Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SNORD116-16-201ENST00000384533 92 ntBASIC-1.08□□□□□ -2.58
SRPXP78539 MIR496-201ENST00000385226 102 ntBASIC-1.08□□□□□ -2.58
SRPXP78539 RNU6-857P-201ENST00000515893 110 ntBASIC-1.09□□□□□ -2.58
SRPXP78539 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.09□□□□□ -2.58
SRPXP78539 MIR6818-201ENST00000621576 65 ntBASIC-1.09□□□□□ -2.58
SRPXP78539 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.11□□□□□ -2.59
SRPXP78539 MIR1207-201ENST00000408249 87 ntBASIC-1.11□□□□□ -2.59
SRPXP78539 RPL35AP4-201ENST00000412007 102 ntBASIC-1.11□□□□□ -2.59
SRPXP78539 MIR4490-201ENST00000582647 84 ntBASIC-1.11□□□□□ -2.59
SRPXP78539 RNA5SP26-201ENST00000362406 119 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 RNA5SP225-201ENST00000410874 135 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 RNU6-634P-201ENST00000459134 106 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 AC091912.2-201ENST00000624798 167 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 MIR4679-1-201ENST00000637619 75 ntBASIC-1.12□□□□□ -2.59
SRPXP78539 MIR487B-201ENST00000385021 84 ntBASIC-1.13□□□□□ -2.59
SRPXP78539 RNU6-279P-201ENST00000391297 101 ntBASIC-1.13□□□□□ -2.59
SRPXP78539 SNORD1B-201ENST00000363091 84 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 SNORD78.1-201ENST00000390866 65 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 MIR548H1-201ENST00000408610 102 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 AC108019.1-201ENST00000512540 175 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 RNU6-523P-201ENST00000516304 54 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 RNU6-118P-201ENST00000516552 102 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 RNU6-980P-201ENST00000516925 103 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 MIR4723-201ENST00000585070 81 ntBASIC-1.14□□□□□ -2.59
SRPXP78539 RNU6-630P-201ENST00000391258 106 ntBASIC-1.15□□□□□ -2.59
SRPXP78539 RNU6-542P-201ENST00000516405 103 ntBASIC-1.15□□□□□ -2.59
SRPXP78539 MIR4756-201ENST00000577874 78 ntBASIC-1.15□□□□□ -2.59
SRPXP78539 MIR664B-201ENST00000626756 61 ntBASIC-1.15□□□□□ -2.59
SRPXP78539 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.16□□□□□ -2.6
SRPXP78539 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
SRPXP78539 RNU6-663P-201ENST00000391105 106 ntBASIC-1.16□□□□□ -2.6
SRPXP78539 MIR6874-201ENST00000635894 71 ntBASIC-1.16□□□□□ -2.6
SRPXP78539 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.17□□□□□ -2.6
SRPXP78539 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.17□□□□□ -2.6
SRPXP78539 MIR520D-201ENST00000385002 87 ntBASIC-1.17□□□□□ -2.6
SRPXP78539 MIR1302-4-201ENST00000408701 150 ntBASIC-1.17□□□□□ -2.6
SRPXP78539 RNU6-576P-201ENST00000390854 102 ntBASIC-1.18□□□□□ -2.6
SRPXP78539 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.18□□□□□ -2.6
SRPXP78539 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.19□□□□□ -2.6
SRPXP78539 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.19□□□□□ -2.6
SRPXP78539 RNU6-119P-201ENST00000364882 107 ntBASIC-1.2□□□□□ -2.6
SRPXP78539 RNU6-92P-201ENST00000605893 104 ntBASIC-1.2□□□□□ -2.6
SRPXP78539 MIR548AA1-201ENST00000384971 97 ntBASIC-1.21□□□□□ -2.6
SRPXP78539 AC090616.4-201ENST00000448026 115 ntBASIC-1.21□□□□□ -2.6
SRPXP78539 MIR3139-201ENST00000579145 76 ntBASIC-1.21□□□□□ -2.6
SRPXP78539 RNU6-608P-201ENST00000383927 104 ntBASIC-1.22□□□□□ -2.6
SRPXP78539 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.22□□□□□ -2.6
SRPXP78539 SNORD30.1-201ENST00000391309 70 ntBASIC-1.22□□□□□ -2.6
SRPXP78539 MIR3170-201ENST00000582699 77 ntBASIC-1.22□□□□□ -2.6
SRPXP78539 MIR579-201ENST00000385221 98 ntBASIC-1.23□□□□□ -2.61
SRPXP78539 RNU6-172P-201ENST00000411000 93 ntBASIC-1.23□□□□□ -2.61
SRPXP78539 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.23□□□□□ -2.61
SRPXP78539 SNORD60.1-201ENST00000362451 73 ntBASIC-1.24□□□□□ -2.61
SRPXP78539 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.24□□□□□ -2.61
SRPXP78539 RNU7-151P-201ENST00000516930 53 ntBASIC-1.24□□□□□ -2.61
SRPXP78539 RNA5SP93-201ENST00000362525 114 ntBASIC-1.25□□□□□ -2.61
SRPXP78539 RNA5SP405-201ENST00000363059 114 ntBASIC-1.25□□□□□ -2.61
SRPXP78539 RNU6-164P-201ENST00000364604 103 ntBASIC-1.25□□□□□ -2.61
SRPXP78539 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.25□□□□□ -2.61
SRPXP78539 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.25□□□□□ -2.61
SRPXP78539 RNU6-871P-201ENST00000516122 100 ntBASIC-1.25□□□□□ -2.61
SRPXP78539 SNORA25.4-201ENST00000363666 124 ntBASIC-1.26□□□□□ -2.61
SRPXP78539 SNORD54-201ENST00000459159 67 ntBASIC-1.26□□□□□ -2.61
SRPXP78539 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.27□□□□□ -2.61
SRPXP78539 RNU6-649P-201ENST00000384463 107 ntBASIC-1.28□□□□□ -2.61
SRPXP78539 MT-TM-201ENST00000387377 68 ntBASIC-1.28□□□□□ -2.61
SRPXP78539 RNU6-995P-201ENST00000391244 107 ntBASIC-1.28□□□□□ -2.61
SRPXP78539 AC005520.4-201ENST00000604337 90 ntBASIC-1.28□□□□□ -2.61
SRPXP78539 RNU6-247P-201ENST00000362636 107 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 U6.111-201ENST00000636093 83 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 MIR7978-201ENST00000636158 59 ntBASIC-1.29□□□□□ -2.62
SRPXP78539 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.3□□□□□ -2.62
SRPXP78539 RNU6-258P-201ENST00000390884 101 ntBASIC-1.3□□□□□ -2.62
SRPXP78539 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.3□□□□□ -2.62
SRPXP78539 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
SRPXP78539 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.31□□□□□ -2.62
SRPXP78539 SNORA25.5-201ENST00000363782 126 ntBASIC-1.32□□□□□ -2.62
SRPXP78539 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.32□□□□□ -2.62
SRPXP78539 RNU6-776P-201ENST00000364403 104 ntBASIC-1.33□□□□□ -2.62
SRPXP78539 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.33□□□□□ -2.62
SRPXP78539 RNU6-539P-201ENST00000516665 103 ntBASIC-1.33□□□□□ -2.62
SRPXP78539 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.34□□□□□ -2.62
SRPXP78539 SNORD63.2-201ENST00000516303 64 ntBASIC-1.34□□□□□ -2.62
SRPXP78539 RNY4P7-201ENST00000364600 96 ntBASIC-1.35□□□□□ -2.63
SRPXP78539 RNU6-231P-201ENST00000517122 103 ntBASIC-1.35□□□□□ -2.63
SRPXP78539 MIR4511-201ENST00000582784 87 ntBASIC-1.35□□□□□ -2.63
SRPXP78539 MIR4662A-201ENST00000637499 67 ntBASIC-1.35□□□□□ -2.63
SRPXP78539 RNU6-669P-201ENST00000365575 107 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 MIR125B1-201ENST00000385236 88 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 RNU6-400P-201ENST00000391173 106 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 AC018880.2-201ENST00000414265 201 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms