Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.56□□□□□ -2.66
CD74P04233 MIR154-201ENST00000385243 84 ntBASIC-1.56□□□□□ -2.66
CD74P04233 RNY3P8-201ENST00000411366 126 ntBASIC-1.56□□□□□ -2.66
CD74P04233 RNU6-70P-201ENST00000516438 60 ntBASIC-1.56□□□□□ -2.66
CD74P04233 MIR7978-201ENST00000636158 59 ntBASIC-1.56□□□□□ -2.66
CD74P04233 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.57□□□□□ -2.66
CD74P04233 RNU6-669P-201ENST00000365575 107 ntBASIC-1.57□□□□□ -2.66
CD74P04233 RNU6-895P-201ENST00000384125 103 ntBASIC-1.57□□□□□ -2.66
CD74P04233 RNY4P30-201ENST00000410216 95 ntBASIC-1.57□□□□□ -2.66
CD74P04233 RNU4-88P-201ENST00000411220 86 ntBASIC-1.57□□□□□ -2.66
CD74P04233 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.57□□□□□ -2.66
CD74P04233 SNORD63.2-201ENST00000516303 64 ntBASIC-1.57□□□□□ -2.66
CD74P04233 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.58□□□□□ -2.66
CD74P04233 RNU6-841P-201ENST00000383872 107 ntBASIC-1.58□□□□□ -2.66
CD74P04233 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.58□□□□□ -2.66
CD74P04233 MIR23C-201ENST00000579846 100 ntBASIC-1.58□□□□□ -2.66
CD74P04233 RNU6-995P-201ENST00000391244 107 ntBASIC-1.6□□□□□ -2.67
CD74P04233 AL603908.1-201ENST00000406098 201 ntBASIC-1.6□□□□□ -2.67
CD74P04233 RNU6-172P-201ENST00000411000 93 ntBASIC-1.6□□□□□ -2.67
CD74P04233 MIR548W-201ENST00000581970 74 ntBASIC-1.6□□□□□ -2.67
CD74P04233 MIR4712-201ENST00000583750 82 ntBASIC-1.6□□□□□ -2.67
CD74P04233 MIR1245B-201ENST00000636115 69 ntBASIC-1.6□□□□□ -2.67
CD74P04233 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
CD74P04233 MIR494-201ENST00000349529 81 ntBASIC-1.61□□□□□ -2.67
CD74P04233 RNU6-980P-201ENST00000516925 103 ntBASIC-1.61□□□□□ -2.67
CD74P04233 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.61□□□□□ -2.67
CD74P04233 SNORD116-24-201ENST00000384549 92 ntBASIC-1.62□□□□□ -2.67
CD74P04233 MIR581-201ENST00000384895 96 ntBASIC-1.62□□□□□ -2.67
CD74P04233 MIR125B1-201ENST00000385236 88 ntBASIC-1.62□□□□□ -2.67
CD74P04233 snoU13.10-201ENST00000459301 103 ntBASIC-1.62□□□□□ -2.67
CD74P04233 RNU7-171P-201ENST00000459581 62 ntBASIC-1.62□□□□□ -2.67
CD74P04233 RNU6-789P-201ENST00000517105 102 ntBASIC-1.62□□□□□ -2.67
CD74P04233 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.63□□□□□ -2.67
CD74P04233 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.63□□□□□ -2.67
CD74P04233 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.63□□□□□ -2.67
CD74P04233 RNU6-523P-201ENST00000516304 54 ntBASIC-1.63□□□□□ -2.67
CD74P04233 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.63□□□□□ -2.67
CD74P04233 SNORA27.2-201ENST00000363365 126 ntBASIC-1.64□□□□□ -2.67
CD74P04233 RNU6-242P-201ENST00000384359 107 ntBASIC-1.64□□□□□ -2.67
CD74P04233 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.65□□□□□ -2.67
CD74P04233 MIR548AI-201ENST00000579940 88 ntBASIC-1.65□□□□□ -2.67
CD74P04233 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.65□□□□□ -2.67
CD74P04233 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.65□□□□□ -2.67
CD74P04233 RNA5SP405-201ENST00000363059 114 ntBASIC-1.66□□□□□ -2.68
CD74P04233 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.66□□□□□ -2.68
CD74P04233 RNU6-118P-201ENST00000516552 102 ntBASIC-1.66□□□□□ -2.68
CD74P04233 MIR3134-201ENST00000579433 74 ntBASIC-1.66□□□□□ -2.68
CD74P04233 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.66□□□□□ -2.68
CD74P04233 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.67□□□□□ -2.68
CD74P04233 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.67□□□□□ -2.68
CD74P04233 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.68□□□□□ -2.68
CD74P04233 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.68□□□□□ -2.68
CD74P04233 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.69□□□□□ -2.68
CD74P04233 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.69□□□□□ -2.68
CD74P04233 MIR450A2-201ENST00000385022 100 ntBASIC-1.7□□□□□ -2.68
CD74P04233 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
CD74P04233 RNU6-119P-201ENST00000364882 107 ntBASIC-1.71□□□□□ -2.68
CD74P04233 RNU6-542P-201ENST00000516405 103 ntBASIC-1.71□□□□□ -2.68
CD74P04233 RNU6-687P-201ENST00000516443 89 ntBASIC-1.71□□□□□ -2.68
CD74P04233 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.71□□□□□ -2.68
CD74P04233 MIR202-201ENST00000362219 110 ntBASIC-1.72□□□□□ -2.68
CD74P04233 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.72□□□□□ -2.68
CD74P04233 RNU6-194P-201ENST00000363862 105 ntBASIC-1.72□□□□□ -2.68
CD74P04233 RNU6-294P-201ENST00000364999 102 ntBASIC-1.72□□□□□ -2.68
CD74P04233 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.72□□□□□ -2.68
CD74P04233 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.72□□□□□ -2.68
CD74P04233 MIR3139-201ENST00000579145 76 ntBASIC-1.72□□□□□ -2.68
CD74P04233 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.73□□□□□ -2.69
CD74P04233 RNU6-406P-201ENST00000516470 107 ntBASIC-1.73□□□□□ -2.69
CD74P04233 MIR4666B-201ENST00000578142 81 ntBASIC-1.73□□□□□ -2.69
CD74P04233 RNU6-92P-201ENST00000605893 104 ntBASIC-1.73□□□□□ -2.69
CD74P04233 RNU6-810P-201ENST00000364001 107 ntBASIC-1.74□□□□□ -2.69
CD74P04233 RNU6-520P-201ENST00000384717 104 ntBASIC-1.75□□□□□ -2.69
CD74P04233 MIR496-201ENST00000385226 102 ntBASIC-1.75□□□□□ -2.69
CD74P04233 SNORD60.1-201ENST00000362451 73 ntBASIC-1.76□□□□□ -2.69
CD74P04233 RNU6-153P-201ENST00000364422 104 ntBASIC-1.76□□□□□ -2.69
CD74P04233 RNU6-411P-201ENST00000384451 107 ntBASIC-1.76□□□□□ -2.69
CD74P04233 RNU6-649P-201ENST00000384463 107 ntBASIC-1.76□□□□□ -2.69
CD74P04233 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.77□□□□□ -2.69
CD74P04233 MT-TM-201ENST00000387377 68 ntBASIC-1.77□□□□□ -2.69
CD74P04233 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.77□□□□□ -2.69
CD74P04233 SNORD18C-201ENST00000362704 69 ntBASIC-1.78□□□□□ -2.69
CD74P04233 RNU6-787P-201ENST00000384032 107 ntBASIC-1.78□□□□□ -2.69
CD74P04233 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.78□□□□□ -2.69
CD74P04233 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.79□□□□□ -2.7
CD74P04233 MIR548N-201ENST00000408742 75 ntBASIC-1.79□□□□□ -2.7
CD74P04233 RNU6-231P-201ENST00000517122 103 ntBASIC-1.79□□□□□ -2.7
CD74P04233 SNORD54-201ENST00000459159 67 ntBASIC-1.8□□□□□ -2.7
CD74P04233 MIR7110-201ENST00000612638 86 ntBASIC-1.8□□□□□ -2.7
CD74P04233 U7.4-201ENST00000614961 63 ntBASIC-1.8□□□□□ -2.7
CD74P04233 U2.22-201ENST00000636441 106 ntBASIC-1.8□□□□□ -2.7
CD74P04233 SNORD116.2-201ENST00000391251 93 ntBASIC-1.81□□□□□ -2.7
CD74P04233 RNU6-68P-201ENST00000516576 104 ntBASIC-1.81□□□□□ -2.7
CD74P04233 RNU7-160P-201ENST00000516660 62 ntBASIC-1.81□□□□□ -2.7
CD74P04233 MIR5582-201ENST00000579697 68 ntBASIC-1.81□□□□□ -2.7
CD74P04233 MIR466-201ENST00000580653 84 ntBASIC-1.81□□□□□ -2.7
CD74P04233 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.81□□□□□ -2.7
CD74P04233 SNORD113-3-201ENST00000364830 72 ntBASIC-1.82□□□□□ -2.7
CD74P04233 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.82□□□□□ -2.7
CD74P04233 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms