Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 U6.97-201ENST00000636904 101 ntBASIC-2.61□□□□□ -2.83
SMKR1H3BMG3 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.63□□□□□ -2.83
SMKR1H3BMG3 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.63□□□□□ -2.83
SMKR1H3BMG3 SNORD115-31-201ENST00000365318 82 ntBASIC-2.64□□□□□ -2.83
SMKR1H3BMG3 SNORD113-1-201ENST00000365321 69 ntBASIC-2.64□□□□□ -2.83
SMKR1H3BMG3 RNU6-49P-201ENST00000384256 107 ntBASIC-2.64□□□□□ -2.83
SMKR1H3BMG3 RNY3P8-201ENST00000411366 126 ntBASIC-2.64□□□□□ -2.83
SMKR1H3BMG3 RNU6-919P-201ENST00000516731 104 ntBASIC-2.65□□□□□ -2.83
SMKR1H3BMG3 MIR548AI-201ENST00000579940 88 ntBASIC-2.65□□□□□ -2.83
SMKR1H3BMG3 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.66□□□□□ -2.84
SMKR1H3BMG3 RNU6-215P-201ENST00000365169 102 ntBASIC-2.67□□□□□ -2.84
SMKR1H3BMG3 RNU6-974P-201ENST00000384099 108 ntBASIC-2.67□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 MIR4756-201ENST00000577874 78 ntBASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 MIR664B-201ENST00000626756 61 ntBASIC-2.68□□□□□ -2.84
SMKR1H3BMG3 SNORD18C-201ENST00000362704 69 ntBASIC-2.69□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.69□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.69□□□□□ -2.84
SMKR1H3BMG3 MIR3134-201ENST00000579433 74 ntBASIC-2.69□□□□□ -2.84
SMKR1H3BMG3 MIR7110-201ENST00000612638 86 ntBASIC-2.69□□□□□ -2.84
SMKR1H3BMG3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.69□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.7□□□□□ -2.84
SMKR1H3BMG3 RNU6-828P-201ENST00000364876 107 ntBASIC-2.7□□□□□ -2.84
SMKR1H3BMG3 SNORD20-201ENST00000384550 80 ntBASIC-2.7□□□□□ -2.84
SMKR1H3BMG3 RNU6-520P-201ENST00000384717 104 ntBASIC-2.7□□□□□ -2.84
SMKR1H3BMG3 RNU6-687P-201ENST00000516443 89 ntBASIC-2.7□□□□□ -2.84
SMKR1H3BMG3 SNORD60.1-201ENST00000362451 73 ntBASIC-2.71□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.71□□□□□ -2.84
SMKR1H3BMG3 RNU4-88P-201ENST00000411220 86 ntBASIC-2.71□□□□□ -2.84
SMKR1H3BMG3 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.71□□□□□ -2.84
SMKR1H3BMG3 RNU6-980P-201ENST00000516925 103 ntBASIC-2.72□□□□□ -2.84
SMKR1H3BMG3 SNORD60-201ENST00000383903 83 ntBASIC-2.73□□□□□ -2.85
SMKR1H3BMG3 RNU6-242P-201ENST00000384359 107 ntBASIC-2.73□□□□□ -2.85
SMKR1H3BMG3 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.75□□□□□ -2.85
SMKR1H3BMG3 RNA5SP89-201ENST00000410300 108 ntBASIC-2.75□□□□□ -2.85
SMKR1H3BMG3 AL606753.1-201ENST00000427435 87 ntBASIC-2.76□□□□□ -2.85
SMKR1H3BMG3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.76□□□□□ -2.85
SMKR1H3BMG3 RNU6-231P-201ENST00000517122 103 ntBASIC-2.76□□□□□ -2.85
SMKR1H3BMG3 RNU6-810P-201ENST00000364001 107 ntBASIC-2.77□□□□□ -2.85
SMKR1H3BMG3 RNU6-411P-201ENST00000384451 107 ntBASIC-2.77□□□□□ -2.85
SMKR1H3BMG3 MIR4666B-201ENST00000578142 81 ntBASIC-2.77□□□□□ -2.85
SMKR1H3BMG3 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.78□□□□□ -2.85
SMKR1H3BMG3 snoU13.10-201ENST00000459301 103 ntBASIC-2.78□□□□□ -2.85
SMKR1H3BMG3 MIR548W-201ENST00000581970 74 ntBASIC-2.78□□□□□ -2.85
SMKR1H3BMG3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.78□□□□□ -2.85
SMKR1H3BMG3 SNORD114-3-201ENST00000364969 75 ntBASIC-2.79□□□□□ -2.86
SMKR1H3BMG3 SNORD116.2-201ENST00000391251 93 ntBASIC-2.79□□□□□ -2.86
SMKR1H3BMG3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.79□□□□□ -2.86
SMKR1H3BMG3 MIR494-201ENST00000349529 81 ntBASIC-2.8□□□□□ -2.86
SMKR1H3BMG3 MIR202-201ENST00000362219 110 ntBASIC-2.8□□□□□ -2.86
SMKR1H3BMG3 RNU6-649P-201ENST00000384463 107 ntBASIC-2.8□□□□□ -2.86
SMKR1H3BMG3 RNY4P30-201ENST00000410216 95 ntBASIC-2.8□□□□□ -2.86
SMKR1H3BMG3 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.81□□□□□ -2.86
SMKR1H3BMG3 MIR548N-201ENST00000408742 75 ntBASIC-2.81□□□□□ -2.86
SMKR1H3BMG3 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.81□□□□□ -2.86
SMKR1H3BMG3 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.81□□□□□ -2.86
SMKR1H3BMG3 RNU6-44P-201ENST00000384045 107 ntBASIC-2.82□□□□□ -2.86
SMKR1H3BMG3 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.82□□□□□ -2.86
SMKR1H3BMG3 MIR450A2-201ENST00000385022 100 ntBASIC-2.82□□□□□ -2.86
SMKR1H3BMG3 U4.2-201ENST00000618561 85 ntBASIC-2.82□□□□□ -2.86
SMKR1H3BMG3 SNORA17.4-201ENST00000391287 132 ntBASIC-2.83□□□□□ -2.86
SMKR1H3BMG3 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.83□□□□□ -2.86
SMKR1H3BMG3 AL627230.5-201ENST00000619807 58 ntBASIC-2.83□□□□□ -2.86
SMKR1H3BMG3 RNU6-361P-201ENST00000364454 107 ntBASIC-2.84□□□□□ -2.86
SMKR1H3BMG3 MIR581-201ENST00000384895 96 ntBASIC-2.84□□□□□ -2.86
SMKR1H3BMG3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.84□□□□□ -2.86
SMKR1H3BMG3 U7.4-201ENST00000614961 63 ntBASIC-2.84□□□□□ -2.86
SMKR1H3BMG3 SNORA40B-201ENST00000385573 128 ntBASIC-2.85□□□□□ -2.87
SMKR1H3BMG3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.85□□□□□ -2.87
SMKR1H3BMG3 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.86□□□□□ -2.87
SMKR1H3BMG3 SNORA25.5-201ENST00000363782 126 ntBASIC-2.87□□□□□ -2.87
SMKR1H3BMG3 RNU6-634P-201ENST00000459134 106 ntBASIC-2.87□□□□□ -2.87
SMKR1H3BMG3 RNU6-663P-201ENST00000391105 106 ntBASIC-2.88□□□□□ -2.87
SMKR1H3BMG3 RNU6-122P-201ENST00000516818 107 ntBASIC-2.88□□□□□ -2.87
SMKR1H3BMG3 SNORD45.2-201ENST00000363552 72 ntBASIC-2.89□□□□□ -2.87
SMKR1H3BMG3 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.9□□□□□ -2.87
SMKR1H3BMG3 RNU7-119P-201ENST00000459279 63 ntBASIC-2.9□□□□□ -2.87
SMKR1H3BMG3 RNU6-194P-201ENST00000363862 105 ntBASIC-2.91□□□□□ -2.88
SMKR1H3BMG3 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.91□□□□□ -2.88
SMKR1H3BMG3 MIR466-201ENST00000580653 84 ntBASIC-2.91□□□□□ -2.88
SMKR1H3BMG3 RNU6-787P-201ENST00000384032 107 ntBASIC-2.92□□□□□ -2.88
SMKR1H3BMG3 RNU6-530P-201ENST00000391180 107 ntBASIC-2.92□□□□□ -2.88
SMKR1H3BMG3 AC097484.2-201ENST00000509147 251 ntBASIC-2.92□□□□□ -2.88
SMKR1H3BMG3 RNU6-118P-201ENST00000516552 102 ntBASIC-2.92□□□□□ -2.88
SMKR1H3BMG3 RNA5SP405-201ENST00000363059 114 ntBASIC-2.93□□□□□ -2.88
SMKR1H3BMG3 RNY4P27-201ENST00000363341 96 ntBASIC-2.93□□□□□ -2.88
SMKR1H3BMG3 SNORA25.4-201ENST00000363666 124 ntBASIC-2.93□□□□□ -2.88
SMKR1H3BMG3 RNU6-294P-201ENST00000364999 102 ntBASIC-2.93□□□□□ -2.88
SMKR1H3BMG3 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.94□□□□□ -2.88
SMKR1H3BMG3 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.94□□□□□ -2.88
SMKR1H3BMG3 SNORA40.16-201ENST00000517238 121 ntBASIC-2.94□□□□□ -2.88
SMKR1H3BMG3 RNU6-820P-201ENST00000384273 107 ntBASIC-2.95□□□□□ -2.88
SMKR1H3BMG3 FTX_4.1-201ENST00000616291 147 ntBASIC-2.95□□□□□ -2.88
SMKR1H3BMG3 RNU6-153P-201ENST00000364422 104 ntBASIC-2.96□□□□□ -2.88
SMKR1H3BMG3 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.96□□□□□ -2.88
SMKR1H3BMG3 AL451105.1-201ENST00000450005 189 ntBASIC-2.97□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms