Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.46□□□□□ -2.64
HCN1O60741 MIR520D-201ENST00000385002 87 ntBASIC-1.46□□□□□ -2.64
HCN1O60741 MIR450A2-201ENST00000385022 100 ntBASIC-1.46□□□□□ -2.64
HCN1O60741 RNU6-695P-201ENST00000391157 104 ntBASIC-1.46□□□□□ -2.64
HCN1O60741 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.46□□□□□ -2.64
HCN1O60741 U2.18-201ENST00000622185 84 ntBASIC-1.46□□□□□ -2.64
HCN1O60741 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.47□□□□□ -2.64
HCN1O60741 RNU6-895P-201ENST00000384125 103 ntBASIC-1.47□□□□□ -2.64
HCN1O60741 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.47□□□□□ -2.64
HCN1O60741 MIR3139-201ENST00000579145 76 ntBASIC-1.47□□□□□ -2.64
HCN1O60741 MIR548AM-201ENST00000584298 74 ntBASIC-1.47□□□□□ -2.64
HCN1O60741 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.48□□□□□ -2.65
HCN1O60741 RNU6-294P-201ENST00000364999 102 ntBASIC-1.48□□□□□ -2.65
HCN1O60741 MIR3123-201ENST00000583417 75 ntBASIC-1.48□□□□□ -2.65
HCN1O60741 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.49□□□□□ -2.65
HCN1O60741 SNORA41B-201ENST00000384785 128 ntBASIC-1.49□□□□□ -2.65
HCN1O60741 MIR4666B-201ENST00000578142 81 ntBASIC-1.49□□□□□ -2.65
HCN1O60741 SNORD115-31-201ENST00000365318 82 ntBASIC-1.5□□□□□ -2.65
HCN1O60741 SNORD116-24-201ENST00000384549 92 ntBASIC-1.5□□□□□ -2.65
HCN1O60741 MIR548AA1-201ENST00000384971 97 ntBASIC-1.5□□□□□ -2.65
HCN1O60741 AC120024.2-201ENST00000576526 175 ntBASIC-1.5□□□□□ -2.65
HCN1O60741 RNA5SP405-201ENST00000363059 114 ntBASIC-1.51□□□□□ -2.65
HCN1O60741 RNY4P27-201ENST00000363341 96 ntBASIC-1.52□□□□□ -2.65
HCN1O60741 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.52□□□□□ -2.65
HCN1O60741 SNORD1B-201ENST00000363091 84 ntBASIC-1.53□□□□□ -2.65
HCN1O60741 RNU6-194P-201ENST00000363862 105 ntBASIC-1.53□□□□□ -2.65
HCN1O60741 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.53□□□□□ -2.65
HCN1O60741 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.53□□□□□ -2.65
HCN1O60741 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.53□□□□□ -2.65
HCN1O60741 RNU6-841P-201ENST00000383872 107 ntBASIC-1.54□□□□□ -2.66
HCN1O60741 MT-TM-201ENST00000387377 68 ntBASIC-1.54□□□□□ -2.66
HCN1O60741 RNU6-258P-201ENST00000390884 101 ntBASIC-1.54□□□□□ -2.66
HCN1O60741 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.54□□□□□ -2.66
HCN1O60741 MIR3134-201ENST00000579433 74 ntBASIC-1.54□□□□□ -2.66
HCN1O60741 MIR3170-201ENST00000582699 77 ntBASIC-1.54□□□□□ -2.66
HCN1O60741 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.54□□□□□ -2.66
HCN1O60741 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.55□□□□□ -2.66
HCN1O60741 RNU6-820P-201ENST00000384273 107 ntBASIC-1.55□□□□□ -2.66
HCN1O60741 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.55□□□□□ -2.66
HCN1O60741 MIR496-201ENST00000385226 102 ntBASIC-1.55□□□□□ -2.66
HCN1O60741 MIR23C-201ENST00000579846 100 ntBASIC-1.55□□□□□ -2.66
HCN1O60741 RNU6-687P-201ENST00000516443 89 ntBASIC-1.56□□□□□ -2.66
HCN1O60741 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.56□□□□□ -2.66
HCN1O60741 MIR5582-201ENST00000579697 68 ntBASIC-1.56□□□□□ -2.66
HCN1O60741 MIR548W-201ENST00000581970 74 ntBASIC-1.57□□□□□ -2.66
HCN1O60741 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.57□□□□□ -2.66
HCN1O60741 RNU6-787P-201ENST00000384032 107 ntBASIC-1.58□□□□□ -2.66
HCN1O60741 RNU6-995P-201ENST00000391244 107 ntBASIC-1.58□□□□□ -2.66
HCN1O60741 snoU13.10-201ENST00000459301 103 ntBASIC-1.58□□□□□ -2.66
HCN1O60741 RNU6-542P-201ENST00000516405 103 ntBASIC-1.58□□□□□ -2.66
HCN1O60741 AC013734.1-201ENST00000619329 111 ntBASIC-1.58□□□□□ -2.66
HCN1O60741 RNU6-247P-201ENST00000362636 107 ntBASIC-1.59□□□□□ -2.66
HCN1O60741 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.59□□□□□ -2.66
HCN1O60741 RNU6-411P-201ENST00000384451 107 ntBASIC-1.59□□□□□ -2.66
HCN1O60741 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.61□□□□□ -2.67
HCN1O60741 U6.97-201ENST00000636904 101 ntBASIC-1.61□□□□□ -2.67
HCN1O60741 RNU7-151P-201ENST00000516930 53 ntBASIC-1.62□□□□□ -2.67
HCN1O60741 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.62□□□□□ -2.67
HCN1O60741 RNU6-92P-201ENST00000605893 104 ntBASIC-1.62□□□□□ -2.67
HCN1O60741 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.62□□□□□ -2.67
HCN1O60741 RNU6-172P-201ENST00000411000 93 ntBASIC-1.63□□□□□ -2.67
HCN1O60741 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.63□□□□□ -2.67
HCN1O60741 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.63□□□□□ -2.67
HCN1O60741 AC062037.1-201ENST00000605302 128 ntBASIC-1.63□□□□□ -2.67
HCN1O60741 U7.4-201ENST00000614961 63 ntBASIC-1.63□□□□□ -2.67
HCN1O60741 RNU6-119P-201ENST00000364882 107 ntBASIC-1.64□□□□□ -2.67
HCN1O60741 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.64□□□□□ -2.67
HCN1O60741 AC005520.4-201ENST00000604337 90 ntBASIC-1.64□□□□□ -2.67
HCN1O60741 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.65□□□□□ -2.67
HCN1O60741 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.65□□□□□ -2.67
HCN1O60741 MIR579-201ENST00000385221 98 ntBASIC-1.66□□□□□ -2.68
HCN1O60741 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
HCN1O60741 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.66□□□□□ -2.68
HCN1O60741 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
HCN1O60741 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.67□□□□□ -2.68
HCN1O60741 MIR7978-201ENST00000636158 59 ntBASIC-1.67□□□□□ -2.68
HCN1O60741 RNU6-634P-201ENST00000459134 106 ntBASIC-1.68□□□□□ -2.68
HCN1O60741 MIR4748-201ENST00000578076 82 ntBASIC-1.68□□□□□ -2.68
HCN1O60741 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.68□□□□□ -2.68
HCN1O60741 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.68□□□□□ -2.68
HCN1O60741 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.68□□□□□ -2.68
HCN1O60741 SNORA27.2-201ENST00000363365 126 ntBASIC-1.69□□□□□ -2.68
HCN1O60741 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.69□□□□□ -2.68
HCN1O60741 SNORD63.2-201ENST00000516303 64 ntBASIC-1.69□□□□□ -2.68
HCN1O60741 RNA5SP93-201ENST00000362525 114 ntBASIC-1.7□□□□□ -2.68
HCN1O60741 RNU6-669P-201ENST00000365575 107 ntBASIC-1.7□□□□□ -2.68
HCN1O60741 MIR125B1-201ENST00000385236 88 ntBASIC-1.7□□□□□ -2.68
HCN1O60741 MIR466-201ENST00000580653 84 ntBASIC-1.7□□□□□ -2.68
HCN1O60741 MIR3202-2-201ENST00000635980 79 ntBASIC-1.7□□□□□ -2.68
HCN1O60741 SNORD60.1-201ENST00000362451 73 ntBASIC-1.71□□□□□ -2.68
HCN1O60741 RNU6-663P-201ENST00000391105 106 ntBASIC-1.71□□□□□ -2.68
HCN1O60741 RNY3P8-201ENST00000411366 126 ntBASIC-1.72□□□□□ -2.68
HCN1O60741 MIR581-201ENST00000384895 96 ntBASIC-1.73□□□□□ -2.69
HCN1O60741 RNU7-160P-201ENST00000516660 62 ntBASIC-1.73□□□□□ -2.69
HCN1O60741 RNU6-974P-201ENST00000384099 108 ntBASIC-1.74□□□□□ -2.69
HCN1O60741 RNA5SP170-201ENST00000517150 101 ntBASIC-1.74□□□□□ -2.69
HCN1O60741 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.75□□□□□ -2.69
HCN1O60741 RNU6-141P-201ENST00000410499 105 ntBASIC-1.75□□□□□ -2.69
HCN1O60741 RNU6-523P-201ENST00000516304 54 ntBASIC-1.75□□□□□ -2.69
HCN1O60741 MIR7110-201ENST00000612638 86 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms