Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 snoU83B.1-201ENST00000517136 88 ntBASIC-0.69□□□□□ -2.52
CD40P25942 MIR3938-201ENST00000582157 103 ntBASIC-0.69□□□□□ -2.52
CD40P25942 MIR29B1-201ENST00000385015 81 ntBASIC-0.7□□□□□ -2.52
CD40P25942 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.7□□□□□ -2.52
CD40P25942 AC139453.2-201ENST00000487255 133 ntBASIC-0.7□□□□□ -2.52
CD40P25942 RNU6-446P-201ENST00000362827 106 ntBASIC-0.71□□□□□ -2.52
CD40P25942 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.71□□□□□ -2.52
CD40P25942 RNU6-590P-201ENST00000365039 107 ntBASIC-0.71□□□□□ -2.52
CD40P25942 SNORA40B-201ENST00000385573 128 ntBASIC-0.71□□□□□ -2.52
CD40P25942 RNU6-995P-201ENST00000391244 107 ntBASIC-0.71□□□□□ -2.52
CD40P25942 SNORD63.2-201ENST00000516303 64 ntBASIC-0.71□□□□□ -2.52
CD40P25942 uc_338.19-201ENST00000616808 99 ntBASIC-0.71□□□□□ -2.52
CD40P25942 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.72□□□□□ -2.52
CD40P25942 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.72□□□□□ -2.52
CD40P25942 RNU6-247P-201ENST00000362636 107 ntBASIC-0.73□□□□□ -2.53
CD40P25942 MIR224-201ENST00000384889 81 ntBASIC-0.73□□□□□ -2.53
CD40P25942 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CD40P25942 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.73□□□□□ -2.53
CD40P25942 SNORD83B-201ENST00000386745 93 ntBASIC-0.75□□□□□ -2.53
CD40P25942 HAR1A.1-201ENST00000459583 118 ntBASIC-0.75□□□□□ -2.53
CD40P25942 RNU7-160P-201ENST00000516660 62 ntBASIC-0.75□□□□□ -2.53
CD40P25942 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.75□□□□□ -2.53
CD40P25942 MIR633-201ENST00000384821 98 ntBASIC-0.76□□□□□ -2.53
CD40P25942 MIR3681-201ENST00000580089 72 ntBASIC-0.76□□□□□ -2.53
CD40P25942 SNORD114-15-201ENST00000364687 72 ntBASIC-0.77□□□□□ -2.53
CD40P25942 RNU7-119P-201ENST00000459279 63 ntBASIC-0.77□□□□□ -2.53
CD40P25942 AC125388.1-201ENST00000459631 156 ntBASIC-0.77□□□□□ -2.53
CD40P25942 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.77□□□□□ -2.53
CD40P25942 SNORD113-4-201ENST00000364802 75 ntBASIC-0.78□□□□□ -2.53
CD40P25942 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.78□□□□□ -2.53
CD40P25942 MIR6874-201ENST00000635894 71 ntBASIC-0.78□□□□□ -2.53
CD40P25942 RNU6-829P-201ENST00000363700 112 ntBASIC-0.79□□□□□ -2.54
CD40P25942 RNU6-164P-201ENST00000364604 103 ntBASIC-0.79□□□□□ -2.54
CD40P25942 RNU6-563P-201ENST00000364872 108 ntBASIC-0.79□□□□□ -2.54
CD40P25942 RNU6-520P-201ENST00000384717 104 ntBASIC-0.79□□□□□ -2.54
CD40P25942 RNY1P9-201ENST00000532431 109 ntBASIC-0.79□□□□□ -2.54
CD40P25942 AC091912.2-201ENST00000624798 167 ntBASIC-0.79□□□□□ -2.54
CD40P25942 RNU6-828P-201ENST00000364876 107 ntBASIC-0.8□□□□□ -2.54
CD40P25942 RNY3P8-201ENST00000411366 126 ntBASIC-0.8□□□□□ -2.54
CD40P25942 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.81□□□□□ -2.54
CD40P25942 SNORA27.2-201ENST00000363365 126 ntBASIC-0.81□□□□□ -2.54
CD40P25942 MIR8485-201ENST00000401372 91 ntBASIC-0.81□□□□□ -2.54
CD40P25942 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.81□□□□□ -2.54
CD40P25942 MT-TQ-201ENST00000387372 72 ntBASIC-0.82□□□□□ -2.54
CD40P25942 MIR1468-201ENST00000410600 86 ntBASIC-0.82□□□□□ -2.54
CD40P25942 snoU13.19-201ENST00000459148 104 ntBASIC-0.82□□□□□ -2.54
CD40P25942 RNU6-576P-201ENST00000390854 102 ntBASIC-0.83□□□□□ -2.54
CD40P25942 AC120024.2-201ENST00000576526 175 ntBASIC-0.83□□□□□ -2.54
CD40P25942 AC013734.1-201ENST00000619329 111 ntBASIC-0.84□□□□□ -2.54
CD40P25942 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.84□□□□□ -2.54
CD40P25942 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.85□□□□□ -2.55
CD40P25942 SCARNA17-201ENST00000516183 144 ntBASIC-0.85□□□□□ -2.55
CD40P25942 MIR378F-201ENST00000578143 78 ntBASIC-0.85□□□□□ -2.55
CD40P25942 RNU6-79P-201ENST00000362511 107 ntBASIC-0.86□□□□□ -2.55
CD40P25942 AC018880.2-201ENST00000414265 201 ntBASIC-0.86□□□□□ -2.55
CD40P25942 AC079150.2-201ENST00000443733 78 ntBASIC-0.86□□□□□ -2.55
CD40P25942 RNU6-419P-201ENST00000517030 63 ntBASIC-0.86□□□□□ -2.55
CD40P25942 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.87□□□□□ -2.55
CD40P25942 RNU4-63P-201ENST00000411313 118 ntBASIC-0.87□□□□□ -2.55
CD40P25942 AL451105.1-201ENST00000450005 189 ntBASIC-0.87□□□□□ -2.55
CD40P25942 RNU6-530P-201ENST00000391180 107 ntBASIC-0.9□□□□□ -2.55
CD40P25942 MIR202-201ENST00000362219 110 ntBASIC-0.91□□□□□ -2.56
CD40P25942 MIR23C-201ENST00000579846 100 ntBASIC-0.91□□□□□ -2.56
CD40P25942 MIR548X-201ENST00000580069 75 ntBASIC-0.91□□□□□ -2.56
CD40P25942 MIR548AX-201ENST00000580117 73 ntBASIC-0.91□□□□□ -2.56
CD40P25942 RNU6-499P-201ENST00000365615 107 ntBASIC-0.92□□□□□ -2.56
CD40P25942 RNU6-30P-201ENST00000384561 107 ntBASIC-0.92□□□□□ -2.56
CD40P25942 MIR581-201ENST00000384895 96 ntBASIC-0.92□□□□□ -2.56
CD40P25942 RNU6-788P-201ENST00000390967 104 ntBASIC-0.92□□□□□ -2.56
CD40P25942 U6.97-201ENST00000636904 101 ntBASIC-0.92□□□□□ -2.56
CD40P25942 MIR6502-201ENST00000617296 76 ntBASIC-0.93□□□□□ -2.56
CD40P25942 RNU6-742P-201ENST00000365289 107 ntBASIC-0.94□□□□□ -2.56
CD40P25942 RNU6-980P-201ENST00000516925 103 ntBASIC-0.94□□□□□ -2.56
CD40P25942 MIR4306-201ENST00000583390 91 ntBASIC-0.95□□□□□ -2.56
CD40P25942 RNU6-361P-201ENST00000364454 107 ntBASIC-0.97□□□□□ -2.56
CD40P25942 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.97□□□□□ -2.56
CD40P25942 RNU6-400P-201ENST00000391173 106 ntBASIC-0.98□□□□□ -2.57
CD40P25942 MIR4426-201ENST00000640330 63 ntBASIC-0.98□□□□□ -2.57
CD40P25942 SNORA17.4-201ENST00000391287 132 ntBASIC-0.99□□□□□ -2.57
CD40P25942 MIR548N-201ENST00000408742 75 ntBASIC-0.99□□□□□ -2.57
CD40P25942 MIR4520-1-201ENST00000582609 70 ntBASIC-0.99□□□□□ -2.57
CD40P25942 Y_RNA.223-201ENST00000364290 113 ntBASIC-1□□□□□ -2.57
CD40P25942 Y_RNA.722-201ENST00000517279 114 ntBASIC-1□□□□□ -2.57
CD40P25942 SNORD45.2-201ENST00000363552 72 ntBASIC-1.01□□□□□ -2.57
CD40P25942 RNU4-33P-201ENST00000364316 85 ntBASIC-1.01□□□□□ -2.57
CD40P25942 RNU6-695P-201ENST00000391157 104 ntBASIC-1.03□□□□□ -2.57
CD40P25942 SNORD60-201ENST00000383903 83 ntBASIC-1.04□□□□□ -2.58
CD40P25942 RNU6-68P-201ENST00000516576 104 ntBASIC-1.04□□□□□ -2.58
CD40P25942 MIR4324-201ENST00000584846 72 ntBASIC-1.04□□□□□ -2.58
CD40P25942 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.05□□□□□ -2.58
CD40P25942 RNA5SP67-201ENST00000516422 131 ntBASIC-1.06□□□□□ -2.58
CD40P25942 MIR3123-201ENST00000583417 75 ntBASIC-1.06□□□□□ -2.58
CD40P25942 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.07□□□□□ -2.58
CD40P25942 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.07□□□□□ -2.58
CD40P25942 RNU6-936P-201ENST00000384005 107 ntBASIC-1.07□□□□□ -2.58
CD40P25942 MIR487B-201ENST00000385021 84 ntBASIC-1.07□□□□□ -2.58
CD40P25942 RNU6-300P-201ENST00000459080 104 ntBASIC-1.07□□□□□ -2.58
CD40P25942 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.07□□□□□ -2.58
CD40P25942 SNORD18C-201ENST00000362704 69 ntBASIC-1.08□□□□□ -2.58
CD40P25942 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms