Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNORD18.1-201ENST00000363807 70 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 RNU6-411P-201ENST00000384451 107 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 U7.4-201ENST00000614961 63 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 MIR6874-201ENST00000635894 71 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 MIR29B1-201ENST00000385015 81 ntBASIC-1.42□□□□□ -2.64
PDGFBP01127 MIR579-201ENST00000385221 98 ntBASIC-1.42□□□□□ -2.64
PDGFBP01127 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.42□□□□□ -2.64
PDGFBP01127 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNA5SP93-201ENST00000362525 114 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNU6-228P-201ENST00000362700 106 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNU6-247P-201ENST00000362636 107 ntBASIC-1.44□□□□□ -2.64
PDGFBP01127 SNORD1B-201ENST00000363091 84 ntBASIC-1.44□□□□□ -2.64
PDGFBP01127 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
PDGFBP01127 RNU6-164P-201ENST00000364604 103 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 MIR548AA1-201ENST00000384971 97 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 AC091912.2-201ENST00000624798 167 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 SNORA26.2-201ENST00000390922 122 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 RNU6-608P-201ENST00000383927 104 ntBASIC-1.47□□□□□ -2.64
PDGFBP01127 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
PDGFBP01127 RNU6-995P-201ENST00000391244 107 ntBASIC-1.47□□□□□ -2.64
PDGFBP01127 MIR3170-201ENST00000582699 77 ntBASIC-1.47□□□□□ -2.64
PDGFBP01127 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.47□□□□□ -2.64
PDGFBP01127 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 MIR1255A-201ENST00000408338 113 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 RNY4P29-201ENST00000410801 97 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 RNU6-172P-201ENST00000411000 93 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 MIR487B-201ENST00000385021 84 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 RNU6-542P-201ENST00000516405 103 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 RNU7-151P-201ENST00000516930 53 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 RNA5SP86-201ENST00000390869 98 ntBASIC-1.5□□□□□ -2.65
PDGFBP01127 RNU6-663P-201ENST00000391105 106 ntBASIC-1.5□□□□□ -2.65
PDGFBP01127 AC018880.2-201ENST00000414265 201 ntBASIC-1.5□□□□□ -2.65
PDGFBP01127 RNU6-92P-201ENST00000605893 104 ntBASIC-1.51□□□□□ -2.65
PDGFBP01127 MIR3202-2-201ENST00000635980 79 ntBASIC-1.51□□□□□ -2.65
PDGFBP01127 SNORD30.1-201ENST00000391309 70 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 MIR548H1-201ENST00000408610 102 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 MIR6502-201ENST00000617296 76 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.53□□□□□ -2.65
PDGFBP01127 RNY4P7-201ENST00000364600 96 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 RNU6-634P-201ENST00000459134 106 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 MIR3139-201ENST00000579145 76 ntBASIC-1.55□□□□□ -2.66
PDGFBP01127 RNU6-857P-201ENST00000515893 110 ntBASIC-1.56□□□□□ -2.66
PDGFBP01127 SNORD63.2-201ENST00000516303 64 ntBASIC-1.56□□□□□ -2.66
PDGFBP01127 RNU6-258P-201ENST00000390884 101 ntBASIC-1.57□□□□□ -2.66
PDGFBP01127 MIR4756-201ENST00000577874 78 ntBASIC-1.57□□□□□ -2.66
PDGFBP01127 SNORD60.1-201ENST00000362451 73 ntBASIC-1.58□□□□□ -2.66
PDGFBP01127 RNA5SP225-201ENST00000410874 135 ntBASIC-1.58□□□□□ -2.66
PDGFBP01127 RNU6-980P-201ENST00000516925 103 ntBASIC-1.58□□□□□ -2.66
PDGFBP01127 SNORD54-201ENST00000459159 67 ntBASIC-1.59□□□□□ -2.66
PDGFBP01127 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.59□□□□□ -2.66
PDGFBP01127 MT-TM-201ENST00000387377 68 ntBASIC-1.6□□□□□ -2.67
PDGFBP01127 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 RNU6-669P-201ENST00000365575 107 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 SNORD116.2-201ENST00000391251 93 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 AC108019.1-201ENST00000512540 175 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 MIR7978-201ENST00000636158 59 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.62□□□□□ -2.67
PDGFBP01127 AC120024.2-201ENST00000576526 175 ntBASIC-1.62□□□□□ -2.67
PDGFBP01127 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.63□□□□□ -2.67
PDGFBP01127 SNORD78.1-201ENST00000390866 65 ntBASIC-1.63□□□□□ -2.67
PDGFBP01127 RNU6-871P-201ENST00000516122 100 ntBASIC-1.63□□□□□ -2.67
PDGFBP01127 RNU6-649P-201ENST00000384463 107 ntBASIC-1.64□□□□□ -2.67
PDGFBP01127 RNU6-523P-201ENST00000516304 54 ntBASIC-1.64□□□□□ -2.67
PDGFBP01127 MIR7110-201ENST00000612638 86 ntBASIC-1.64□□□□□ -2.67
PDGFBP01127 RNU6-563P-201ENST00000364872 108 ntBASIC-1.65□□□□□ -2.67
PDGFBP01127 RNU6-974P-201ENST00000384099 108 ntBASIC-1.65□□□□□ -2.67
PDGFBP01127 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.65□□□□□ -2.67
PDGFBP01127 SNORA25.4-201ENST00000363666 124 ntBASIC-1.66□□□□□ -2.68
PDGFBP01127 RNU6-810P-201ENST00000364001 107 ntBASIC-1.66□□□□□ -2.68
PDGFBP01127 RNU6-279P-201ENST00000391297 101 ntBASIC-1.66□□□□□ -2.68
PDGFBP01127 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 SNORA25.5-201ENST00000363782 126 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 RNU6-231P-201ENST00000517122 103 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 MIR23C-201ENST00000579846 100 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.68□□□□□ -2.68
PDGFBP01127 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.68□□□□□ -2.68
PDGFBP01127 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.69□□□□□ -2.68
PDGFBP01127 RNY4-201ENST00000516507 96 ntBASIC-1.69□□□□□ -2.68
PDGFBP01127 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.69□□□□□ -2.68
PDGFBP01127 RNU6-79P-201ENST00000362511 107 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 AC005520.4-201ENST00000604337 90 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 U6.111-201ENST00000636093 83 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 U6.97-201ENST00000636904 101 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 MIR4679-1-201ENST00000637619 75 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms