Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 RNU6-406P-201ENST00000516470 107 ntBASIC-1.16□□□□□ -2.6
FOXA2Q9Y261 U6.58-201ENST00000613107 107 ntBASIC-1.16□□□□□ -2.6
FOXA2Q9Y261 MIR5683-201ENST00000636514 76 ntBASIC-1.16□□□□□ -2.6
FOXA2Q9Y261 RNU6-698P-201ENST00000363523 107 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 RNY1P1-201ENST00000364372 112 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 RNU6-34P-201ENST00000364874 107 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 MTND4LP1-201ENST00000446263 157 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 RNU6-983P-201ENST00000516004 103 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 MIR4756-201ENST00000577874 78 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 MIR4490-201ENST00000582647 84 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 MIR8053-201ENST00000613344 75 ntBASIC-1.17□□□□□ -2.6
FOXA2Q9Y261 RNU6-315P-201ENST00000362666 107 ntBASIC-1.18□□□□□ -2.6
FOXA2Q9Y261 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.18□□□□□ -2.6
FOXA2Q9Y261 RNU6-49P-201ENST00000384256 107 ntBASIC-1.18□□□□□ -2.6
FOXA2Q9Y261 AC108019.1-201ENST00000512540 175 ntBASIC-1.18□□□□□ -2.6
FOXA2Q9Y261 MIR548AI-201ENST00000579940 88 ntBASIC-1.18□□□□□ -2.6
FOXA2Q9Y261 MIR429-201ENST00000362106 83 ntBASIC-1.19□□□□□ -2.6
FOXA2Q9Y261 RNU6-79P-201ENST00000362511 107 ntBASIC-1.19□□□□□ -2.6
FOXA2Q9Y261 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.19□□□□□ -2.6
FOXA2Q9Y261 RNA5SP89-201ENST00000410300 108 ntBASIC-1.19□□□□□ -2.6
FOXA2Q9Y261 MIR5588-201ENST00000581890 63 ntBASIC-1.19□□□□□ -2.6
FOXA2Q9Y261 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.2□□□□□ -2.6
FOXA2Q9Y261 RNU6-696P-201ENST00000390834 107 ntBASIC-1.2□□□□□ -2.6
FOXA2Q9Y261 U4.4-201ENST00000620626 117 ntBASIC-1.2□□□□□ -2.6
FOXA2Q9Y261 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 SNORD113.1-201ENST00000363280 73 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 RNU6-668P-201ENST00000364180 107 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 RNU6-979P-201ENST00000383896 107 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 MIR548Q-201ENST00000408404 100 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 RNA5SP266-201ENST00000410273 108 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 MIR548V-201ENST00000584165 80 ntBASIC-1.21□□□□□ -2.6
FOXA2Q9Y261 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.22□□□□□ -2.6
FOXA2Q9Y261 RNA5SP215-201ENST00000363440 122 ntBASIC-1.22□□□□□ -2.6
FOXA2Q9Y261 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.22□□□□□ -2.6
FOXA2Q9Y261 MIR520D-201ENST00000385002 87 ntBASIC-1.22□□□□□ -2.6
FOXA2Q9Y261 RNU6-608P-201ENST00000383927 104 ntBASIC-1.23□□□□□ -2.61
FOXA2Q9Y261 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.23□□□□□ -2.61
FOXA2Q9Y261 MIR664A-201ENST00000626086 82 ntBASIC-1.23□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.24□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.24□□□□□ -2.61
FOXA2Q9Y261 SNORD45A-201ENST00000384512 84 ntBASIC-1.24□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.24□□□□□ -2.61
FOXA2Q9Y261 MIR630-201ENST00000384957 97 ntBASIC-1.24□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.25□□□□□ -2.61
FOXA2Q9Y261 RNU6-563P-201ENST00000364872 108 ntBASIC-1.25□□□□□ -2.61
FOXA2Q9Y261 RNU7-171P-201ENST00000459581 62 ntBASIC-1.25□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.26□□□□□ -2.61
FOXA2Q9Y261 SNORD113-2-201ENST00000391082 72 ntBASIC-1.26□□□□□ -2.61
FOXA2Q9Y261 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
FOXA2Q9Y261 RNY4P30-201ENST00000410216 95 ntBASIC-1.26□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.26□□□□□ -2.61
FOXA2Q9Y261 RNU6-598P-201ENST00000364017 105 ntBASIC-1.27□□□□□ -2.61
FOXA2Q9Y261 MIR664B-201ENST00000626756 61 ntBASIC-1.27□□□□□ -2.61
FOXA2Q9Y261 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.28□□□□□ -2.61
FOXA2Q9Y261 AC018880.2-201ENST00000414265 201 ntBASIC-1.28□□□□□ -2.61
FOXA2Q9Y261 MIR4712-201ENST00000583750 82 ntBASIC-1.28□□□□□ -2.61
FOXA2Q9Y261 MIR1245B-201ENST00000636115 69 ntBASIC-1.28□□□□□ -2.61
FOXA2Q9Y261 RNA5SP173-201ENST00000364857 136 ntBASIC-1.29□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.29□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.29□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.29□□□□□ -2.62
FOXA2Q9Y261 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.29□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.3□□□□□ -2.62
FOXA2Q9Y261 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.3□□□□□ -2.62
FOXA2Q9Y261 RNU6-695P-201ENST00000391157 104 ntBASIC-1.3□□□□□ -2.62
FOXA2Q9Y261 RNU6-630P-201ENST00000391258 106 ntBASIC-1.3□□□□□ -2.62
FOXA2Q9Y261 MIR4441-201ENST00000582623 100 ntBASIC-1.3□□□□□ -2.62
FOXA2Q9Y261 MIR3123-201ENST00000583417 75 ntBASIC-1.3□□□□□ -2.62
FOXA2Q9Y261 RNU6-153P-201ENST00000364422 104 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 SNORD116-16-201ENST00000384533 92 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 RNU6-70P-201ENST00000516438 60 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 U2.18-201ENST00000622185 84 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 U2.22-201ENST00000636441 106 ntBASIC-1.31□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.32□□□□□ -2.62
FOXA2Q9Y261 RNU6-242P-201ENST00000384359 107 ntBASIC-1.32□□□□□ -2.62
FOXA2Q9Y261 MIR154-201ENST00000385243 84 ntBASIC-1.32□□□□□ -2.62
FOXA2Q9Y261 RNU6-258P-201ENST00000390884 101 ntBASIC-1.32□□□□□ -2.62
FOXA2Q9Y261 MIR548AM-201ENST00000584298 74 ntBASIC-1.32□□□□□ -2.62
FOXA2Q9Y261 MIR494-201ENST00000349529 81 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 MIR365A-201ENST00000362260 87 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 SNORD115-31-201ENST00000365318 82 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 MIR450A2-201ENST00000385022 100 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 RNU4-88P-201ENST00000411220 86 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 RNU6-980P-201ENST00000516925 103 ntBASIC-1.33□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.34□□□□□ -2.62
FOXA2Q9Y261 RNU6-895P-201ENST00000384125 103 ntBASIC-1.34□□□□□ -2.62
FOXA2Q9Y261 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.34□□□□□ -2.62
FOXA2Q9Y261 AC120024.2-201ENST00000576526 175 ntBASIC-1.34□□□□□ -2.62
FOXA2Q9Y261 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.34□□□□□ -2.62
FOXA2Q9Y261 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.35□□□□□ -2.63
FOXA2Q9Y261 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.35□□□□□ -2.63
FOXA2Q9Y261 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.35□□□□□ -2.63
FOXA2Q9Y261 SNORA41B-201ENST00000384785 128 ntBASIC-1.35□□□□□ -2.63
FOXA2Q9Y261 MIR548AA1-201ENST00000384971 97 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms