Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2□□□□□ -2.73
SEMA3DO95025 RNU6-841P-201ENST00000383872 107 ntBASIC-2.01□□□□□ -2.73
SEMA3DO95025 RNU6-32P-201ENST00000383948 107 ntBASIC-2.01□□□□□ -2.73
SEMA3DO95025 RNU6-13P-201ENST00000384248 107 ntBASIC-2.01□□□□□ -2.73
SEMA3DO95025 RNU6-12P-201ENST00000384604 107 ntBASIC-2.01□□□□□ -2.73
SEMA3DO95025 RNU6-41P-201ENST00000384741 107 ntBASIC-2.01□□□□□ -2.73
SEMA3DO95025 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.01□□□□□ -2.73
SEMA3DO95025 SNORA63.4-201ENST00000362763 126 ntBASIC-2.02□□□□□ -2.73
SEMA3DO95025 RNU6-247P-201ENST00000362636 107 ntBASIC-2.03□□□□□ -2.73
SEMA3DO95025 SNORD1B-201ENST00000363091 84 ntBASIC-2.03□□□□□ -2.73
SEMA3DO95025 RNA5SP173-201ENST00000364857 136 ntBASIC-2.03□□□□□ -2.73
SEMA3DO95025 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.03□□□□□ -2.73
SEMA3DO95025 AC120024.2-201ENST00000576526 175 ntBASIC-2.03□□□□□ -2.73
SEMA3DO95025 RNU6-315P-201ENST00000362666 107 ntBASIC-2.04□□□□□ -2.74
SEMA3DO95025 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.04□□□□□ -2.74
SEMA3DO95025 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.04□□□□□ -2.74
SEMA3DO95025 SNORD115-31-201ENST00000365318 82 ntBASIC-2.04□□□□□ -2.74
SEMA3DO95025 MIR466-201ENST00000580653 84 ntBASIC-2.04□□□□□ -2.74
SEMA3DO95025 RNU6-563P-201ENST00000364872 108 ntBASIC-2.05□□□□□ -2.74
SEMA3DO95025 RNU6-147P-201ENST00000383983 107 ntBASIC-2.05□□□□□ -2.74
SEMA3DO95025 RNU6-258P-201ENST00000390884 101 ntBASIC-2.05□□□□□ -2.74
SEMA3DO95025 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.05□□□□□ -2.74
SEMA3DO95025 MIR4748-201ENST00000578076 82 ntBASIC-2.05□□□□□ -2.74
SEMA3DO95025 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.07□□□□□ -2.74
SEMA3DO95025 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.07□□□□□ -2.74
SEMA3DO95025 MIR3910-1-201ENST00000580936 111 ntBASIC-2.07□□□□□ -2.74
SEMA3DO95025 IGLL4P-201ENST00000614590 133 ntBASIC-2.07□□□□□ -2.74
SEMA3DO95025 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.08□□□□□ -2.74
SEMA3DO95025 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.08□□□□□ -2.74
SEMA3DO95025 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.08□□□□□ -2.74
SEMA3DO95025 RNY1P1-201ENST00000364372 112 ntBASIC-2.09□□□□□ -2.74
SEMA3DO95025 RNU6-995P-201ENST00000391244 107 ntBASIC-2.09□□□□□ -2.74
SEMA3DO95025 RNU7-151P-201ENST00000516930 53 ntBASIC-2.09□□□□□ -2.74
SEMA3DO95025 MIR5588-201ENST00000581890 63 ntBASIC-2.09□□□□□ -2.74
SEMA3DO95025 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.1□□□□□ -2.75
SEMA3DO95025 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.1□□□□□ -2.75
SEMA3DO95025 MIR579-201ENST00000385221 98 ntBASIC-2.1□□□□□ -2.75
SEMA3DO95025 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.12□□□□□ -2.75
SEMA3DO95025 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.12□□□□□ -2.75
SEMA3DO95025 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.12□□□□□ -2.75
SEMA3DO95025 RNU6-979P-201ENST00000383896 107 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 RNU6-49P-201ENST00000384256 107 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 SNORD116-24-201ENST00000384549 92 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 RNU6-172P-201ENST00000411000 93 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 RNU6-70P-201ENST00000516438 60 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 MIR548W-201ENST00000581970 74 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.13□□□□□ -2.75
SEMA3DO95025 RNU6-895P-201ENST00000384125 103 ntBASIC-2.14□□□□□ -2.75
SEMA3DO95025 MIR154-201ENST00000385243 84 ntBASIC-2.14□□□□□ -2.75
SEMA3DO95025 SNORD63.2-201ENST00000516303 64 ntBASIC-2.14□□□□□ -2.75
SEMA3DO95025 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.14□□□□□ -2.75
SEMA3DO95025 snoU13.10-201ENST00000459301 103 ntBASIC-2.15□□□□□ -2.75
SEMA3DO95025 RNU6-669P-201ENST00000365575 107 ntBASIC-2.16□□□□□ -2.76
SEMA3DO95025 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.16□□□□□ -2.76
SEMA3DO95025 MIR7978-201ENST00000636158 59 ntBASIC-2.16□□□□□ -2.76
SEMA3DO95025 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.17□□□□□ -2.76
SEMA3DO95025 SNORD20-201ENST00000384550 80 ntBASIC-2.17□□□□□ -2.76
SEMA3DO95025 MIR4712-201ENST00000583750 82 ntBASIC-2.17□□□□□ -2.76
SEMA3DO95025 FTX_4.1-201ENST00000616291 147 ntBASIC-2.17□□□□□ -2.76
SEMA3DO95025 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.18□□□□□ -2.76
SEMA3DO95025 SNORA27.2-201ENST00000363365 126 ntBASIC-2.18□□□□□ -2.76
SEMA3DO95025 RNU6-215P-201ENST00000365169 102 ntBASIC-2.18□□□□□ -2.76
SEMA3DO95025 SNORD113-1-201ENST00000365321 69 ntBASIC-2.18□□□□□ -2.76
SEMA3DO95025 RNU6-919P-201ENST00000516731 104 ntBASIC-2.19□□□□□ -2.76
SEMA3DO95025 MIR1245B-201ENST00000636115 69 ntBASIC-2.19□□□□□ -2.76
SEMA3DO95025 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 RNU6-141P-201ENST00000410499 105 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 AL606753.1-201ENST00000427435 87 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 RNU7-171P-201ENST00000459581 62 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 MIR5693-201ENST00000577722 73 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 AC013734.1-201ENST00000619329 111 ntBASIC-2.2□□□□□ -2.76
SEMA3DO95025 RNU6-789P-201ENST00000517105 102 ntBASIC-2.21□□□□□ -2.76
SEMA3DO95025 AC005520.4-201ENST00000604337 90 ntBASIC-2.21□□□□□ -2.76
SEMA3DO95025 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.21□□□□□ -2.76
SEMA3DO95025 RNY4P9-201ENST00000363194 97 ntBASIC-2.22□□□□□ -2.76
SEMA3DO95025 MIR125B1-201ENST00000385236 88 ntBASIC-2.22□□□□□ -2.76
SEMA3DO95025 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.22□□□□□ -2.76
SEMA3DO95025 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.23□□□□□ -2.77
SEMA3DO95025 U6.97-201ENST00000636904 101 ntBASIC-2.23□□□□□ -2.77
SEMA3DO95025 RNU6-974P-201ENST00000384099 108 ntBASIC-2.24□□□□□ -2.77
SEMA3DO95025 RNA5SP89-201ENST00000410300 108 ntBASIC-2.24□□□□□ -2.77
SEMA3DO95025 RNU6-523P-201ENST00000516304 54 ntBASIC-2.24□□□□□ -2.77
SEMA3DO95025 MIR3134-201ENST00000579433 74 ntBASIC-2.24□□□□□ -2.77
SEMA3DO95025 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.25□□□□□ -2.77
SEMA3DO95025 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.25□□□□□ -2.77
SEMA3DO95025 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.25□□□□□ -2.77
SEMA3DO95025 RNY3P8-201ENST00000411366 126 ntBASIC-2.25□□□□□ -2.77
SEMA3DO95025 RNU6-542P-201ENST00000516405 103 ntBASIC-2.25□□□□□ -2.77
SEMA3DO95025 RNA5SP106-201ENST00000517274 100 ntBASIC-2.25□□□□□ -2.77
SEMA3DO95025 RNU6-92P-201ENST00000605893 104 ntBASIC-2.25□□□□□ -2.77
SEMA3DO95025 RNU6-44P-201ENST00000384045 107 ntBASIC-2.26□□□□□ -2.77
SEMA3DO95025 MIR548AI-201ENST00000579940 88 ntBASIC-2.27□□□□□ -2.77
SEMA3DO95025 MIR494-201ENST00000349529 81 ntBASIC-2.28□□□□□ -2.77
SEMA3DO95025 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.28□□□□□ -2.77
SEMA3DO95025 MIR509-1-201ENST00000385265 94 ntBASIC-2.28□□□□□ -2.77
SEMA3DO95025 MIR509-2-201ENST00000390724 91 ntBASIC-2.28□□□□□ -2.77
SEMA3DO95025 RNY4P30-201ENST00000410216 95 ntBASIC-2.28□□□□□ -2.77
SEMA3DO95025 RNU6-687P-201ENST00000516443 89 ntBASIC-2.28□□□□□ -2.77
SEMA3DO95025 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms