Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNORD45A-201ENST00000384512 84 ntBASIC-0.81□□□□□ -2.54
DDX4Q9NQI0 U7.4-201ENST00000614961 63 ntBASIC-0.82□□□□□ -2.54
DDX4Q9NQI0 RNU6-698P-201ENST00000363523 107 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 RNA5SP173-201ENST00000364857 136 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 RNU6-34P-201ENST00000364874 107 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 RNU6-895P-201ENST00000384125 103 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 MIR1468-201ENST00000410600 86 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 RNU7-88P-201ENST00000458752 63 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 U7.5-201ENST00000517224 61 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 MIR4499-201ENST00000584834 69 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 MIR4320-201ENST00000636981 65 ntBASIC-0.83□□□□□ -2.54
DDX4Q9NQI0 RNU6-411P-201ENST00000384451 107 ntBASIC-0.84□□□□□ -2.54
DDX4Q9NQI0 RNU6-732P-201ENST00000516033 103 ntBASIC-0.84□□□□□ -2.54
DDX4Q9NQI0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.84□□□□□ -2.54
DDX4Q9NQI0 uc_338.19-201ENST00000616808 99 ntBASIC-0.84□□□□□ -2.54
DDX4Q9NQI0 MIR429-201ENST00000362106 83 ntBASIC-0.85□□□□□ -2.55
DDX4Q9NQI0 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.85□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.85□□□□□ -2.55
DDX4Q9NQI0 MIR3115-201ENST00000577915 68 ntBASIC-0.85□□□□□ -2.55
DDX4Q9NQI0 MIR4723-201ENST00000585070 81 ntBASIC-0.85□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.86□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.86□□□□□ -2.55
DDX4Q9NQI0 MIR378F-201ENST00000578143 78 ntBASIC-0.86□□□□□ -2.55
DDX4Q9NQI0 MIR3134-201ENST00000579433 74 ntBASIC-0.86□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.86□□□□□ -2.55
DDX4Q9NQI0 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 RNU6-458P-201ENST00000384179 107 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 SNORD19-201ENST00000391191 68 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 AL353691.2-201ENST00000443795 59 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 U6.58-201ENST00000613107 107 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 U4.4-201ENST00000620626 117 ntBASIC-0.87□□□□□ -2.55
DDX4Q9NQI0 RNA5SP192-201ENST00000364404 120 ntBASIC-0.88□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.88□□□□□ -2.55
DDX4Q9NQI0 RNU6-573P-201ENST00000383938 106 ntBASIC-0.88□□□□□ -2.55
DDX4Q9NQI0 RNU6-279P-201ENST00000391297 101 ntBASIC-0.88□□□□□ -2.55
DDX4Q9NQI0 AP002795.1-201ENST00000534879 84 ntBASIC-0.88□□□□□ -2.55
DDX4Q9NQI0 MIR198-201ENST00000637333 62 ntBASIC-0.88□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.89□□□□□ -2.55
DDX4Q9NQI0 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.89□□□□□ -2.55
DDX4Q9NQI0 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.89□□□□□ -2.55
DDX4Q9NQI0 SNORD113-2-201ENST00000391082 72 ntBASIC-0.89□□□□□ -2.55
DDX4Q9NQI0 MIR548V-201ENST00000584165 80 ntBASIC-0.89□□□□□ -2.55
DDX4Q9NQI0 MIR527-201ENST00000385244 85 ntBASIC-0.9□□□□□ -2.55
DDX4Q9NQI0 RNU6-687P-201ENST00000516443 89 ntBASIC-0.9□□□□□ -2.55
DDX4Q9NQI0 MIR4306-201ENST00000583390 91 ntBASIC-0.9□□□□□ -2.55
DDX4Q9NQI0 RNU6-228P-201ENST00000362700 106 ntBASIC-0.91□□□□□ -2.56
DDX4Q9NQI0 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.91□□□□□ -2.56
DDX4Q9NQI0 MIR29B1-201ENST00000385015 81 ntBASIC-0.91□□□□□ -2.56
DDX4Q9NQI0 MIR630-201ENST00000384957 97 ntBASIC-0.92□□□□□ -2.56
DDX4Q9NQI0 MIR1255A-201ENST00000408338 113 ntBASIC-0.92□□□□□ -2.56
DDX4Q9NQI0 RNU6-857P-201ENST00000515893 110 ntBASIC-0.92□□□□□ -2.56
DDX4Q9NQI0 MIR6818-201ENST00000621576 65 ntBASIC-0.92□□□□□ -2.56
DDX4Q9NQI0 MIR5683-201ENST00000636514 76 ntBASIC-0.92□□□□□ -2.56
DDX4Q9NQI0 RNA5SP26-201ENST00000362406 119 ntBASIC-0.93□□□□□ -2.56
DDX4Q9NQI0 MIR507-201ENST00000385234 94 ntBASIC-0.93□□□□□ -2.56
DDX4Q9NQI0 MIR601-201ENST00000385256 79 ntBASIC-0.93□□□□□ -2.56
DDX4Q9NQI0 SNORD78.1-201ENST00000390866 65 ntBASIC-0.93□□□□□ -2.56
DDX4Q9NQI0 RNU7-134P-201ENST00000458997 64 ntBASIC-0.93□□□□□ -2.56
DDX4Q9NQI0 SNORD115-31-201ENST00000365318 82 ntBASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 RNU6-696P-201ENST00000390834 107 ntBASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 MIR3165-201ENST00000579874 75 ntBASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 MIR4679-1-201ENST00000637619 75 ntBASIC-0.94□□□□□ -2.56
DDX4Q9NQI0 RNU6-598P-201ENST00000364017 105 ntBASIC-0.95□□□□□ -2.56
DDX4Q9NQI0 SNORD116-24-201ENST00000384549 92 ntBASIC-0.95□□□□□ -2.56
DDX4Q9NQI0 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.95□□□□□ -2.56
DDX4Q9NQI0 MIR548Q-201ENST00000408404 100 ntBASIC-0.96□□□□□ -2.56
DDX4Q9NQI0 RNU6-634P-201ENST00000459134 106 ntBASIC-0.96□□□□□ -2.56
DDX4Q9NQI0 MIR4490-201ENST00000582647 84 ntBASIC-0.96□□□□□ -2.56
DDX4Q9NQI0 RNA5SP461-201ENST00000516451 104 ntBASIC-0.97□□□□□ -2.56
DDX4Q9NQI0 SNORD116-16-201ENST00000384533 92 ntBASIC-0.98□□□□□ -2.57
DDX4Q9NQI0 RPL35AP4-201ENST00000412007 102 ntBASIC-0.98□□□□□ -2.57
DDX4Q9NQI0 RNU6-871P-201ENST00000516122 100 ntBASIC-0.98□□□□□ -2.57
DDX4Q9NQI0 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.99□□□□□ -2.57
DDX4Q9NQI0 SNORA41B-201ENST00000384785 128 ntBASIC-0.99□□□□□ -2.57
DDX4Q9NQI0 RNA5SP180-201ENST00000516181 101 ntBASIC-0.99□□□□□ -2.57
DDX4Q9NQI0 RNU6-542P-201ENST00000516405 103 ntBASIC-0.99□□□□□ -2.57
DDX4Q9NQI0 U2.18-201ENST00000622185 84 ntBASIC-0.99□□□□□ -2.57
DDX4Q9NQI0 RNU6-576P-201ENST00000390854 102 ntBASIC-1□□□□□ -2.57
DDX4Q9NQI0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1□□□□□ -2.57
DDX4Q9NQI0 RNU6-630P-201ENST00000391258 106 ntBASIC-1.02□□□□□ -2.57
DDX4Q9NQI0 AC090616.4-201ENST00000448026 115 ntBASIC-1.02□□□□□ -2.57
DDX4Q9NQI0 RNU6-706P-201ENST00000517229 104 ntBASIC-1.02□□□□□ -2.57
DDX4Q9NQI0 MIR520D-201ENST00000385002 87 ntBASIC-1.03□□□□□ -2.57
DDX4Q9NQI0 SNORD1B-201ENST00000363091 84 ntBASIC-1.04□□□□□ -2.58
DDX4Q9NQI0 RNU6-164P-201ENST00000364604 103 ntBASIC-1.04□□□□□ -2.58
DDX4Q9NQI0 RNU6-663P-201ENST00000391105 106 ntBASIC-1.04□□□□□ -2.58
DDX4Q9NQI0 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.05□□□□□ -2.58
DDX4Q9NQI0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.05□□□□□ -2.58
DDX4Q9NQI0 RNU6-608P-201ENST00000383927 104 ntBASIC-1.05□□□□□ -2.58
DDX4Q9NQI0 AC138207.3-201ENST00000585289 166 ntBASIC-1.05□□□□□ -2.58
DDX4Q9NQI0 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.06□□□□□ -2.58
DDX4Q9NQI0 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.06□□□□□ -2.58
DDX4Q9NQI0 RNA5SP225-201ENST00000410874 135 ntBASIC-1.06□□□□□ -2.58
DDX4Q9NQI0 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.06□□□□□ -2.58
DDX4Q9NQI0 AC091912.2-201ENST00000624798 167 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms