Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR548H1-201ENST00000408610 102 ntBASIC-1.5□□□□□ -2.65
SCN4AP35499 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.51□□□□□ -2.65
SCN4AP35499 SNORD60.1-201ENST00000362451 73 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 RNU6-153P-201ENST00000364422 104 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 RNU6-787P-201ENST00000384032 107 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 RNU6-663P-201ENST00000391105 106 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 MIR5582-201ENST00000579697 68 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 MIR494-201ENST00000349529 81 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 SNORD115-31-201ENST00000365318 82 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 MIR4712-201ENST00000583750 82 ntBASIC-1.52□□□□□ -2.65
SCN4AP35499 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
SCN4AP35499 RNU6-995P-201ENST00000391244 107 ntBASIC-1.53□□□□□ -2.65
SCN4AP35499 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 MIR3134-201ENST00000579433 74 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.54□□□□□ -2.66
SCN4AP35499 RNY4P27-201ENST00000363341 96 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 RNU6-226P-201ENST00000363778 107 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 AC013734.1-201ENST00000619329 111 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.55□□□□□ -2.66
SCN4AP35499 RNU6-841P-201ENST00000383872 107 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-974P-201ENST00000384099 108 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 MIR579-201ENST00000385221 98 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-563P-201ENST00000364872 108 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-687P-201ENST00000516443 89 ntBASIC-1.56□□□□□ -2.66
SCN4AP35499 RNU6-895P-201ENST00000384125 103 ntBASIC-1.57□□□□□ -2.66
SCN4AP35499 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.57□□□□□ -2.66
SCN4AP35499 RNU6-523P-201ENST00000516304 54 ntBASIC-1.58□□□□□ -2.66
SCN4AP35499 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.58□□□□□ -2.66
SCN4AP35499 RNU6-411P-201ENST00000384451 107 ntBASIC-1.59□□□□□ -2.66
SCN4AP35499 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.59□□□□□ -2.66
SCN4AP35499 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.59□□□□□ -2.66
SCN4AP35499 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 SNORD45.2-201ENST00000363552 72 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 RNU6-172P-201ENST00000411000 93 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 MIR548AM-201ENST00000584298 74 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 U2.22-201ENST00000636441 106 ntBASIC-1.6□□□□□ -2.67
SCN4AP35499 RNU6-228P-201ENST00000362700 106 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 SNORD18C-201ENST00000362704 69 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 U6.97-201ENST00000636904 101 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 SNORD63.2-201ENST00000516303 64 ntBASIC-1.61□□□□□ -2.67
SCN4AP35499 MIR379-201ENST00000362218 67 ntBASIC-1.62□□□□□ -2.67
SCN4AP35499 RNU6-634P-201ENST00000459134 106 ntBASIC-1.62□□□□□ -2.67
SCN4AP35499 MIR3938-201ENST00000582157 103 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 MIR3123-201ENST00000583417 75 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNU6-810P-201ENST00000364001 107 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNU6-361P-201ENST00000364454 107 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNA5SP86-201ENST00000390869 98 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 RNU7-160P-201ENST00000516660 62 ntBASIC-1.63□□□□□ -2.67
SCN4AP35499 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.64□□□□□ -2.67
SCN4AP35499 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.64□□□□□ -2.67
SCN4AP35499 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.65□□□□□ -2.67
SCN4AP35499 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 RNU6-242P-201ENST00000384359 107 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 RNU6-649P-201ENST00000384463 107 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 RNU6-258P-201ENST00000390884 101 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 SNORD116.2-201ENST00000391251 93 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 MIR548W-201ENST00000581970 74 ntBASIC-1.66□□□□□ -2.67
SCN4AP35499 MIR125B1-201ENST00000385236 88 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 SNORA40B-201ENST00000385573 128 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 MIR7110-201ENST00000612638 86 ntBASIC-1.66□□□□□ -2.68
SCN4AP35499 MIR548N-201ENST00000408742 75 ntBASIC-1.67□□□□□ -2.68
SCN4AP35499 AC062037.1-201ENST00000605302 128 ntBASIC-1.67□□□□□ -2.68
SCN4AP35499 SNORA25.4-201ENST00000363666 124 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 RNU6-279P-201ENST00000391297 101 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 MIR4511-201ENST00000582784 87 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 MIR3202-2-201ENST00000635980 79 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 snoU13.10-201ENST00000459301 103 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 AC108019.1-201ENST00000512540 175 ntBASIC-1.68□□□□□ -2.68
SCN4AP35499 RNU6-119P-201ENST00000364882 107 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 RNU6-540P-201ENST00000384622 101 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 MIR487B-201ENST00000385021 84 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.69□□□□□ -2.68
SCN4AP35499 RNU6-520P-201ENST00000384717 104 ntBASIC-1.7□□□□□ -2.68
SCN4AP35499 RNU7-119P-201ENST00000459279 63 ntBASIC-1.7□□□□□ -2.68
SCN4AP35499 MIR664B-201ENST00000626756 61 ntBASIC-1.7□□□□□ -2.68
SCN4AP35499 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
SCN4AP35499 SNORD18.1-201ENST00000363807 70 ntBASIC-1.71□□□□□ -2.68
SCN4AP35499 RNU6-983P-201ENST00000516004 103 ntBASIC-1.71□□□□□ -2.68
SCN4AP35499 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.71□□□□□ -2.68
SCN4AP35499 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.72□□□□□ -2.68
SCN4AP35499 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.72□□□□□ -2.68
SCN4AP35499 MIR4679-1-201ENST00000637619 75 ntBASIC-1.72□□□□□ -2.68
SCN4AP35499 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 RNU6-573P-201ENST00000383938 106 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 SNORA26.2-201ENST00000390922 122 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 SNORD30.1-201ENST00000391309 70 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 RNU6-857P-201ENST00000515893 110 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 MIR4756-201ENST00000577874 78 ntBASIC-1.73□□□□□ -2.69
SCN4AP35499 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.74□□□□□ -2.69
SCN4AP35499 SNORA17.4-201ENST00000391287 132 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms