Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU7-160P-201ENST00000516660 62 ntBASIC-2.31□□□□□ -2.78
ZNF404Q494X3 MIR466-201ENST00000580653 84 ntBASIC-2.31□□□□□ -2.78
ZNF404Q494X3 MIR548W-201ENST00000581970 74 ntBASIC-2.31□□□□□ -2.78
ZNF404Q494X3 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.32□□□□□ -2.78
ZNF404Q494X3 RNU6-789P-201ENST00000517105 102 ntBASIC-2.32□□□□□ -2.78
ZNF404Q494X3 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.33□□□□□ -2.78
ZNF404Q494X3 RNU6-974P-201ENST00000384099 108 ntBASIC-2.33□□□□□ -2.78
ZNF404Q494X3 RNU6-209P-201ENST00000384118 107 ntBASIC-2.33□□□□□ -2.78
ZNF404Q494X3 snoU13.10-201ENST00000459301 103 ntBASIC-2.33□□□□□ -2.78
ZNF404Q494X3 RNU6-640P-201ENST00000363693 105 ntBASIC-2.34□□□□□ -2.78
ZNF404Q494X3 SNORD115-31-201ENST00000365318 82 ntBASIC-2.34□□□□□ -2.78
ZNF404Q494X3 RNU6-895P-201ENST00000384125 103 ntBASIC-2.34□□□□□ -2.78
ZNF404Q494X3 RNU6-22P-201ENST00000384355 107 ntBASIC-2.34□□□□□ -2.78
ZNF404Q494X3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.34□□□□□ -2.78
ZNF404Q494X3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.34□□□□□ -2.78
ZNF404Q494X3 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.35□□□□□ -2.79
ZNF404Q494X3 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.35□□□□□ -2.79
ZNF404Q494X3 MIR154-201ENST00000385243 84 ntBASIC-2.35□□□□□ -2.79
ZNF404Q494X3 RNU6-542P-201ENST00000516405 103 ntBASIC-2.35□□□□□ -2.79
ZNF404Q494X3 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.35□□□□□ -2.79
ZNF404Q494X3 MIR4748-201ENST00000578076 82 ntBASIC-2.35□□□□□ -2.79
ZNF404Q494X3 RNU6-520P-201ENST00000384717 104 ntBASIC-2.36□□□□□ -2.79
ZNF404Q494X3 RNU6-92P-201ENST00000605893 104 ntBASIC-2.36□□□□□ -2.79
ZNF404Q494X3 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.37□□□□□ -2.79
ZNF404Q494X3 RNU6-70P-201ENST00000516438 60 ntBASIC-2.37□□□□□ -2.79
ZNF404Q494X3 RNY1P1-201ENST00000364372 112 ntBASIC-2.38□□□□□ -2.79
ZNF404Q494X3 RNU6-828P-201ENST00000364876 107 ntBASIC-2.38□□□□□ -2.79
ZNF404Q494X3 SNORD60-201ENST00000383903 83 ntBASIC-2.38□□□□□ -2.79
ZNF404Q494X3 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.38□□□□□ -2.79
ZNF404Q494X3 MIR548AI-201ENST00000579940 88 ntBASIC-2.38□□□□□ -2.79
ZNF404Q494X3 RNU6-32P-201ENST00000383948 107 ntBASIC-2.39□□□□□ -2.79
ZNF404Q494X3 RNU6-13P-201ENST00000384248 107 ntBASIC-2.39□□□□□ -2.79
ZNF404Q494X3 RNU6-12P-201ENST00000384604 107 ntBASIC-2.39□□□□□ -2.79
ZNF404Q494X3 RNU6-41P-201ENST00000384741 107 ntBASIC-2.39□□□□□ -2.79
ZNF404Q494X3 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.39□□□□□ -2.79
ZNF404Q494X3 MIR5588-201ENST00000581890 63 ntBASIC-2.39□□□□□ -2.79
ZNF404Q494X3 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.4□□□□□ -2.79
ZNF404Q494X3 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.4□□□□□ -2.79
ZNF404Q494X3 SNORD54-201ENST00000459159 67 ntBASIC-2.4□□□□□ -2.79
ZNF404Q494X3 MIR7110-201ENST00000612638 86 ntBASIC-2.4□□□□□ -2.79
ZNF404Q494X3 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.41□□□□□ -2.8
ZNF404Q494X3 RNU6-979P-201ENST00000383896 107 ntBASIC-2.41□□□□□ -2.8
ZNF404Q494X3 MIR581-201ENST00000384895 96 ntBASIC-2.41□□□□□ -2.8
ZNF404Q494X3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
ZNF404Q494X3 MIR548N-201ENST00000408742 75 ntBASIC-2.41□□□□□ -2.8
ZNF404Q494X3 IGLL4P-201ENST00000614590 133 ntBASIC-2.41□□□□□ -2.8
ZNF404Q494X3 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.42□□□□□ -2.8
ZNF404Q494X3 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.42□□□□□ -2.8
ZNF404Q494X3 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.42□□□□□ -2.8
ZNF404Q494X3 RNU6-313P-201ENST00000516317 112 ntBASIC-2.42□□□□□ -2.8
ZNF404Q494X3 MIR4712-201ENST00000583750 82 ntBASIC-2.42□□□□□ -2.8
ZNF404Q494X3 FTX_4.1-201ENST00000616291 147 ntBASIC-2.42□□□□□ -2.8
ZNF404Q494X3 SNORD60.1-201ENST00000362451 73 ntBASIC-2.43□□□□□ -2.8
ZNF404Q494X3 MIR202-201ENST00000362219 110 ntBASIC-2.44□□□□□ -2.8
ZNF404Q494X3 RNU6-649P-201ENST00000384463 107 ntBASIC-2.44□□□□□ -2.8
ZNF404Q494X3 AC097484.2-201ENST00000509147 251 ntBASIC-2.44□□□□□ -2.8
ZNF404Q494X3 MIR1245B-201ENST00000636115 69 ntBASIC-2.44□□□□□ -2.8
ZNF404Q494X3 RNA5SP93-201ENST00000362525 114 ntBASIC-2.45□□□□□ -2.8
ZNF404Q494X3 RNU6-361P-201ENST00000364454 107 ntBASIC-2.45□□□□□ -2.8
ZNF404Q494X3 RNU7-171P-201ENST00000459581 62 ntBASIC-2.45□□□□□ -2.8
ZNF404Q494X3 RNU6-231P-201ENST00000517122 103 ntBASIC-2.45□□□□□ -2.8
ZNF404Q494X3 RNU6-810P-201ENST00000364001 107 ntBASIC-2.46□□□□□ -2.8
ZNF404Q494X3 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.46□□□□□ -2.8
ZNF404Q494X3 SNORA17.4-201ENST00000391287 132 ntBASIC-2.46□□□□□ -2.8
ZNF404Q494X3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.47□□□□□ -2.8
ZNF404Q494X3 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.47□□□□□ -2.8
ZNF404Q494X3 RNU6-687P-201ENST00000516443 89 ntBASIC-2.47□□□□□ -2.8
ZNF404Q494X3 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.48□□□□□ -2.81
ZNF404Q494X3 RNU6-147P-201ENST00000383983 107 ntBASIC-2.49□□□□□ -2.81
ZNF404Q494X3 MIR3134-201ENST00000579433 74 ntBASIC-2.49□□□□□ -2.81
ZNF404Q494X3 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.5□□□□□ -2.81
ZNF404Q494X3 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.52□□□□□ -2.81
ZNF404Q494X3 RNY4P9-201ENST00000363194 97 ntBASIC-2.52□□□□□ -2.81
ZNF404Q494X3 SNORA40B-201ENST00000385573 128 ntBASIC-2.52□□□□□ -2.81
ZNF404Q494X3 SNORD116.2-201ENST00000391251 93 ntBASIC-2.52□□□□□ -2.81
ZNF404Q494X3 snosnR66.1-201ENST00000391095 99 ntBASIC-2.53□□□□□ -2.81
ZNF404Q494X3 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.54□□□□□ -2.82
ZNF404Q494X3 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.54□□□□□ -2.82
ZNF404Q494X3 RNU6-49P-201ENST00000384256 107 ntBASIC-2.54□□□□□ -2.82
ZNF404Q494X3 MIR379-201ENST00000362218 67 ntBASIC-2.55□□□□□ -2.82
ZNF404Q494X3 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.55□□□□□ -2.82
ZNF404Q494X3 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.55□□□□□ -2.82
ZNF404Q494X3 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.55□□□□□ -2.82
ZNF404Q494X3 SNORD45.2-201ENST00000363552 72 ntBASIC-2.56□□□□□ -2.82
ZNF404Q494X3 RNU6-530P-201ENST00000391180 107 ntBASIC-2.56□□□□□ -2.82
ZNF404Q494X3 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.57□□□□□ -2.82
ZNF404Q494X3 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.57□□□□□ -2.82
ZNF404Q494X3 RNU6-411P-201ENST00000384451 107 ntBASIC-2.57□□□□□ -2.82
ZNF404Q494X3 RNU6-122P-201ENST00000516818 107 ntBASIC-2.57□□□□□ -2.82
ZNF404Q494X3 MIR548M-201ENST00000408260 86 ntBASIC-2.58□□□□□ -2.82
ZNF404Q494X3 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.59□□□□□ -2.82
ZNF404Q494X3 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.59□□□□□ -2.82
ZNF404Q494X3 SNORA40.16-201ENST00000517238 121 ntBASIC-2.59□□□□□ -2.82
ZNF404Q494X3 SNORA25.5-201ENST00000363782 126 ntBASIC-2.6□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms