Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.39□□□□□ -2.63
PPP4R4Q6NUP7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.4□□□□□ -2.63
PPP4R4Q6NUP7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.4□□□□□ -2.63
PPP4R4Q6NUP7 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.4□□□□□ -2.63
PPP4R4Q6NUP7 AC090616.4-201ENST00000448026 115 ntBASIC-1.4□□□□□ -2.63
PPP4R4Q6NUP7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.41□□□□□ -2.64
PPP4R4Q6NUP7 MIR365A-201ENST00000362260 87 ntBASIC-1.42□□□□□ -2.64
PPP4R4Q6NUP7 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.42□□□□□ -2.64
PPP4R4Q6NUP7 MIR548H1-201ENST00000408610 102 ntBASIC-1.42□□□□□ -2.64
PPP4R4Q6NUP7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.43□□□□□ -2.64
PPP4R4Q6NUP7 RPL35AP4-201ENST00000412007 102 ntBASIC-1.43□□□□□ -2.64
PPP4R4Q6NUP7 RNU6-542P-201ENST00000516405 103 ntBASIC-1.43□□□□□ -2.64
PPP4R4Q6NUP7 RNU6-608P-201ENST00000383927 104 ntBASIC-1.44□□□□□ -2.64
PPP4R4Q6NUP7 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.44□□□□□ -2.64
PPP4R4Q6NUP7 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
PPP4R4Q6NUP7 MIR1207-201ENST00000408249 87 ntBASIC-1.44□□□□□ -2.64
PPP4R4Q6NUP7 MIR548Q-201ENST00000408404 100 ntBASIC-1.44□□□□□ -2.64
PPP4R4Q6NUP7 U2.18-201ENST00000622185 84 ntBASIC-1.44□□□□□ -2.64
PPP4R4Q6NUP7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.45□□□□□ -2.64
PPP4R4Q6NUP7 SNORD114-3-201ENST00000364969 75 ntBASIC-1.45□□□□□ -2.64
PPP4R4Q6NUP7 RNU6-663P-201ENST00000391105 106 ntBASIC-1.45□□□□□ -2.64
PPP4R4Q6NUP7 RNU6-630P-201ENST00000391258 106 ntBASIC-1.45□□□□□ -2.64
PPP4R4Q6NUP7 MIR487B-201ENST00000385021 84 ntBASIC-1.46□□□□□ -2.64
PPP4R4Q6NUP7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.47□□□□□ -2.64
PPP4R4Q6NUP7 RNU6-983P-201ENST00000516004 103 ntBASIC-1.48□□□□□ -2.65
PPP4R4Q6NUP7 MIR4441-201ENST00000582623 100 ntBASIC-1.48□□□□□ -2.65
PPP4R4Q6NUP7 SNORD1B-201ENST00000363091 84 ntBASIC-1.49□□□□□ -2.65
PPP4R4Q6NUP7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
PPP4R4Q6NUP7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.5□□□□□ -2.65
PPP4R4Q6NUP7 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.51□□□□□ -2.65
PPP4R4Q6NUP7 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.52□□□□□ -2.65
PPP4R4Q6NUP7 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.52□□□□□ -2.65
PPP4R4Q6NUP7 MIR3170-201ENST00000582699 77 ntBASIC-1.52□□□□□ -2.65
PPP4R4Q6NUP7 RNU6-92P-201ENST00000605893 104 ntBASIC-1.52□□□□□ -2.65
PPP4R4Q6NUP7 RNU6-79P-201ENST00000362511 107 ntBASIC-1.53□□□□□ -2.65
PPP4R4Q6NUP7 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.53□□□□□ -2.65
PPP4R4Q6NUP7 MIR548AA1-201ENST00000384971 97 ntBASIC-1.54□□□□□ -2.66
PPP4R4Q6NUP7 RNU6-871P-201ENST00000516122 100 ntBASIC-1.54□□□□□ -2.66
PPP4R4Q6NUP7 SNORD30.1-201ENST00000391309 70 ntBASIC-1.55□□□□□ -2.66
PPP4R4Q6NUP7 AC108019.1-201ENST00000512540 175 ntBASIC-1.55□□□□□ -2.66
PPP4R4Q6NUP7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.55□□□□□ -2.66
PPP4R4Q6NUP7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.56□□□□□ -2.66
PPP4R4Q6NUP7 SNORA25.4-201ENST00000363666 124 ntBASIC-1.56□□□□□ -2.66
PPP4R4Q6NUP7 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.56□□□□□ -2.66
PPP4R4Q6NUP7 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.57□□□□□ -2.66
PPP4R4Q6NUP7 RNU6-400P-201ENST00000391173 106 ntBASIC-1.57□□□□□ -2.66
PPP4R4Q6NUP7 AC018880.2-201ENST00000414265 201 ntBASIC-1.57□□□□□ -2.66
PPP4R4Q6NUP7 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.57□□□□□ -2.66
PPP4R4Q6NUP7 RNU6-776P-201ENST00000364403 104 ntBASIC-1.58□□□□□ -2.66
PPP4R4Q6NUP7 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.58□□□□□ -2.66
PPP4R4Q6NUP7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.58□□□□□ -2.66
PPP4R4Q6NUP7 RNU6-258P-201ENST00000390884 101 ntBASIC-1.58□□□□□ -2.66
PPP4R4Q6NUP7 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.58□□□□□ -2.66
PPP4R4Q6NUP7 MIR4756-201ENST00000577874 78 ntBASIC-1.58□□□□□ -2.66
PPP4R4Q6NUP7 SNORD60.1-201ENST00000362451 73 ntBASIC-1.59□□□□□ -2.66
PPP4R4Q6NUP7 AC005520.4-201ENST00000604337 90 ntBASIC-1.59□□□□□ -2.66
PPP4R4Q6NUP7 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.6□□□□□ -2.67
PPP4R4Q6NUP7 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.6□□□□□ -2.67
PPP4R4Q6NUP7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.6□□□□□ -2.67
PPP4R4Q6NUP7 U6.111-201ENST00000636093 83 ntBASIC-1.6□□□□□ -2.67
PPP4R4Q6NUP7 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.61□□□□□ -2.67
PPP4R4Q6NUP7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.61□□□□□ -2.67
PPP4R4Q6NUP7 MIR23C-201ENST00000579846 100 ntBASIC-1.61□□□□□ -2.67
PPP4R4Q6NUP7 RNU6-649P-201ENST00000384463 107 ntBASIC-1.62□□□□□ -2.67
PPP4R4Q6NUP7 RNU7-151P-201ENST00000516930 53 ntBASIC-1.62□□□□□ -2.67
PPP4R4Q6NUP7 MIR7978-201ENST00000636158 59 ntBASIC-1.62□□□□□ -2.67
PPP4R4Q6NUP7 RNU6-172P-201ENST00000411000 93 ntBASIC-1.63□□□□□ -2.67
PPP4R4Q6NUP7 RNU6-539P-201ENST00000516665 103 ntBASIC-1.63□□□□□ -2.67
PPP4R4Q6NUP7 MIR664B-201ENST00000626756 61 ntBASIC-1.63□□□□□ -2.67
PPP4R4Q6NUP7 MIR4662A-201ENST00000637499 67 ntBASIC-1.63□□□□□ -2.67
PPP4R4Q6NUP7 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.65□□□□□ -2.67
PPP4R4Q6NUP7 MIR125B1-201ENST00000385236 88 ntBASIC-1.65□□□□□ -2.67
PPP4R4Q6NUP7 RNY4P27-201ENST00000363341 96 ntBASIC-1.66□□□□□ -2.68
PPP4R4Q6NUP7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.67□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-695P-201ENST00000391157 104 ntBASIC-1.67□□□□□ -2.68
PPP4R4Q6NUP7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.67□□□□□ -2.68
PPP4R4Q6NUP7 SNORA25.5-201ENST00000363782 126 ntBASIC-1.68□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-669P-201ENST00000365575 107 ntBASIC-1.68□□□□□ -2.68
PPP4R4Q6NUP7 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
PPP4R4Q6NUP7 MIR4511-201ENST00000582784 87 ntBASIC-1.68□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
PPP4R4Q6NUP7 MIR579-201ENST00000385221 98 ntBASIC-1.69□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-980P-201ENST00000516925 103 ntBASIC-1.69□□□□□ -2.68
PPP4R4Q6NUP7 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.69□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-247P-201ENST00000362636 107 ntBASIC-1.7□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-995P-201ENST00000391244 107 ntBASIC-1.7□□□□□ -2.68
PPP4R4Q6NUP7 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.7□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-122P-201ENST00000516818 107 ntBASIC-1.7□□□□□ -2.68
PPP4R4Q6NUP7 SNORA27.2-201ENST00000363365 126 ntBASIC-1.71□□□□□ -2.68
PPP4R4Q6NUP7 MIR3123-201ENST00000583417 75 ntBASIC-1.71□□□□□ -2.68
PPP4R4Q6NUP7 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.72□□□□□ -2.68
PPP4R4Q6NUP7 SNORA72.7-201ENST00000516349 94 ntBASIC-1.72□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-118P-201ENST00000516552 102 ntBASIC-1.72□□□□□ -2.68
PPP4R4Q6NUP7 RNU6-841P-201ENST00000383872 107 ntBASIC-1.73□□□□□ -2.69
PPP4R4Q6NUP7 SNORD63.2-201ENST00000516303 64 ntBASIC-1.73□□□□□ -2.69
PPP4R4Q6NUP7 MIR548AM-201ENST00000584298 74 ntBASIC-1.73□□□□□ -2.69
PPP4R4Q6NUP7 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.73□□□□□ -2.69
PPP4R4Q6NUP7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
PPP4R4Q6NUP7 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.74□□□□□ -2.69
PPP4R4Q6NUP7 AC103706.3-201ENST00000636297 85 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms