Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR4662A-201ENST00000637499 67 ntBASIC-0.97□□□□□ -2.56
HDAC4P56524 RNY4P27-201ENST00000363341 96 ntBASIC-0.98□□□□□ -2.57
HDAC4P56524 MIR507-201ENST00000385234 94 ntBASIC-0.98□□□□□ -2.57
HDAC4P56524 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
HDAC4P56524 SNORD30.1-201ENST00000391309 70 ntBASIC-0.98□□□□□ -2.57
HDAC4P56524 RNU6-92P-201ENST00000605893 104 ntBASIC-0.98□□□□□ -2.57
HDAC4P56524 SNORA25.4-201ENST00000363666 124 ntBASIC-0.99□□□□□ -2.57
HDAC4P56524 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.99□□□□□ -2.57
HDAC4P56524 SNORA72.7-201ENST00000516349 94 ntBASIC-0.99□□□□□ -2.57
HDAC4P56524 MIR548Q-201ENST00000408404 100 ntBASIC-1□□□□□ -2.57
HDAC4P56524 MIR4306-201ENST00000583390 91 ntBASIC-1□□□□□ -2.57
HDAC4P56524 U2.18-201ENST00000622185 84 ntBASIC-1□□□□□ -2.57
HDAC4P56524 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
HDAC4P56524 RNU6-649P-201ENST00000384463 107 ntBASIC-1.02□□□□□ -2.57
HDAC4P56524 RNU6-576P-201ENST00000390854 102 ntBASIC-1.02□□□□□ -2.57
HDAC4P56524 RNU6-539P-201ENST00000516665 103 ntBASIC-1.02□□□□□ -2.57
HDAC4P56524 SNORD1B-201ENST00000363091 84 ntBASIC-1.03□□□□□ -2.57
HDAC4P56524 MIR548AA1-201ENST00000384971 97 ntBASIC-1.03□□□□□ -2.57
HDAC4P56524 AC005520.4-201ENST00000604337 90 ntBASIC-1.03□□□□□ -2.57
HDAC4P56524 RNU6-164P-201ENST00000364604 103 ntBASIC-1.04□□□□□ -2.58
HDAC4P56524 AC090616.4-201ENST00000448026 115 ntBASIC-1.04□□□□□ -2.58
HDAC4P56524 U6.111-201ENST00000636093 83 ntBASIC-1.04□□□□□ -2.58
HDAC4P56524 MIR520D-201ENST00000385002 87 ntBASIC-1.05□□□□□ -2.58
HDAC4P56524 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.05□□□□□ -2.58
HDAC4P56524 SNORD60.1-201ENST00000362451 73 ntBASIC-1.06□□□□□ -2.58
HDAC4P56524 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.06□□□□□ -2.58
HDAC4P56524 RNU6-608P-201ENST00000383927 104 ntBASIC-1.06□□□□□ -2.58
HDAC4P56524 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.06□□□□□ -2.58
HDAC4P56524 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.06□□□□□ -2.58
HDAC4P56524 RPL35AP4-201ENST00000412007 102 ntBASIC-1.07□□□□□ -2.58
HDAC4P56524 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.07□□□□□ -2.58
HDAC4P56524 MIR3170-201ENST00000582699 77 ntBASIC-1.07□□□□□ -2.58
HDAC4P56524 MIR1246-201ENST00000636535 73 ntBASIC-1.08□□□□□ -2.58
HDAC4P56524 SNORA25.5-201ENST00000363782 126 ntBASIC-1.09□□□□□ -2.58
HDAC4P56524 MIR4511-201ENST00000582784 87 ntBASIC-1.09□□□□□ -2.58
HDAC4P56524 AC103706.3-201ENST00000636297 85 ntBASIC-1.09□□□□□ -2.58
HDAC4P56524 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.1□□□□□ -2.59
HDAC4P56524 RNU6-172P-201ENST00000411000 93 ntBASIC-1.1□□□□□ -2.59
HDAC4P56524 AC091912.2-201ENST00000624798 167 ntBASIC-1.1□□□□□ -2.59
HDAC4P56524 MIR8485-201ENST00000401372 91 ntBASIC-1.11□□□□□ -2.59
HDAC4P56524 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.11□□□□□ -2.59
HDAC4P56524 MIR23C-201ENST00000579846 100 ntBASIC-1.11□□□□□ -2.59
HDAC4P56524 RNU6-800P-201ENST00000384473 103 ntBASIC-1.12□□□□□ -2.59
HDAC4P56524 RNU6-995P-201ENST00000391244 107 ntBASIC-1.12□□□□□ -2.59
HDAC4P56524 RNU6-122P-201ENST00000516818 107 ntBASIC-1.12□□□□□ -2.59
HDAC4P56524 RNU7-151P-201ENST00000516930 53 ntBASIC-1.12□□□□□ -2.59
HDAC4P56524 RNU6-706P-201ENST00000517229 104 ntBASIC-1.12□□□□□ -2.59
HDAC4P56524 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.12□□□□□ -2.59
HDAC4P56524 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.13□□□□□ -2.59
HDAC4P56524 MIR125B1-201ENST00000385236 88 ntBASIC-1.13□□□□□ -2.59
HDAC4P56524 MIR7978-201ENST00000636158 59 ntBASIC-1.13□□□□□ -2.59
HDAC4P56524 AC018880.2-201ENST00000414265 201 ntBASIC-1.14□□□□□ -2.59
HDAC4P56524 AC138207.3-201ENST00000585289 166 ntBASIC-1.14□□□□□ -2.59
HDAC4P56524 RNU6-79P-201ENST00000362511 107 ntBASIC-1.15□□□□□ -2.59
HDAC4P56524 RNU6-247P-201ENST00000362636 107 ntBASIC-1.16□□□□□ -2.6
HDAC4P56524 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.16□□□□□ -2.6
HDAC4P56524 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.16□□□□□ -2.6
HDAC4P56524 RNU6-258P-201ENST00000390884 101 ntBASIC-1.16□□□□□ -2.6
HDAC4P56524 RNU7-160P-201ENST00000516660 62 ntBASIC-1.16□□□□□ -2.6
HDAC4P56524 MIR6874-201ENST00000635894 71 ntBASIC-1.16□□□□□ -2.6
HDAC4P56524 MIR579-201ENST00000385221 98 ntBASIC-1.17□□□□□ -2.6
HDAC4P56524 MIR7110-201ENST00000612638 86 ntBASIC-1.17□□□□□ -2.6
HDAC4P56524 MIR6502-201ENST00000617296 76 ntBASIC-1.17□□□□□ -2.6
HDAC4P56524 RNU6-940P-201ENST00000363433 104 ntBASIC-1.18□□□□□ -2.6
HDAC4P56524 RNU6-226P-201ENST00000363778 107 ntBASIC-1.18□□□□□ -2.6
HDAC4P56524 RNU6-638P-201ENST00000516582 104 ntBASIC-1.18□□□□□ -2.6
HDAC4P56524 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.18□□□□□ -2.6
HDAC4P56524 RNU6-231P-201ENST00000517122 103 ntBASIC-1.18□□□□□ -2.6
HDAC4P56524 SNORA27.2-201ENST00000363365 126 ntBASIC-1.19□□□□□ -2.6
HDAC4P56524 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.19□□□□□ -2.6
HDAC4P56524 RNU6-669P-201ENST00000365575 107 ntBASIC-1.19□□□□□ -2.6
HDAC4P56524 RNU6-400P-201ENST00000391173 106 ntBASIC-1.19□□□□□ -2.6
HDAC4P56524 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.2□□□□□ -2.6
HDAC4P56524 HLA-S-202ENST00000425174 53 ntBASIC-1.2□□□□□ -2.6
HDAC4P56524 AC114801.3-201ENST00000510231 177 ntBASIC-1.21□□□□□ -2.6
HDAC4P56524 SNORD63.2-201ENST00000516303 64 ntBASIC-1.21□□□□□ -2.6
HDAC4P56524 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.21□□□□□ -2.6
HDAC4P56524 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.23□□□□□ -2.61
HDAC4P56524 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.23□□□□□ -2.61
HDAC4P56524 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.24□□□□□ -2.61
HDAC4P56524 SNORD116.2-201ENST00000391251 93 ntBASIC-1.24□□□□□ -2.61
HDAC4P56524 AC110620.1-201ENST00000416042 228 ntBASIC-1.24□□□□□ -2.61
HDAC4P56524 RNU7-119P-201ENST00000459279 63 ntBASIC-1.24□□□□□ -2.61
HDAC4P56524 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.25□□□□□ -2.61
HDAC4P56524 RNU6-810P-201ENST00000364001 107 ntBASIC-1.25□□□□□ -2.61
HDAC4P56524 RNU6-471P-201ENST00000383944 106 ntBASIC-1.25□□□□□ -2.61
HDAC4P56524 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.25□□□□□ -2.61
HDAC4P56524 AC120024.2-201ENST00000576526 175 ntBASIC-1.25□□□□□ -2.61
HDAC4P56524 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.25□□□□□ -2.61
HDAC4P56524 RNU6-828P-201ENST00000364876 107 ntBASIC-1.26□□□□□ -2.61
HDAC4P56524 SNORA40B-201ENST00000385573 128 ntBASIC-1.26□□□□□ -2.61
HDAC4P56524 MIR5591-201ENST00000578248 65 ntBASIC-1.26□□□□□ -2.61
HDAC4P56524 MIR3938-201ENST00000582157 103 ntBASIC-1.26□□□□□ -2.61
HDAC4P56524 RNU6-974P-201ENST00000384099 108 ntBASIC-1.27□□□□□ -2.61
HDAC4P56524 MIR4770-201ENST00000579149 58 ntBASIC-1.27□□□□□ -2.61
HDAC4P56524 MIR466-201ENST00000580653 84 ntBASIC-1.27□□□□□ -2.61
HDAC4P56524 RNU6-563P-201ENST00000364872 108 ntBASIC-1.28□□□□□ -2.61
HDAC4P56524 MIR4520-1-201ENST00000582609 70 ntBASIC-1.28□□□□□ -2.61
HDAC4P56524 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.29□□□□□ -2.62
HDAC4P56524 MIR496-201ENST00000385226 102 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms