Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.36□□□□□ -2.79
MT-ND3P03897 RNU6-895P-201ENST00000384125 103 ntBASIC-2.37□□□□□ -2.79
MT-ND3P03897 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
MT-ND3P03897 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.38□□□□□ -2.79
MT-ND3P03897 MIR581-201ENST00000384895 96 ntBASIC-2.38□□□□□ -2.79
MT-ND3P03897 MIR5588-201ENST00000581890 63 ntBASIC-2.38□□□□□ -2.79
MT-ND3P03897 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.39□□□□□ -2.79
MT-ND3P03897 RNU6-789P-201ENST00000517105 102 ntBASIC-2.39□□□□□ -2.79
MT-ND3P03897 MIR202-201ENST00000362219 110 ntBASIC-2.4□□□□□ -2.79
MT-ND3P03897 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.4□□□□□ -2.79
MT-ND3P03897 RNU6-49P-201ENST00000384256 107 ntBASIC-2.4□□□□□ -2.79
MT-ND3P03897 MIR4712-201ENST00000583750 82 ntBASIC-2.4□□□□□ -2.79
MT-ND3P03897 IGLL4P-201ENST00000614590 133 ntBASIC-2.4□□□□□ -2.79
MT-ND3P03897 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNY1P1-201ENST00000364372 112 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNU6-32P-201ENST00000383948 107 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNU6-147P-201ENST00000383983 107 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNU6-13P-201ENST00000384248 107 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNU6-12P-201ENST00000384604 107 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNU6-41P-201ENST00000384741 107 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 MIR3134-201ENST00000579433 74 ntBASIC-2.41□□□□□ -2.8
MT-ND3P03897 RNU6-810P-201ENST00000364001 107 ntBASIC-2.42□□□□□ -2.8
MT-ND3P03897 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.42□□□□□ -2.8
MT-ND3P03897 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.42□□□□□ -2.8
MT-ND3P03897 RNU6-520P-201ENST00000384717 104 ntBASIC-2.42□□□□□ -2.8
MT-ND3P03897 RNU6-313P-201ENST00000516317 112 ntBASIC-2.42□□□□□ -2.8
MT-ND3P03897 RNU6-979P-201ENST00000383896 107 ntBASIC-2.43□□□□□ -2.8
MT-ND3P03897 RNU6-649P-201ENST00000384463 107 ntBASIC-2.43□□□□□ -2.8
MT-ND3P03897 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.43□□□□□ -2.8
MT-ND3P03897 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.43□□□□□ -2.8
MT-ND3P03897 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.44□□□□□ -2.8
MT-ND3P03897 RNU6-92P-201ENST00000605893 104 ntBASIC-2.44□□□□□ -2.8
MT-ND3P03897 MIR548AI-201ENST00000579940 88 ntBASIC-2.45□□□□□ -2.8
MT-ND3P03897 SNORD60.1-201ENST00000362451 73 ntBASIC-2.46□□□□□ -2.8
MT-ND3P03897 SNORD116.2-201ENST00000391251 93 ntBASIC-2.46□□□□□ -2.8
MT-ND3P03897 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.46□□□□□ -2.8
MT-ND3P03897 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.47□□□□□ -2.8
MT-ND3P03897 MT-TR-201ENST00000387439 65 ntBASIC-2.47□□□□□ -2.8
MT-ND3P03897 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 RNU6-119P-201ENST00000364882 107 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 snosnR66.1-201ENST00000391095 99 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 RNU6-231P-201ENST00000517122 103 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 MIR7110-201ENST00000612638 86 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 MIR1245B-201ENST00000636115 69 ntBASIC-2.48□□□□□ -2.81
MT-ND3P03897 SNORD18C-201ENST00000362704 69 ntBASIC-2.49□□□□□ -2.81
MT-ND3P03897 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.49□□□□□ -2.81
MT-ND3P03897 RNU6-542P-201ENST00000516405 103 ntBASIC-2.49□□□□□ -2.81
MT-ND3P03897 RNU6-687P-201ENST00000516443 89 ntBASIC-2.49□□□□□ -2.81
MT-ND3P03897 RNU6-194P-201ENST00000363862 105 ntBASIC-2.5□□□□□ -2.81
MT-ND3P03897 RNU6-118P-201ENST00000516552 102 ntBASIC-2.5□□□□□ -2.81
MT-ND3P03897 RNU6-828P-201ENST00000364876 107 ntBASIC-2.51□□□□□ -2.81
MT-ND3P03897 MIR494-201ENST00000349529 81 ntBASIC-2.52□□□□□ -2.81
MT-ND3P03897 RNA5SP405-201ENST00000363059 114 ntBASIC-2.52□□□□□ -2.81
MT-ND3P03897 RNU7-160P-201ENST00000516660 62 ntBASIC-2.52□□□□□ -2.81
MT-ND3P03897 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.52□□□□□ -2.81
MT-ND3P03897 RNU7-171P-201ENST00000459581 62 ntBASIC-2.53□□□□□ -2.81
MT-ND3P03897 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.53□□□□□ -2.81
MT-ND3P03897 SNORD60-201ENST00000383903 83 ntBASIC-2.54□□□□□ -2.82
MT-ND3P03897 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.55□□□□□ -2.82
MT-ND3P03897 RNU6-530P-201ENST00000391180 107 ntBASIC-2.55□□□□□ -2.82
MT-ND3P03897 MIR548M-201ENST00000408260 86 ntBASIC-2.56□□□□□ -2.82
MT-ND3P03897 MIR548N-201ENST00000408742 75 ntBASIC-2.56□□□□□ -2.82
MT-ND3P03897 SNORA17.4-201ENST00000391287 132 ntBASIC-2.57□□□□□ -2.82
MT-ND3P03897 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.57□□□□□ -2.82
MT-ND3P03897 SNORD20-201ENST00000384550 80 ntBASIC-2.58□□□□□ -2.82
MT-ND3P03897 RNA5SP89-201ENST00000410300 108 ntBASIC-2.59□□□□□ -2.82
MT-ND3P03897 SNORA40.16-201ENST00000517238 121 ntBASIC-2.59□□□□□ -2.82
MT-ND3P03897 MIR3910-1-201ENST00000580936 111 ntBASIC-2.59□□□□□ -2.82
MT-ND3P03897 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.6□□□□□ -2.83
MT-ND3P03897 SNORA40B-201ENST00000385573 128 ntBASIC-2.6□□□□□ -2.83
MT-ND3P03897 AC097484.2-201ENST00000509147 251 ntBASIC-2.6□□□□□ -2.83
MT-ND3P03897 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.61□□□□□ -2.83
MT-ND3P03897 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.61□□□□□ -2.83
MT-ND3P03897 RNY4P30-201ENST00000410216 95 ntBASIC-2.61□□□□□ -2.83
MT-ND3P03897 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.61□□□□□ -2.83
MT-ND3P03897 MIR3668-201ENST00000582138 75 ntBASIC-2.61□□□□□ -2.83
MT-ND3P03897 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.62□□□□□ -2.83
MT-ND3P03897 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.62□□□□□ -2.83
MT-ND3P03897 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.62□□□□□ -2.83
MT-ND3P03897 RNU6-215P-201ENST00000365169 102 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 RNU6-787P-201ENST00000384032 107 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.63□□□□□ -2.83
MT-ND3P03897 MIR3139-201ENST00000579145 76 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.63□□□□□ -2.83
MT-ND3P03897 RNU6-361P-201ENST00000364454 107 ntBASIC-2.64□□□□□ -2.83
MT-ND3P03897 SNORD113-3-201ENST00000364830 72 ntBASIC-2.64□□□□□ -2.83
MT-ND3P03897 RNU6-44P-201ENST00000384045 107 ntBASIC-2.64□□□□□ -2.83
MT-ND3P03897 MIR466-201ENST00000580653 84 ntBASIC-2.64□□□□□ -2.83
MT-ND3P03897 RNU6-912P-201ENST00000363800 104 ntBASIC-2.65□□□□□ -2.83
MT-ND3P03897 RNU6-411P-201ENST00000384451 107 ntBASIC-2.65□□□□□ -2.83
MT-ND3P03897 FTX_4.1-201ENST00000616291 147 ntBASIC-2.65□□□□□ -2.83
MT-ND3P03897 SNORA25.5-201ENST00000363782 126 ntBASIC-2.66□□□□□ -2.84
MT-ND3P03897 RNU6-663P-201ENST00000391105 106 ntBASIC-2.66□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms