Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORD116-19-201ENST00000384729 92 ntBASIC-3.85□□□□□ -3.03
APOEP02649 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.85□□□□□ -3.03
APOEP02649 RNU6-755P-201ENST00000364400 103 ntBASIC-3.86□□□□□ -3.03
APOEP02649 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.86□□□□□ -3.03
APOEP02649 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.86□□□□□ -3.03
APOEP02649 AP001318.4-201ENST00000616637 121 ntBASIC-3.86□□□□□ -3.03
APOEP02649 MIR664A-201ENST00000626086 82 ntBASIC-3.86□□□□□ -3.03
APOEP02649 SNORD60-201ENST00000383903 83 ntBASIC-3.87□□□□□ -3.03
APOEP02649 MIR202-201ENST00000362219 110 ntBASIC-3.88□□□□□ -3.03
APOEP02649 RNU6-907P-201ENST00000390924 102 ntBASIC-3.88□□□□□ -3.03
APOEP02649 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.89□□□□□ -3.03
APOEP02649 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.89□□□□□ -3.03
APOEP02649 RNY4P25-201ENST00000459254 96 ntBASIC-3.89□□□□□ -3.03
APOEP02649 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.89□□□□□ -3.03
APOEP02649 RNU6-834P-201ENST00000362367 110 ntBASIC-3.9□□□□□ -3.03
APOEP02649 RNU6-649P-201ENST00000384463 107 ntBASIC-3.9□□□□□ -3.03
APOEP02649 MIR548N-201ENST00000408742 75 ntBASIC-3.9□□□□□ -3.03
APOEP02649 RNU6-803P-201ENST00000516034 102 ntBASIC-3.9□□□□□ -3.03
APOEP02649 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.91□□□□□ -3.04
APOEP02649 RNU6-380P-201ENST00000410207 107 ntBASIC-3.91□□□□□ -3.04
APOEP02649 MIR2052-201ENST00000636055 55 ntBASIC-3.91□□□□□ -3.04
APOEP02649 RNU6-463P-201ENST00000384340 107 ntBASIC-3.92□□□□□ -3.04
APOEP02649 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.94□□□□□ -3.04
APOEP02649 RNY1P5-201ENST00000383890 115 ntBASIC-3.94□□□□□ -3.04
APOEP02649 RNU6-789P-201ENST00000517105 102 ntBASIC-3.94□□□□□ -3.04
APOEP02649 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.94□□□□□ -3.04
APOEP02649 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.95□□□□□ -3.04
APOEP02649 RNU7-160P-201ENST00000516660 62 ntBASIC-3.95□□□□□ -3.04
APOEP02649 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.96□□□□□ -3.04
APOEP02649 RNU6-912P-201ENST00000363800 104 ntBASIC-3.97□□□□□ -3.04
APOEP02649 RNU6-828P-201ENST00000364876 107 ntBASIC-3.97□□□□□ -3.04
APOEP02649 AL117351.2-201ENST00000513571 157 ntBASIC-3.97□□□□□ -3.04
APOEP02649 AL731768.1-201ENST00000603124 139 ntBASIC-3.97□□□□□ -3.04
APOEP02649 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.97□□□□□ -3.04
APOEP02649 RNU6-255P-201ENST00000516957 105 ntBASIC-3.98□□□□□ -3.05
APOEP02649 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.99□□□□□ -3.05
APOEP02649 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.99□□□□□ -3.05
APOEP02649 RNU6-530P-201ENST00000391180 107 ntBASIC-4□□□□□ -3.05
APOEP02649 SNORA17.4-201ENST00000391287 132 ntBASIC-4□□□□□ -3.05
APOEP02649 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4□□□□□ -3.05
APOEP02649 AC006160.2-201ENST00000637708 154 ntBASIC-4□□□□□ -3.05
APOEP02649 SNORD116-24-201ENST00000384549 92 ntBASIC-4.01□□□□□ -3.05
APOEP02649 MT-TG-201ENST00000387429 68 ntBASIC-4.01□□□□□ -3.05
APOEP02649 MALAT1.1-201ENST00000618249 95 ntBASIC-4.01□□□□□ -3.05
APOEP02649 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.02□□□□□ -3.05
APOEP02649 MIR7110-201ENST00000612638 86 ntBASIC-4.04□□□□□ -3.06
APOEP02649 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.05□□□□□ -3.06
APOEP02649 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.05□□□□□ -3.06
APOEP02649 RNU6-68P-201ENST00000516576 104 ntBASIC-4.05□□□□□ -3.06
APOEP02649 RNU6-810P-201ENST00000364001 107 ntBASIC-4.06□□□□□ -3.06
APOEP02649 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.06□□□□□ -3.06
APOEP02649 RNU6-895P-201ENST00000384125 103 ntBASIC-4.06□□□□□ -3.06
APOEP02649 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.06□□□□□ -3.06
APOEP02649 RNU6-92P-201ENST00000605893 104 ntBASIC-4.06□□□□□ -3.06
APOEP02649 RNU6-361P-201ENST00000364454 107 ntBASIC-4.07□□□□□ -3.06
APOEP02649 MIR379-201ENST00000362218 67 ntBASIC-4.08□□□□□ -3.06
APOEP02649 MIR1254-1-201ENST00000408257 97 ntBASIC-4.08□□□□□ -3.06
APOEP02649 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.09□□□□□ -3.06
APOEP02649 MIR154-201ENST00000385243 84 ntBASIC-4.1□□□□□ -3.07
APOEP02649 RNU6-589P-201ENST00000516485 107 ntBASIC-4.1□□□□□ -3.07
APOEP02649 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.1□□□□□ -3.07
APOEP02649 RNU6-315P-201ENST00000362666 107 ntBASIC-4.11□□□□□ -3.07
APOEP02649 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.11□□□□□ -3.07
APOEP02649 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.11□□□□□ -3.07
APOEP02649 RNU6-542P-201ENST00000516405 103 ntBASIC-4.11□□□□□ -3.07
APOEP02649 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.12□□□□□ -3.07
APOEP02649 RNU6-675P-201ENST00000384236 104 ntBASIC-4.12□□□□□ -3.07
APOEP02649 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.12□□□□□ -3.07
APOEP02649 MIR548AI-201ENST00000579940 88 ntBASIC-4.12□□□□□ -3.07
APOEP02649 MIR450A1-201ENST00000362262 91 ntBASIC-4.13□□□□□ -3.07
APOEP02649 AL031737.1-201ENST00000450125 223 ntBASIC-4.13□□□□□ -3.07
APOEP02649 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.13□□□□□ -3.07
APOEP02649 SNORA40.13-201ENST00000516379 120 ntBASIC-4.13□□□□□ -3.07
APOEP02649 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.13□□□□□ -3.07
APOEP02649 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.13□□□□□ -3.07
APOEP02649 RNU6-231P-201ENST00000517122 103 ntBASIC-4.13□□□□□ -3.07
APOEP02649 RNU6-1011P-201ENST00000384668 107 ntBASIC-4.14□□□□□ -3.07
APOEP02649 MIR509-1-201ENST00000385265 94 ntBASIC-4.14□□□□□ -3.07
APOEP02649 MIR509-2-201ENST00000390724 91 ntBASIC-4.14□□□□□ -3.07
APOEP02649 SNORD116.2-201ENST00000391251 93 ntBASIC-4.14□□□□□ -3.07
APOEP02649 SNORD60.1-201ENST00000362451 73 ntBASIC-4.15□□□□□ -3.07
APOEP02649 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.15□□□□□ -3.07
APOEP02649 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.15□□□□□ -3.07
APOEP02649 RNU6-70P-201ENST00000516438 60 ntBASIC-4.15□□□□□ -3.07
APOEP02649 AP001094.1-201ENST00000579805 193 ntBASIC-4.15□□□□□ -3.07
APOEP02649 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.16□□□□□ -3.08
APOEP02649 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.16□□□□□ -3.08
APOEP02649 RNU6-800P-201ENST00000384473 103 ntBASIC-4.18□□□□□ -3.08
APOEP02649 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.2□□□□□ -3.08
APOEP02649 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.2□□□□□ -3.08
APOEP02649 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.2□□□□□ -3.08
APOEP02649 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.22□□□□□ -3.08
APOEP02649 AL359920.1-201ENST00000618332 176 ntBASIC-4.22□□□□□ -3.08
APOEP02649 MIR4426-201ENST00000640330 63 ntBASIC-4.22□□□□□ -3.08
APOEP02649 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.23□□□□□ -3.09
APOEP02649 AC008267.6-201ENST00000441664 139 ntBASIC-4.23□□□□□ -3.09
APOEP02649 RNU6-844P-201ENST00000517175 102 ntBASIC-4.23□□□□□ -3.09
APOEP02649 SNORD114-13-201ENST00000364377 74 ntBASIC-4.24□□□□□ -3.09
APOEP02649 MIR488-201ENST00000365739 83 ntBASIC-4.24□□□□□ -3.09
APOEP02649 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.24□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms