00000385085 106 ntBASIC-0.63□□□□□ -2.51
ZKSCAN3Q9BRR0 AC090616.4-201ENST00000448026 115 ntBASIC-0.63□□□□□ -2.51
ZKSCAN3Q9BRR0 RNY1P9-201ENST00000532431 109 ntBASIC-0.63□□□□□ -2.51
ZKSCAN3Q9BRR0 SNORD95.1-201ENST00000364099 68 ntBASIC-0.64□□□□□ -2.51
ZKSCAN3Q9BRR0 SNORD64-201ENST00000386683 67 ntBASIC-0.64□□□□□ -2.51
ZKSCAN3Q9BRR0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
ZKSCAN3Q9BRR0 SNORA17.4-201ENST00000391287 132 ntBASIC-0.65□□□□□ -2.51
ZKSCAN3Q9BRR0 HAR1A.1-201ENST00000459583 118 ntBASIC-0.65□□□□□ -2.51
ZKSCAN3Q9BRR0 MIR3681-201ENST00000580089 72 ntBASIC-0.66□□□□□ -2.52
ZKSCAN3Q9BRR0 SNORD60-201ENST00000383903 83 ntBASIC-0.67□□□□□ -2.52
ZKSCAN3Q9BRR0 RNA5SP67-201ENST00000516422 131 ntBASIC-0.69□□□□□ -2.52
ZKSCAN3Q9BRR0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
ZKSCAN3Q9BRR0 RNU6-300P-201ENST00000459080 104 ntBASIC-0.7□□□□□ -2.52
ZKSCAN3Q9BRR0 RNU6-176P-201ENST00000517196 105 ntBASIC-0.7□□□□□ -2.52
ZKSCAN3Q9BRR0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.71□□□□□ -2.52
ZKSCAN3Q9BRR0 MIR6818-201ENST00000621576 65 ntBASIC-0.72□□□□□ -2.52
ZKSCAN3Q9BRR0 MIR382-201ENST00000637119 76 ntBASIC-0.72□□□□□ -2.52
ZKSCAN3Q9BRR0 RNU6-986P-201ENST00000363133 102 ntBASIC-0.73□□□□□ -2.53
ZKSCAN3Q9BRR0 MIR4317-201ENST00000637586 65 ntBASIC-0.73□□□□□ -2.53
ZKSCAN3Q9BRR0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.74□□□□□ -2.53
ZKSCAN3Q9BRR0 MT-TQ-201ENST00000387372 72 ntBASIC-0.74□□□□□ -2.53
ZKSCAN3Q9BRR0 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.76□□□□□ -2.53
ZKSCAN3Q9BRR0 MIR548H4-201ENST00000408689 111 ntBASIC-0.76□□□□□ -2.53
ZKSCAN3Q9BRR0 AC120024.2-201ENST00000576526 175 ntBASIC-0.76□□□□□ -2.53
ZKSCAN3Q9BRR0 MIR548N-201ENST00000408742 75 ntBASIC-0.77□□□□□ -2.53
ZKSCAN3Q9BRR0 RNU6-822P-201ENST00000362707 106 ntBASIC-0.78□□□□□ -2.53
ZKSCAN3Q9BRR0 AC018880.2-201ENST00000414265 201 ntBASIC-0.78□□□□□ -2.53
ZKSCAN3Q9BRR0 MIR548AX-201ENST00000580117 73 ntBASIC-0.79□□□□□ -2.54
ZKSCAN3Q9BRR0 AC013734.1-201ENST00000619329 111 ntBASIC-0.79□□□□□ -2.54
ZKSCAN3Q9BRR0 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.79□□□□□ -2.54
ZKSCAN3Q9BRR0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.81□□□□□ -2.54
ZKSCAN3Q9BRR0 RNU6-164P-201ENST00000364604 103 ntBASIC-0.82□□□□□ -2.54
ZKSCAN3Q9BRR0 RNU6-563P-201ENST00000364872 108 ntBASIC-0.83□□□□□ -2.54
ZKSCAN3Q9BRR0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.83□□□□□ -2.54
ZKSCAN3Q9BRR0 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.86□□□□□ -2.55
ZKSCAN3Q9BRR0 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.86□□□□□ -2.55
ZKSCAN3Q9BRR0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.86□□□□□ -2.55
ZKSCAN3Q9BRR0 MIR196A1-201ENST00000388006 70 ntBASIC-0.87□□□□□ -2.55
ZKSCAN3Q9BRR0 U6.97-201ENST00000636904 101 ntBASIC-0.88□□□□□ -2.55
ZKSCAN3Q9BRR0 RNU6-576P-201ENST00000390854 102 ntBASIC-0.89□□□□□ -2.55
ZKSCAN3Q9BRR0 MIR409-201ENST00000362237 79 ntBASIC-0.91□□□□□ -2.56
ZKSCAN3Q9BRR0 RNU6-79P-201ENST00000362511 107 ntBASIC-0.91□□□□□ -2.56
ZKSCAN3Q9BRR0 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.91□□□□□ -2.56
ZKSCAN3Q9BRR0 RNU6-59P-201ENST00000384787 107 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms