Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 U2.18-201ENST00000622185 84 ntBASIC-1.79□□□□□ -2.7
DDX58O95786 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.79□□□□□ -2.7
DDX58O95786 AC120024.2-201ENST00000576526 175 ntBASIC-1.8□□□□□ -2.7
DDX58O95786 AC062037.1-201ENST00000605302 128 ntBASIC-1.8□□□□□ -2.7
DDX58O95786 SNORD116-16-201ENST00000384533 92 ntBASIC-1.81□□□□□ -2.7
DDX58O95786 MIR23C-201ENST00000579846 100 ntBASIC-1.81□□□□□ -2.7
DDX58O95786 MIR3123-201ENST00000583417 75 ntBASIC-1.81□□□□□ -2.7
DDX58O95786 RNU6-258P-201ENST00000390884 101 ntBASIC-1.82□□□□□ -2.7
DDX58O95786 MIR4756-201ENST00000577874 78 ntBASIC-1.82□□□□□ -2.7
DDX58O95786 MIR3170-201ENST00000582699 77 ntBASIC-1.82□□□□□ -2.7
DDX58O95786 SNORD115-31-201ENST00000365318 82 ntBASIC-1.83□□□□□ -2.7
DDX58O95786 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.83□□□□□ -2.7
DDX58O95786 RNU6-841P-201ENST00000383872 107 ntBASIC-1.84□□□□□ -2.7
DDX58O95786 RNU6-787P-201ENST00000384032 107 ntBASIC-1.84□□□□□ -2.7
DDX58O95786 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.84□□□□□ -2.7
DDX58O95786 SNORD116-24-201ENST00000384549 92 ntBASIC-1.84□□□□□ -2.7
DDX58O95786 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.84□□□□□ -2.7
DDX58O95786 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.84□□□□□ -2.7
DDX58O95786 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.85□□□□□ -2.71
DDX58O95786 RNU6-411P-201ENST00000384451 107 ntBASIC-1.85□□□□□ -2.71
DDX58O95786 RNA5SP170-201ENST00000517150 101 ntBASIC-1.85□□□□□ -2.71
DDX58O95786 MIR548AM-201ENST00000584298 74 ntBASIC-1.85□□□□□ -2.71
DDX58O95786 SNORA41B-201ENST00000384785 128 ntBASIC-1.86□□□□□ -2.71
DDX58O95786 MIR548AA1-201ENST00000384971 97 ntBASIC-1.86□□□□□ -2.71
DDX58O95786 U7.4-201ENST00000614961 63 ntBASIC-1.86□□□□□ -2.71
DDX58O95786 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.87□□□□□ -2.71
DDX58O95786 RNU6-687P-201ENST00000516443 89 ntBASIC-1.87□□□□□ -2.71
DDX58O95786 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.87□□□□□ -2.71
DDX58O95786 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.87□□□□□ -2.71
DDX58O95786 MIR664B-201ENST00000626756 61 ntBASIC-1.87□□□□□ -2.71
DDX58O95786 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.88□□□□□ -2.71
DDX58O95786 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.89□□□□□ -2.71
DDX58O95786 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.89□□□□□ -2.71
DDX58O95786 RNU6-542P-201ENST00000516405 103 ntBASIC-1.9□□□□□ -2.71
DDX58O95786 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.91□□□□□ -2.72
DDX58O95786 RNU6-995P-201ENST00000391244 107 ntBASIC-1.92□□□□□ -2.72
DDX58O95786 AC013734.1-201ENST00000619329 111 ntBASIC-1.92□□□□□ -2.72
DDX58O95786 SNORD1B-201ENST00000363091 84 ntBASIC-1.93□□□□□ -2.72
DDX58O95786 SNORD73B-201ENST00000364394 72 ntBASIC-1.93□□□□□ -2.72
DDX58O95786 AC005520.4-201ENST00000604337 90 ntBASIC-1.93□□□□□ -2.72
DDX58O95786 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.93□□□□□ -2.72
DDX58O95786 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.94□□□□□ -2.72
DDX58O95786 RNU4-88P-201ENST00000411220 86 ntBASIC-1.94□□□□□ -2.72
DDX58O95786 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.94□□□□□ -2.72
DDX58O95786 RNU6-247P-201ENST00000362636 107 ntBASIC-1.95□□□□□ -2.72
DDX58O95786 RNY4P27-201ENST00000363341 96 ntBASIC-1.95□□□□□ -2.72
DDX58O95786 RNU6-980P-201ENST00000516925 103 ntBASIC-1.95□□□□□ -2.72
DDX58O95786 MIR3202-2-201ENST00000635980 79 ntBASIC-1.95□□□□□ -2.72
DDX58O95786 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.96□□□□□ -2.72
DDX58O95786 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.96□□□□□ -2.72
DDX58O95786 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.97□□□□□ -2.72
DDX58O95786 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.98□□□□□ -2.73
DDX58O95786 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.98□□□□□ -2.73
DDX58O95786 SNORA26.2-201ENST00000390922 122 ntBASIC-1.98□□□□□ -2.73
DDX58O95786 RNU6-92P-201ENST00000605893 104 ntBASIC-1.98□□□□□ -2.73
DDX58O95786 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.98□□□□□ -2.73
DDX58O95786 SNORA27.2-201ENST00000363365 126 ntBASIC-1.99□□□□□ -2.73
DDX58O95786 RNU6-573P-201ENST00000383938 106 ntBASIC-1.99□□□□□ -2.73
DDX58O95786 RNU7-151P-201ENST00000516930 53 ntBASIC-1.99□□□□□ -2.73
DDX58O95786 MIR548W-201ENST00000581970 74 ntBASIC-1.99□□□□□ -2.73
DDX58O95786 MIR7978-201ENST00000636158 59 ntBASIC-1.99□□□□□ -2.73
DDX58O95786 Y_RNA.211-201ENST00000364164 101 ntBASIC-2□□□□□ -2.73
DDX58O95786 RNU6-669P-201ENST00000365575 107 ntBASIC-2□□□□□ -2.73
DDX58O95786 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.01□□□□□ -2.73
DDX58O95786 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.01□□□□□ -2.73
DDX58O95786 MIR125B1-201ENST00000385236 88 ntBASIC-2.01□□□□□ -2.73
DDX58O95786 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
DDX58O95786 RNU6-172P-201ENST00000411000 93 ntBASIC-2.01□□□□□ -2.73
DDX58O95786 MIR579-201ENST00000385221 98 ntBASIC-2.02□□□□□ -2.73
DDX58O95786 RNU6-663P-201ENST00000391105 106 ntBASIC-2.02□□□□□ -2.73
DDX58O95786 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.02□□□□□ -2.73
DDX58O95786 SNORD63.2-201ENST00000516303 64 ntBASIC-2.02□□□□□ -2.73
DDX58O95786 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.03□□□□□ -2.73
DDX58O95786 RNY4P29-201ENST00000410801 97 ntBASIC-2.03□□□□□ -2.73
DDX58O95786 RNY3P8-201ENST00000411366 126 ntBASIC-2.03□□□□□ -2.73
DDX58O95786 RNU6-634P-201ENST00000459134 106 ntBASIC-2.03□□□□□ -2.73
DDX58O95786 snoU13.10-201ENST00000459301 103 ntBASIC-2.03□□□□□ -2.73
DDX58O95786 U6.97-201ENST00000636904 101 ntBASIC-2.03□□□□□ -2.73
DDX58O95786 RNA5SP405-201ENST00000363059 114 ntBASIC-2.04□□□□□ -2.74
DDX58O95786 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.04□□□□□ -2.74
DDX58O95786 RNU6-974P-201ENST00000384099 108 ntBASIC-2.04□□□□□ -2.74
DDX58O95786 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.04□□□□□ -2.74
DDX58O95786 RNU6-523P-201ENST00000516304 54 ntBASIC-2.04□□□□□ -2.74
DDX58O95786 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.05□□□□□ -2.74
DDX58O95786 MIR1255A-201ENST00000408338 113 ntBASIC-2.06□□□□□ -2.74
DDX58O95786 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.06□□□□□ -2.74
DDX58O95786 MIR581-201ENST00000384895 96 ntBASIC-2.08□□□□□ -2.74
DDX58O95786 SNORD30.1-201ENST00000391309 70 ntBASIC-2.08□□□□□ -2.74
DDX58O95786 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.09□□□□□ -2.74
DDX58O95786 RNU6-871P-201ENST00000516122 100 ntBASIC-2.09□□□□□ -2.74
DDX58O95786 RNU6-194P-201ENST00000363862 105 ntBASIC-2.1□□□□□ -2.75
DDX58O95786 RNU6-857P-201ENST00000515893 110 ntBASIC-2.1□□□□□ -2.75
DDX58O95786 RNU6-118P-201ENST00000516552 102 ntBASIC-2.11□□□□□ -2.75
DDX58O95786 SNORD60.1-201ENST00000362451 73 ntBASIC-2.12□□□□□ -2.75
DDX58O95786 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.12□□□□□ -2.75
DDX58O95786 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.12□□□□□ -2.75
DDX58O95786 RNU7-160P-201ENST00000516660 62 ntBASIC-2.12□□□□□ -2.75
DDX58O95786 MIR4748-201ENST00000578076 82 ntBASIC-2.12□□□□□ -2.75
DDX58O95786 SNORD18C-201ENST00000362704 69 ntBASIC-2.13□□□□□ -2.75
DDX58O95786 MIR3139-201ENST00000579145 76 ntBASIC-2.13□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms