Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU7-197P-201ENST00000458836 62 ntBASIC-3.51□□□□□ -2.97
COL6A5A8TX70 MTND2P14-201ENST00000482139 351 ntBASIC-3.51□□□□□ -2.97
COL6A5A8TX70 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.51□□□□□ -2.97
COL6A5A8TX70 RNU6-915P-201ENST00000364943 103 ntBASIC-3.52□□□□□ -2.97
COL6A5A8TX70 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-3.52□□□□□ -2.97
COL6A5A8TX70 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.52□□□□□ -2.97
COL6A5A8TX70 RNU6-219P-201ENST00000364728 107 ntBASIC-3.52□□□□□ -2.97
COL6A5A8TX70 MIR6863-201ENST00000636112 90 ntBASIC-3.52□□□□□ -2.97
COL6A5A8TX70 MIR590-201ENST00000385008 97 ntBASIC-3.53□□□□□ -2.97
COL6A5A8TX70 Y_RNA.88-201ENST00000363029 99 ntBASIC-3.53□□□□□ -2.97
COL6A5A8TX70 MIR559-201ENST00000385188 96 ntBASIC-3.54□□□□□ -2.98
COL6A5A8TX70 SNORD30.1-201ENST00000391309 70 ntBASIC-3.55□□□□□ -2.98
COL6A5A8TX70 RNU6-772P-201ENST00000516042 105 ntBASIC-3.55□□□□□ -2.98
COL6A5A8TX70 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.55□□□□□ -2.98
COL6A5A8TX70 RNU6-724P-201ENST00000390958 105 ntBASIC-3.57□□□□□ -2.98
COL6A5A8TX70 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-3.57□□□□□ -2.98
COL6A5A8TX70 AC044792.1-201ENST00000593294 196 ntBASIC-3.57□□□□□ -2.98
COL6A5A8TX70 RNU6-936P-201ENST00000384005 107 ntBASIC-3.57□□□□□ -2.98
COL6A5A8TX70 U6.111-201ENST00000636093 83 ntBASIC-3.58□□□□□ -2.98
COL6A5A8TX70 RNU6-1085P-201ENST00000363576 107 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 RNU6-908P-201ENST00000410160 94 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 SNORA81.3-201ENST00000517283 198 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 SNORD116.3-201ENST00000517176 78 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 MIR4643-201ENST00000577473 78 ntBASIC-3.59□□□□□ -2.98
COL6A5A8TX70 MTND5P22-201ENST00000458380 195 ntBASIC-3.6□□□□□ -2.99
COL6A5A8TX70 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.6□□□□□ -2.99
COL6A5A8TX70 MIR5690-201ENST00000583739 73 ntBASIC-3.6□□□□□ -2.99
COL6A5A8TX70 MIR4528-201ENST00000577763 90 ntBASIC-3.61□□□□□ -2.99
COL6A5A8TX70 AC040904.1-201ENST00000590850 223 ntBASIC-3.61□□□□□ -2.99
COL6A5A8TX70 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.61□□□□□ -2.99
COL6A5A8TX70 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.61□□□□□ -2.99
COL6A5A8TX70 RNU6-918P-201ENST00000391219 106 ntBASIC-3.62□□□□□ -2.99
COL6A5A8TX70 RNY3P10-201ENST00000384764 102 ntBASIC-3.63□□□□□ -2.99
COL6A5A8TX70 RNU6-109P-201ENST00000516364 107 ntBASIC-3.63□□□□□ -2.99
COL6A5A8TX70 RNU6-184P-201ENST00000516514 107 ntBASIC-3.63□□□□□ -2.99
COL6A5A8TX70 RNU6-675P-201ENST00000384236 104 ntBASIC-3.63□□□□□ -2.99
COL6A5A8TX70 RNU6-314P-201ENST00000516574 104 ntBASIC-3.63□□□□□ -2.99
COL6A5A8TX70 AL157777.2-201ENST00000258070 137 ntBASIC-3.64□□□□□ -2.99
COL6A5A8TX70 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.65□□□□□ -2.99
COL6A5A8TX70 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.66□□□□□ -2.99
COL6A5A8TX70 RNU6-242P-201ENST00000384359 107 ntBASIC-3.66□□□□□ -2.99
COL6A5A8TX70 RNU7-107P-201ENST00000459121 61 ntBASIC-3.66□□□□□ -2.99
COL6A5A8TX70 RNU6-988P-201ENST00000519081 107 ntBASIC-3.66□□□□□ -2.99
COL6A5A8TX70 SNORA26.8-201ENST00000391306 124 ntBASIC-3.66□□□□□ -3
COL6A5A8TX70 RNU7-171P-201ENST00000459581 62 ntBASIC-3.67□□□□□ -3
COL6A5A8TX70 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.67□□□□□ -3
COL6A5A8TX70 MTND4LP32-201ENST00000636111 270 ntBASIC-3.67□□□□□ -3
COL6A5A8TX70 RNU6-871P-201ENST00000516122 100 ntBASIC-3.68□□□□□ -3
COL6A5A8TX70 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.68□□□□□ -3
COL6A5A8TX70 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.68□□□□□ -3
COL6A5A8TX70 MIR4712-201ENST00000583750 82 ntBASIC-3.68□□□□□ -3
COL6A5A8TX70 MTND4P17-201ENST00000470444 350 ntBASIC-3.69□□□□□ -3
COL6A5A8TX70 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.69□□□□□ -3
COL6A5A8TX70 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.69□□□□□ -3
COL6A5A8TX70 Y_RNA.26-201ENST00000362539 101 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 MIR1302-11-201ENST00000408051 138 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 MIR1302-9-201ENST00000408365 138 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 MIR1302-10-201ENST00000408734 138 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 MIR1302-2-201ENST00000607096 138 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 AP003461.1-201ENST00000528866 78 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 AC109635.3-201ENST00000529536 185 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 U7.4-201ENST00000614961 63 ntBASIC-3.7□□□□□ -3
COL6A5A8TX70 RNU6-780P-201ENST00000391030 104 ntBASIC-3.71□□□□□ -3
COL6A5A8TX70 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.72□□□□□ -3
COL6A5A8TX70 MIR633-201ENST00000384821 98 ntBASIC-3.72□□□□□ -3
COL6A5A8TX70 SNORA40.13-201ENST00000516379 120 ntBASIC-3.73□□□□□ -3.01
COL6A5A8TX70 RNU6-471P-201ENST00000383944 106 ntBASIC-3.73□□□□□ -3.01
COL6A5A8TX70 RNU6-483P-201ENST00000384088 108 ntBASIC-3.73□□□□□ -3.01
COL6A5A8TX70 MIR1252-201ENST00000408861 65 ntBASIC-3.73□□□□□ -3.01
COL6A5A8TX70 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-3.73□□□□□ -3.01
COL6A5A8TX70 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.73□□□□□ -3.01
COL6A5A8TX70 RNU6-844P-201ENST00000517175 102 ntBASIC-3.73□□□□□ -3.01
COL6A5A8TX70 SNORA26.2-201ENST00000390922 122 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 RNU6-823P-201ENST00000391042 103 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 RNU4-14P-201ENST00000410858 122 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 AC079150.2-201ENST00000443733 78 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 RNU7-30P-201ENST00000516835 62 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 MIR3671-201ENST00000580455 88 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 MIR1245B-201ENST00000636115 69 ntBASIC-3.74□□□□□ -3.01
COL6A5A8TX70 MIR5588-201ENST00000581890 63 ntBASIC-3.75□□□□□ -3.01
COL6A5A8TX70 SNORD116-21-201ENST00000384507 92 ntBASIC-3.75□□□□□ -3.01
COL6A5A8TX70 U6.95-201ENST00000636931 70 ntBASIC-3.75□□□□□ -3.01
COL6A5A8TX70 Y_RNA.276-201ENST00000364732 109 ntBASIC-3.76□□□□□ -3.01
COL6A5A8TX70 MALAT1.1-201ENST00000618249 95 ntBASIC-3.76□□□□□ -3.01
COL6A5A8TX70 RNU6-614P-201ENST00000384369 107 ntBASIC-3.77□□□□□ -3.01
COL6A5A8TX70 AC113139.1-201ENST00000605049 239 ntBASIC-3.77□□□□□ -3.01
COL6A5A8TX70 U6.59-201ENST00000615686 107 ntBASIC-3.77□□□□□ -3.01
COL6A5A8TX70 SNORD116-4-201ENST00000384733 96 ntBASIC-3.78□□□□□ -3.01
COL6A5A8TX70 MIR4760-201ENST00000585040 80 ntBASIC-3.78□□□□□ -3.01
COL6A5A8TX70 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.78□□□□□ -3.02
COL6A5A8TX70 SNORD116-29-201ENST00000384516 83 ntBASIC-3.78□□□□□ -3.02
COL6A5A8TX70 RNU6-906P-201ENST00000384700 70 ntBASIC-3.79□□□□□ -3.02
COL6A5A8TX70 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.79□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 253.7 ms