Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
VAMP1P23763 MIR4511-201ENST00000582784 87 ntBASIC-1.16□□□□□ -2.6
VAMP1P23763 RNU6-226P-201ENST00000363778 107 ntBASIC-1.17□□□□□ -2.6
VAMP1P23763 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.17□□□□□ -2.6
VAMP1P23763 MIR1246-201ENST00000636535 73 ntBASIC-1.17□□□□□ -2.6
VAMP1P23763 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.21□□□□□ -2.6
VAMP1P23763 SNORD60.1-201ENST00000362451 73 ntBASIC-1.22□□□□□ -2.6
VAMP1P23763 RNU6-598P-201ENST00000364017 105 ntBASIC-1.22□□□□□ -2.6
VAMP1P23763 RNU6-995P-201ENST00000391244 107 ntBASIC-1.22□□□□□ -2.6
VAMP1P23763 MIR4490-201ENST00000582647 84 ntBASIC-1.22□□□□□ -2.6
VAMP1P23763 RNY4P27-201ENST00000363341 96 ntBASIC-1.25□□□□□ -2.61
VAMP1P23763 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.25□□□□□ -2.61
VAMP1P23763 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.25□□□□□ -2.61
VAMP1P23763 MIR4306-201ENST00000583390 91 ntBASIC-1.25□□□□□ -2.61
VAMP1P23763 U2.18-201ENST00000622185 84 ntBASIC-1.25□□□□□ -2.61
VAMP1P23763 MIR548AA1-201ENST00000384971 97 ntBASIC-1.26□□□□□ -2.61
VAMP1P23763 RNU6-940P-201ENST00000363433 104 ntBASIC-1.27□□□□□ -2.61
VAMP1P23763 RNU6-706P-201ENST00000517229 104 ntBASIC-1.27□□□□□ -2.61
VAMP1P23763 MIR5683-201ENST00000636514 76 ntBASIC-1.27□□□□□ -2.61
VAMP1P23763 SNORD1B-201ENST00000363091 84 ntBASIC-1.28□□□□□ -2.61
VAMP1P23763 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.28□□□□□ -2.61
VAMP1P23763 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.28□□□□□ -2.61
VAMP1P23763 snoU83B.1-201ENST00000517136 88 ntBASIC-1.28□□□□□ -2.61
VAMP1P23763 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.29□□□□□ -2.62
VAMP1P23763 RNU6-172P-201ENST00000411000 93 ntBASIC-1.29□□□□□ -2.62
VAMP1P23763 HLA-S-202ENST00000425174 53 ntBASIC-1.31□□□□□ -2.62
VAMP1P23763 RNU6-122P-201ENST00000516818 107 ntBASIC-1.31□□□□□ -2.62
VAMP1P23763 MIR507-201ENST00000385234 94 ntBASIC-1.32□□□□□ -2.62
VAMP1P23763 MIR147A-201ENST00000385079 72 ntBASIC-1.34□□□□□ -2.62
VAMP1P23763 SNORD64-201ENST00000386683 67 ntBASIC-1.34□□□□□ -2.62
VAMP1P23763 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.34□□□□□ -2.62
VAMP1P23763 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.35□□□□□ -2.63
VAMP1P23763 SNORD19-201ENST00000391191 68 ntBASIC-1.35□□□□□ -2.63
VAMP1P23763 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.36□□□□□ -2.63
VAMP1P23763 MIR7110-201ENST00000612638 86 ntBASIC-1.36□□□□□ -2.63
VAMP1P23763 RNU6-247P-201ENST00000362636 107 ntBASIC-1.37□□□□□ -2.63
VAMP1P23763 RNU6-431P-201ENST00000383874 107 ntBASIC-1.37□□□□□ -2.63
VAMP1P23763 RNU6-471P-201ENST00000383944 106 ntBASIC-1.37□□□□□ -2.63
VAMP1P23763 SNORD116.2-201ENST00000391251 93 ntBASIC-1.39□□□□□ -2.63
VAMP1P23763 RNU7-119P-201ENST00000459279 63 ntBASIC-1.39□□□□□ -2.63
VAMP1P23763 MIR579-201ENST00000385221 98 ntBASIC-1.4□□□□□ -2.63
VAMP1P23763 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.41□□□□□ -2.64
VAMP1P23763 RNU7-151P-201ENST00000516930 53 ntBASIC-1.41□□□□□ -2.64
VAMP1P23763 RNU6-231P-201ENST00000517122 103 ntBASIC-1.41□□□□□ -2.64
VAMP1P23763 MIR466-201ENST00000580653 84 ntBASIC-1.41□□□□□ -2.64
VAMP1P23763 AC125388.1-201ENST00000459631 156 ntBASIC-1.42□□□□□ -2.64
VAMP1P23763 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.42□□□□□ -2.64
VAMP1P23763 RNU6-590P-201ENST00000365039 107 ntBASIC-1.44□□□□□ -2.64
VAMP1P23763 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.44□□□□□ -2.64
VAMP1P23763 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.44□□□□□ -2.64
VAMP1P23763 MIR8485-201ENST00000401372 91 ntBASIC-1.44□□□□□ -2.64
VAMP1P23763 AC110620.1-201ENST00000416042 228 ntBASIC-1.45□□□□□ -2.64
VAMP1P23763 MIR5591-201ENST00000578248 65 ntBASIC-1.46□□□□□ -2.64
VAMP1P23763 AP002795.1-201ENST00000534879 84 ntBASIC-1.47□□□□□ -2.64
VAMP1P23763 MIR382-201ENST00000637119 76 ntBASIC-1.47□□□□□ -2.64
VAMP1P23763 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.48□□□□□ -2.65
VAMP1P23763 MIR3938-201ENST00000582157 103 ntBASIC-1.48□□□□□ -2.65
VAMP1P23763 MIR496-201ENST00000385226 102 ntBASIC-1.49□□□□□ -2.65
VAMP1P23763 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.49□□□□□ -2.65
VAMP1P23763 MIR3170-201ENST00000582699 77 ntBASIC-1.49□□□□□ -2.65
VAMP1P23763 RPL35AP4-201ENST00000412007 102 ntBASIC-1.51□□□□□ -2.65
VAMP1P23763 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.52□□□□□ -2.65
VAMP1P23763 RNU7-160P-201ENST00000516660 62 ntBASIC-1.53□□□□□ -2.65
VAMP1P23763 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.53□□□□□ -2.65
VAMP1P23763 RNU6-810P-201ENST00000364001 107 ntBASIC-1.54□□□□□ -2.66
VAMP1P23763 RNU6-119P-201ENST00000364882 107 ntBASIC-1.55□□□□□ -2.66
VAMP1P23763 AC138207.3-201ENST00000585289 166 ntBASIC-1.55□□□□□ -2.66
VAMP1P23763 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.56□□□□□ -2.66
VAMP1P23763 RNU6-520P-201ENST00000384717 104 ntBASIC-1.56□□□□□ -2.66
VAMP1P23763 RNU6-983P-201ENST00000516004 103 ntBASIC-1.56□□□□□ -2.66
VAMP1P23763 RNU6-669P-201ENST00000365575 107 ntBASIC-1.58□□□□□ -2.66
VAMP1P23763 SNORD63.2-201ENST00000516303 64 ntBASIC-1.58□□□□□ -2.66
VAMP1P23763 RNU6-118P-201ENST00000516552 102 ntBASIC-1.58□□□□□ -2.66
VAMP1P23763 MIR4520-1-201ENST00000582609 70 ntBASIC-1.58□□□□□ -2.66
VAMP1P23763 MIR7978-201ENST00000636158 59 ntBASIC-1.58□□□□□ -2.66
VAMP1P23763 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.6□□□□□ -2.67
VAMP1P23763 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.61□□□□□ -2.67
VAMP1P23763 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.61□□□□□ -2.67
VAMP1P23763 SNORA40B-201ENST00000385573 128 ntBASIC-1.61□□□□□ -2.67
VAMP1P23763 RNU6-828P-201ENST00000364876 107 ntBASIC-1.62□□□□□ -2.67
VAMP1P23763 RNU6-576P-201ENST00000390854 102 ntBASIC-1.62□□□□□ -2.67
VAMP1P23763 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.63□□□□□ -2.67
VAMP1P23763 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.64□□□□□ -2.67
VAMP1P23763 MIR520D-201ENST00000385002 87 ntBASIC-1.64□□□□□ -2.67
VAMP1P23763 MIR29B1-201ENST00000385015 81 ntBASIC-1.64□□□□□ -2.67
VAMP1P23763 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
VAMP1P23763 RNU7-134P-201ENST00000458997 64 ntBASIC-1.64□□□□□ -2.67
VAMP1P23763 MIR6818-201ENST00000621576 65 ntBASIC-1.64□□□□□ -2.67
VAMP1P23763 RNA5SP93-201ENST00000362525 114 ntBASIC-1.66□□□□□ -2.68
VAMP1P23763 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.67□□□□□ -2.68
VAMP1P23763 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.67□□□□□ -2.68
VAMP1P23763 MIR4770-201ENST00000579149 58 ntBASIC-1.67□□□□□ -2.68
VAMP1P23763 MIR23C-201ENST00000579846 100 ntBASIC-1.67□□□□□ -2.68
VAMP1P23763 RNA5SP26-201ENST00000362406 119 ntBASIC-1.69□□□□□ -2.68
VAMP1P23763 RNY4P7-201ENST00000364600 96 ntBASIC-1.69□□□□□ -2.68
VAMP1P23763 RNU6-608P-201ENST00000383927 104 ntBASIC-1.69□□□□□ -2.68
VAMP1P23763 MIR125B1-201ENST00000385236 88 ntBASIC-1.69□□□□□ -2.68
VAMP1P23763 SNORD18.1-201ENST00000363807 70 ntBASIC-1.7□□□□□ -2.68
VAMP1P23763 AC090616.4-201ENST00000448026 115 ntBASIC-1.7□□□□□ -2.68
VAMP1P23763 SNORA40.16-201ENST00000517238 121 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms