Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MIR3123-201ENST00000583417 75 ntBASIC-1.55□□□□□ -2.66
CTSFQ9UBX1 MIR198-201ENST00000637333 62 ntBASIC-1.55□□□□□ -2.66
CTSFQ9UBX1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 MIR601-201ENST00000385256 79 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 RNU6-313P-201ENST00000516317 112 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 AC120024.2-201ENST00000576526 175 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 MIR4484-201ENST00000582855 83 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 U4.4-201ENST00000620626 117 ntBASIC-1.56□□□□□ -2.66
CTSFQ9UBX1 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.57□□□□□ -2.66
CTSFQ9UBX1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.57□□□□□ -2.66
CTSFQ9UBX1 MIR548M-201ENST00000408260 86 ntBASIC-1.57□□□□□ -2.66
CTSFQ9UBX1 MIR664B-201ENST00000626756 61 ntBASIC-1.57□□□□□ -2.66
CTSFQ9UBX1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.58□□□□□ -2.66
CTSFQ9UBX1 MIR548V-201ENST00000584165 80 ntBASIC-1.58□□□□□ -2.66
CTSFQ9UBX1 MIR365A-201ENST00000362260 87 ntBASIC-1.59□□□□□ -2.66
CTSFQ9UBX1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.59□□□□□ -2.66
CTSFQ9UBX1 MIR548AM-201ENST00000584298 74 ntBASIC-1.59□□□□□ -2.66
CTSFQ9UBX1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 MIR4441-201ENST00000582623 100 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 MIR3170-201ENST00000582699 77 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 MIR1297-201ENST00000637311 77 ntBASIC-1.6□□□□□ -2.67
CTSFQ9UBX1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.61□□□□□ -2.67
CTSFQ9UBX1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.61□□□□□ -2.67
CTSFQ9UBX1 AC006160.2-201ENST00000637708 154 ntBASIC-1.61□□□□□ -2.67
CTSFQ9UBX1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 MIR630-201ENST00000384957 97 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 AC005520.4-201ENST00000604337 90 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 AC013734.1-201ENST00000619329 111 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.62□□□□□ -2.67
CTSFQ9UBX1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.63□□□□□ -2.67
CTSFQ9UBX1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.63□□□□□ -2.67
CTSFQ9UBX1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.63□□□□□ -2.67
CTSFQ9UBX1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.63□□□□□ -2.67
CTSFQ9UBX1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.64□□□□□ -2.67
CTSFQ9UBX1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.64□□□□□ -2.67
CTSFQ9UBX1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.64□□□□□ -2.67
CTSFQ9UBX1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.64□□□□□ -2.67
CTSFQ9UBX1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.64□□□□□ -2.67
CTSFQ9UBX1 MIR664A-201ENST00000626086 82 ntBASIC-1.64□□□□□ -2.67
CTSFQ9UBX1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.65□□□□□ -2.67
CTSFQ9UBX1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.65□□□□□ -2.67
CTSFQ9UBX1 MIR8053-201ENST00000613344 75 ntBASIC-1.65□□□□□ -2.67
CTSFQ9UBX1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.65□□□□□ -2.67
CTSFQ9UBX1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.66□□□□□ -2.68
CTSFQ9UBX1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.66□□□□□ -2.68
CTSFQ9UBX1 MIR1468-201ENST00000410600 86 ntBASIC-1.66□□□□□ -2.68
CTSFQ9UBX1 MIR23C-201ENST00000579846 100 ntBASIC-1.66□□□□□ -2.68
CTSFQ9UBX1 MIR548W-201ENST00000581970 74 ntBASIC-1.66□□□□□ -2.68
CTSFQ9UBX1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.66□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.67□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.68□□□□□ -2.68
CTSFQ9UBX1 SNORD113-1-201ENST00000365321 69 ntBASIC-1.68□□□□□ -2.68
CTSFQ9UBX1 SNORD45A-201ENST00000384512 84 ntBASIC-1.68□□□□□ -2.68
CTSFQ9UBX1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.68□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.68□□□□□ -2.68
CTSFQ9UBX1 SNORD1B-201ENST00000363091 84 ntBASIC-1.69□□□□□ -2.68
CTSFQ9UBX1 SNORA41B-201ENST00000384785 128 ntBASIC-1.69□□□□□ -2.68
CTSFQ9UBX1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.69□□□□□ -2.68
CTSFQ9UBX1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.69□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.69□□□□□ -2.68
CTSFQ9UBX1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.7□□□□□ -2.68
CTSFQ9UBX1 snoU13.10-201ENST00000459301 103 ntBASIC-1.7□□□□□ -2.68
CTSFQ9UBX1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.71□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.71□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.71□□□□□ -2.68
CTSFQ9UBX1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.71□□□□□ -2.68
CTSFQ9UBX1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.72□□□□□ -2.68
CTSFQ9UBX1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.72□□□□□ -2.68
CTSFQ9UBX1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.72□□□□□ -2.68
CTSFQ9UBX1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.72□□□□□ -2.68
CTSFQ9UBX1 RNY3P8-201ENST00000411366 126 ntBASIC-1.72□□□□□ -2.68
CTSFQ9UBX1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.72□□□□□ -2.68
CTSFQ9UBX1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.73□□□□□ -2.69
CTSFQ9UBX1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.73□□□□□ -2.69
CTSFQ9UBX1 RNU6-49P-201ENST00000384256 107 ntBASIC-1.73□□□□□ -2.69
CTSFQ9UBX1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.73□□□□□ -2.69
CTSFQ9UBX1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.73□□□□□ -2.69
CTSFQ9UBX1 U6.97-201ENST00000636904 101 ntBASIC-1.73□□□□□ -2.69
CTSFQ9UBX1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 SNORD20-201ENST00000384550 80 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 MIR581-201ENST00000384895 96 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 U4.2-201ENST00000618561 85 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.74□□□□□ -2.69
CTSFQ9UBX1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms