Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP215-201ENST00000363440 122 ntBASIC-1.57□□□□□ -2.66
CLCF1Q9UBD9 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.57□□□□□ -2.66
CLCF1Q9UBD9 RNU6-919P-201ENST00000516731 104 ntBASIC-1.57□□□□□ -2.66
CLCF1Q9UBD9 RNU6-668P-201ENST00000364180 107 ntBASIC-1.58□□□□□ -2.66
CLCF1Q9UBD9 MIR630-201ENST00000384957 97 ntBASIC-1.58□□□□□ -2.66
CLCF1Q9UBD9 RNU6-315P-201ENST00000362666 107 ntBASIC-1.59□□□□□ -2.66
CLCF1Q9UBD9 RNU6-215P-201ENST00000365169 102 ntBASIC-1.59□□□□□ -2.66
CLCF1Q9UBD9 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.59□□□□□ -2.66
CLCF1Q9UBD9 AC018880.2-201ENST00000414265 201 ntBASIC-1.59□□□□□ -2.66
CLCF1Q9UBD9 IGLL4P-201ENST00000614590 133 ntBASIC-1.59□□□□□ -2.66
CLCF1Q9UBD9 MIR601-201ENST00000385256 79 ntBASIC-1.6□□□□□ -2.67
CLCF1Q9UBD9 MIR1468-201ENST00000410600 86 ntBASIC-1.6□□□□□ -2.67
CLCF1Q9UBD9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.6□□□□□ -2.67
CLCF1Q9UBD9 MIR4770-201ENST00000579149 58 ntBASIC-1.6□□□□□ -2.67
CLCF1Q9UBD9 MIR664A-201ENST00000626086 82 ntBASIC-1.6□□□□□ -2.67
CLCF1Q9UBD9 SNORD113.1-201ENST00000363280 73 ntBASIC-1.61□□□□□ -2.67
CLCF1Q9UBD9 SNORD20-201ENST00000384550 80 ntBASIC-1.61□□□□□ -2.67
CLCF1Q9UBD9 MIR487B-201ENST00000385021 84 ntBASIC-1.61□□□□□ -2.67
CLCF1Q9UBD9 SNORD113-2-201ENST00000391082 72 ntBASIC-1.61□□□□□ -2.67
CLCF1Q9UBD9 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.62□□□□□ -2.67
CLCF1Q9UBD9 RNY1P1-201ENST00000364372 112 ntBASIC-1.62□□□□□ -2.67
CLCF1Q9UBD9 RNA5SP173-201ENST00000364857 136 ntBASIC-1.62□□□□□ -2.67
CLCF1Q9UBD9 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.62□□□□□ -2.67
CLCF1Q9UBD9 RNU6-563P-201ENST00000364872 108 ntBASIC-1.63□□□□□ -2.67
CLCF1Q9UBD9 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.63□□□□□ -2.67
CLCF1Q9UBD9 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.63□□□□□ -2.67
CLCF1Q9UBD9 RNA5SP461-201ENST00000516451 104 ntBASIC-1.63□□□□□ -2.67
CLCF1Q9UBD9 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.64□□□□□ -2.67
CLCF1Q9UBD9 RNA5SP86-201ENST00000390869 98 ntBASIC-1.64□□□□□ -2.67
CLCF1Q9UBD9 RNU6-258P-201ENST00000390884 101 ntBASIC-1.64□□□□□ -2.67
CLCF1Q9UBD9 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.64□□□□□ -2.67
CLCF1Q9UBD9 RNU6-79P-201ENST00000362511 107 ntBASIC-1.65□□□□□ -2.67
CLCF1Q9UBD9 SNORA41B-201ENST00000384785 128 ntBASIC-1.66□□□□□ -2.68
CLCF1Q9UBD9 AL603908.1-201ENST00000406098 201 ntBASIC-1.66□□□□□ -2.68
CLCF1Q9UBD9 RNU6-789P-201ENST00000517105 102 ntBASIC-1.66□□□□□ -2.68
CLCF1Q9UBD9 MIR5588-201ENST00000581890 63 ntBASIC-1.66□□□□□ -2.68
CLCF1Q9UBD9 MIR3170-201ENST00000582699 77 ntBASIC-1.66□□□□□ -2.68
CLCF1Q9UBD9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.66□□□□□ -2.68
CLCF1Q9UBD9 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.67□□□□□ -2.68
CLCF1Q9UBD9 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.67□□□□□ -2.68
CLCF1Q9UBD9 SNORD45A-201ENST00000384512 84 ntBASIC-1.67□□□□□ -2.68
CLCF1Q9UBD9 MIR548H1-201ENST00000408610 102 ntBASIC-1.67□□□□□ -2.68
CLCF1Q9UBD9 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.68□□□□□ -2.68
CLCF1Q9UBD9 SNORD116-16-201ENST00000384533 92 ntBASIC-1.68□□□□□ -2.68
CLCF1Q9UBD9 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.69□□□□□ -2.68
CLCF1Q9UBD9 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.69□□□□□ -2.68
CLCF1Q9UBD9 RNU6-979P-201ENST00000383896 107 ntBASIC-1.69□□□□□ -2.68
CLCF1Q9UBD9 AC120024.2-201ENST00000576526 175 ntBASIC-1.69□□□□□ -2.68
CLCF1Q9UBD9 MIR23C-201ENST00000579846 100 ntBASIC-1.69□□□□□ -2.68
CLCF1Q9UBD9 RNU6-49P-201ENST00000384256 107 ntBASIC-1.7□□□□□ -2.68
CLCF1Q9UBD9 MIR548AA1-201ENST00000384971 97 ntBASIC-1.7□□□□□ -2.68
CLCF1Q9UBD9 MIR579-201ENST00000385221 98 ntBASIC-1.71□□□□□ -2.68
CLCF1Q9UBD9 SNORD1B-201ENST00000363091 84 ntBASIC-1.72□□□□□ -2.68
CLCF1Q9UBD9 RNU6-44P-201ENST00000384045 107 ntBASIC-1.72□□□□□ -2.68
CLCF1Q9UBD9 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.72□□□□□ -2.68
CLCF1Q9UBD9 RNU6-400P-201ENST00000391173 106 ntBASIC-1.72□□□□□ -2.68
CLCF1Q9UBD9 RNU7-171P-201ENST00000459581 62 ntBASIC-1.72□□□□□ -2.68
CLCF1Q9UBD9 MIR548AI-201ENST00000579940 88 ntBASIC-1.72□□□□□ -2.68
CLCF1Q9UBD9 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.73□□□□□ -2.69
CLCF1Q9UBD9 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.73□□□□□ -2.69
CLCF1Q9UBD9 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.73□□□□□ -2.69
CLCF1Q9UBD9 RNU6-540P-201ENST00000384622 101 ntBASIC-1.73□□□□□ -2.69
CLCF1Q9UBD9 RNA5SP89-201ENST00000410300 108 ntBASIC-1.73□□□□□ -2.69
CLCF1Q9UBD9 MIR1245B-201ENST00000636115 69 ntBASIC-1.73□□□□□ -2.69
CLCF1Q9UBD9 RNU6-895P-201ENST00000384125 103 ntBASIC-1.74□□□□□ -2.69
CLCF1Q9UBD9 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.74□□□□□ -2.69
CLCF1Q9UBD9 MIR154-201ENST00000385243 84 ntBASIC-1.74□□□□□ -2.69
CLCF1Q9UBD9 RNU6-70P-201ENST00000516438 60 ntBASIC-1.74□□□□□ -2.69
CLCF1Q9UBD9 RNA5SP180-201ENST00000516181 101 ntBASIC-1.75□□□□□ -2.69
CLCF1Q9UBD9 MIR4712-201ENST00000583750 82 ntBASIC-1.75□□□□□ -2.69
CLCF1Q9UBD9 RNU6-247P-201ENST00000362636 107 ntBASIC-1.76□□□□□ -2.69
CLCF1Q9UBD9 RNU6-228P-201ENST00000362700 106 ntBASIC-1.76□□□□□ -2.69
CLCF1Q9UBD9 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.76□□□□□ -2.69
CLCF1Q9UBD9 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.77□□□□□ -2.69
CLCF1Q9UBD9 RNU7-151P-201ENST00000516930 53 ntBASIC-1.77□□□□□ -2.69
CLCF1Q9UBD9 MIR4723-201ENST00000585070 81 ntBASIC-1.77□□□□□ -2.69
CLCF1Q9UBD9 AC013734.1-201ENST00000619329 111 ntBASIC-1.77□□□□□ -2.69
CLCF1Q9UBD9 MIR1246-201ENST00000636535 73 ntBASIC-1.77□□□□□ -2.69
CLCF1Q9UBD9 RNU6-974P-201ENST00000384099 108 ntBASIC-1.78□□□□□ -2.69
CLCF1Q9UBD9 RNU6-242P-201ENST00000384359 107 ntBASIC-1.78□□□□□ -2.69
CLCF1Q9UBD9 RNU6-995P-201ENST00000391244 107 ntBASIC-1.78□□□□□ -2.69
CLCF1Q9UBD9 RNY4P30-201ENST00000410216 95 ntBASIC-1.78□□□□□ -2.69
CLCF1Q9UBD9 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.78□□□□□ -2.69
CLCF1Q9UBD9 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.79□□□□□ -2.7
CLCF1Q9UBD9 SNORD18.1-201ENST00000363807 70 ntBASIC-1.79□□□□□ -2.7
CLCF1Q9UBD9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.79□□□□□ -2.7
CLCF1Q9UBD9 RNU6-695P-201ENST00000391157 104 ntBASIC-1.79□□□□□ -2.7
CLCF1Q9UBD9 RNU6-406P-201ENST00000516470 107 ntBASIC-1.79□□□□□ -2.7
CLCF1Q9UBD9 AC005520.4-201ENST00000604337 90 ntBASIC-1.79□□□□□ -2.7
CLCF1Q9UBD9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.8□□□□□ -2.7
CLCF1Q9UBD9 U6.97-201ENST00000636904 101 ntBASIC-1.8□□□□□ -2.7
CLCF1Q9UBD9 RNU6-669P-201ENST00000365575 107 ntBASIC-1.81□□□□□ -2.7
CLCF1Q9UBD9 SNORD63.2-201ENST00000516303 64 ntBASIC-1.81□□□□□ -2.7
CLCF1Q9UBD9 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.81□□□□□ -2.7
CLCF1Q9UBD9 SNORD116-24-201ENST00000384549 92 ntBASIC-1.82□□□□□ -2.7
CLCF1Q9UBD9 RNU6-172P-201ENST00000411000 93 ntBASIC-1.82□□□□□ -2.7
CLCF1Q9UBD9 MIR4756-201ENST00000577874 78 ntBASIC-1.82□□□□□ -2.7
CLCF1Q9UBD9 MIR3123-201ENST00000583417 75 ntBASIC-1.82□□□□□ -2.7
CLCF1Q9UBD9 MIR7978-201ENST00000636158 59 ntBASIC-1.82□□□□□ -2.7
CLCF1Q9UBD9 MIR450A2-201ENST00000385022 100 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms