Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-696P-201ENST00000390834 107 ntBASIC-1.52□□□□□ -2.65
CCDC138Q96M89 RNU6-573P-201ENST00000383938 106 ntBASIC-1.55□□□□□ -2.66
CCDC138Q96M89 SNORD19-201ENST00000391191 68 ntBASIC-1.55□□□□□ -2.66
CCDC138Q96M89 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.56□□□□□ -2.66
CCDC138Q96M89 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.57□□□□□ -2.66
CCDC138Q96M89 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.57□□□□□ -2.66
CCDC138Q96M89 MIR3139-201ENST00000579145 76 ntBASIC-1.57□□□□□ -2.66
CCDC138Q96M89 MIR4490-201ENST00000582647 84 ntBASIC-1.57□□□□□ -2.66
CCDC138Q96M89 MIR5683-201ENST00000636514 76 ntBASIC-1.57□□□□□ -2.66
CCDC138Q96M89 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.58□□□□□ -2.66
CCDC138Q96M89 SNORD116-16-201ENST00000384533 92 ntBASIC-1.58□□□□□ -2.66
CCDC138Q96M89 MIR548Q-201ENST00000408404 100 ntBASIC-1.58□□□□□ -2.66
CCDC138Q96M89 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.58□□□□□ -2.66
CCDC138Q96M89 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.59□□□□□ -2.66
CCDC138Q96M89 MIR4520-1-201ENST00000582609 70 ntBASIC-1.6□□□□□ -2.67
CCDC138Q96M89 MIR29B1-201ENST00000385015 81 ntBASIC-1.61□□□□□ -2.67
CCDC138Q96M89 RNU6-542P-201ENST00000516405 103 ntBASIC-1.61□□□□□ -2.67
CCDC138Q96M89 RNU6-228P-201ENST00000362700 106 ntBASIC-1.62□□□□□ -2.67
CCDC138Q96M89 RNU6-598P-201ENST00000364017 105 ntBASIC-1.62□□□□□ -2.67
CCDC138Q96M89 MIR1255A-201ENST00000408338 113 ntBASIC-1.62□□□□□ -2.67
CCDC138Q96M89 MIR1302-4-201ENST00000408701 150 ntBASIC-1.62□□□□□ -2.67
CCDC138Q96M89 MIR507-201ENST00000385234 94 ntBASIC-1.63□□□□□ -2.67
CCDC138Q96M89 MT-TM-201ENST00000387377 68 ntBASIC-1.63□□□□□ -2.67
CCDC138Q96M89 AP002795.1-201ENST00000534879 84 ntBASIC-1.63□□□□□ -2.67
CCDC138Q96M89 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.64□□□□□ -2.67
CCDC138Q96M89 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.64□□□□□ -2.67
CCDC138Q96M89 RNU6-279P-201ENST00000391297 101 ntBASIC-1.65□□□□□ -2.67
CCDC138Q96M89 RNU6-634P-201ENST00000459134 106 ntBASIC-1.65□□□□□ -2.67
CCDC138Q96M89 RNU6-857P-201ENST00000515893 110 ntBASIC-1.65□□□□□ -2.67
CCDC138Q96M89 SNORA41B-201ENST00000384785 128 ntBASIC-1.66□□□□□ -2.68
CCDC138Q96M89 RNA5SP86-201ENST00000390869 98 ntBASIC-1.67□□□□□ -2.68
CCDC138Q96M89 MIR6818-201ENST00000621576 65 ntBASIC-1.67□□□□□ -2.68
CCDC138Q96M89 SNORD78.1-201ENST00000390866 65 ntBASIC-1.69□□□□□ -2.68
CCDC138Q96M89 MIR889-201ENST00000401280 79 ntBASIC-1.69□□□□□ -2.68
CCDC138Q96M89 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.69□□□□□ -2.68
CCDC138Q96M89 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.7□□□□□ -2.68
CCDC138Q96M89 RNU6-663P-201ENST00000391105 106 ntBASIC-1.7□□□□□ -2.68
CCDC138Q96M89 U2.18-201ENST00000622185 84 ntBASIC-1.7□□□□□ -2.68
CCDC138Q96M89 RNA5SP26-201ENST00000362406 119 ntBASIC-1.71□□□□□ -2.68
CCDC138Q96M89 MIR548AA1-201ENST00000384971 97 ntBASIC-1.72□□□□□ -2.68
CCDC138Q96M89 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.73□□□□□ -2.69
CCDC138Q96M89 RNU6-871P-201ENST00000516122 100 ntBASIC-1.73□□□□□ -2.69
CCDC138Q96M89 RNU6-92P-201ENST00000605893 104 ntBASIC-1.73□□□□□ -2.69
CCDC138Q96M89 RNU6-576P-201ENST00000390854 102 ntBASIC-1.75□□□□□ -2.69
CCDC138Q96M89 RNU6-630P-201ENST00000391258 106 ntBASIC-1.75□□□□□ -2.69
CCDC138Q96M89 MIR6502-201ENST00000617296 76 ntBASIC-1.75□□□□□ -2.69
CCDC138Q96M89 SNORD1B-201ENST00000363091 84 ntBASIC-1.76□□□□□ -2.69
CCDC138Q96M89 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.76□□□□□ -2.69
CCDC138Q96M89 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.76□□□□□ -2.69
CCDC138Q96M89 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.77□□□□□ -2.69
CCDC138Q96M89 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
CCDC138Q96M89 RNU6-523P-201ENST00000516304 54 ntBASIC-1.77□□□□□ -2.69
CCDC138Q96M89 MIR6874-201ENST00000635894 71 ntBASIC-1.77□□□□□ -2.69
CCDC138Q96M89 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.78□□□□□ -2.69
CCDC138Q96M89 MIR4679-1-201ENST00000637619 75 ntBASIC-1.78□□□□□ -2.69
CCDC138Q96M89 SNORD30.1-201ENST00000391309 70 ntBASIC-1.79□□□□□ -2.7
CCDC138Q96M89 MIR548H1-201ENST00000408610 102 ntBASIC-1.79□□□□□ -2.7
CCDC138Q96M89 RPL35AP4-201ENST00000412007 102 ntBASIC-1.79□□□□□ -2.7
CCDC138Q96M89 MIR4756-201ENST00000577874 78 ntBASIC-1.79□□□□□ -2.7
CCDC138Q96M89 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.79□□□□□ -2.7
CCDC138Q96M89 MIR664B-201ENST00000626756 61 ntBASIC-1.8□□□□□ -2.7
CCDC138Q96M89 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.81□□□□□ -2.7
CCDC138Q96M89 RNU6-995P-201ENST00000391244 107 ntBASIC-1.81□□□□□ -2.7
CCDC138Q96M89 AC108019.1-201ENST00000512540 175 ntBASIC-1.81□□□□□ -2.7
CCDC138Q96M89 SNORA25.4-201ENST00000363666 124 ntBASIC-1.82□□□□□ -2.7
CCDC138Q96M89 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.82□□□□□ -2.7
CCDC138Q96M89 RNA5SP225-201ENST00000410874 135 ntBASIC-1.82□□□□□ -2.7
CCDC138Q96M89 RNU6-164P-201ENST00000364604 103 ntBASIC-1.83□□□□□ -2.7
CCDC138Q96M89 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.83□□□□□ -2.7
CCDC138Q96M89 AC090616.4-201ENST00000448026 115 ntBASIC-1.84□□□□□ -2.7
CCDC138Q96M89 MIR3170-201ENST00000582699 77 ntBASIC-1.85□□□□□ -2.71
CCDC138Q96M89 RNU6-649P-201ENST00000384463 107 ntBASIC-1.86□□□□□ -2.71
CCDC138Q96M89 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.86□□□□□ -2.71
CCDC138Q96M89 RNU6-172P-201ENST00000411000 93 ntBASIC-1.86□□□□□ -2.71
CCDC138Q96M89 SNORD60.1-201ENST00000362451 73 ntBASIC-1.87□□□□□ -2.71
CCDC138Q96M89 MIR520D-201ENST00000385002 87 ntBASIC-1.87□□□□□ -2.71
CCDC138Q96M89 MIR487B-201ENST00000385021 84 ntBASIC-1.87□□□□□ -2.71
CCDC138Q96M89 MIR4662A-201ENST00000637499 67 ntBASIC-1.87□□□□□ -2.71
CCDC138Q96M89 RNA5SP405-201ENST00000363059 114 ntBASIC-1.88□□□□□ -2.71
CCDC138Q96M89 RNU6-608P-201ENST00000383927 104 ntBASIC-1.88□□□□□ -2.71
CCDC138Q96M89 RNU7-151P-201ENST00000516930 53 ntBASIC-1.88□□□□□ -2.71
CCDC138Q96M89 RNU6-539P-201ENST00000516665 103 ntBASIC-1.89□□□□□ -2.71
CCDC138Q96M89 RNU6-247P-201ENST00000362636 107 ntBASIC-1.9□□□□□ -2.71
CCDC138Q96M89 RNU6-803P-201ENST00000516034 102 ntBASIC-1.91□□□□□ -2.72
CCDC138Q96M89 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.91□□□□□ -2.72
CCDC138Q96M89 MIR23C-201ENST00000579846 100 ntBASIC-1.91□□□□□ -2.72
CCDC138Q96M89 U6.111-201ENST00000636093 83 ntBASIC-1.91□□□□□ -2.72
CCDC138Q96M89 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.92□□□□□ -2.72
CCDC138Q96M89 SNORA25.5-201ENST00000363782 126 ntBASIC-1.93□□□□□ -2.72
CCDC138Q96M89 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.93□□□□□ -2.72
CCDC138Q96M89 AC005520.4-201ENST00000604337 90 ntBASIC-1.93□□□□□ -2.72
CCDC138Q96M89 RNU6-776P-201ENST00000364403 104 ntBASIC-1.95□□□□□ -2.72
CCDC138Q96M89 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.95□□□□□ -2.72
CCDC138Q96M89 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.95□□□□□ -2.72
CCDC138Q96M89 MIR579-201ENST00000385221 98 ntBASIC-1.95□□□□□ -2.72
CCDC138Q96M89 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.95□□□□□ -2.72
CCDC138Q96M89 AC018880.2-201ENST00000414265 201 ntBASIC-1.96□□□□□ -2.72
CCDC138Q96M89 MIR7978-201ENST00000636158 59 ntBASIC-1.96□□□□□ -2.72
CCDC138Q96M89 AC103706.3-201ENST00000636297 85 ntBASIC-1.97□□□□□ -2.72
CCDC138Q96M89 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms