Protein–RNA interactions for Protein: Q9NQG5

RPRD1B, Regulation of nuclear pre-mRNA domain-containing protein 1B, humanhuman

Known RBP Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1BQ9NQG5 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.07□□□□□ -2.74
RPRD1BQ9NQG5 RNU6-686P-201ENST00000364839 107 ntBASIC-2.07□□□□□ -2.74
RPRD1BQ9NQG5 MIR125B1-201ENST00000385236 88 ntBASIC-2.07□□□□□ -2.74
RPRD1BQ9NQG5 RNU6-523P-201ENST00000516304 54 ntBASIC-2.07□□□□□ -2.74
RPRD1BQ9NQG5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.07□□□□□ -2.74
RPRD1BQ9NQG5 MIR1302-5-201ENST00000408164 150 ntBASIC-2.08□□□□□ -2.74
RPRD1BQ9NQG5 RNU6-402P-201ENST00000410678 103 ntBASIC-2.08□□□□□ -2.74
RPRD1BQ9NQG5 RNU6-172P-201ENST00000411000 93 ntBASIC-2.08□□□□□ -2.74
RPRD1BQ9NQG5 RNU6-182P-201ENST00000516970 105 ntBASIC-2.08□□□□□ -2.74
RPRD1BQ9NQG5 MIR365A-201ENST00000362260 87 ntBASIC-2.09□□□□□ -2.74
RPRD1BQ9NQG5 RNY4P18-201ENST00000391107 89 ntBASIC-2.09□□□□□ -2.74
RPRD1BQ9NQG5 MIR1468-201ENST00000410600 86 ntBASIC-2.09□□□□□ -2.74
RPRD1BQ9NQG5 AL117351.2-201ENST00000513571 157 ntBASIC-2.09□□□□□ -2.74
RPRD1BQ9NQG5 MIR3139-201ENST00000579145 76 ntBASIC-2.09□□□□□ -2.74
RPRD1BQ9NQG5 RNA5SP215-201ENST00000363440 122 ntBASIC-2.1□□□□□ -2.75
RPRD1BQ9NQG5 SNORD115-37-201ENST00000363768 82 ntBASIC-2.1□□□□□ -2.75
RPRD1BQ9NQG5 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.1□□□□□ -2.75
RPRD1BQ9NQG5 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.1□□□□□ -2.75
RPRD1BQ9NQG5 RNU6-668P-201ENST00000364180 107 ntBASIC-2.11□□□□□ -2.75
RPRD1BQ9NQG5 SNORD116-24-201ENST00000384549 92 ntBASIC-2.11□□□□□ -2.75
RPRD1BQ9NQG5 RNU6-118P-201ENST00000516552 102 ntBASIC-2.11□□□□□ -2.75
RPRD1BQ9NQG5 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.12□□□□□ -2.75
RPRD1BQ9NQG5 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.12□□□□□ -2.75
RPRD1BQ9NQG5 RNU6-995P-201ENST00000391244 107 ntBASIC-2.12□□□□□ -2.75
RPRD1BQ9NQG5 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.13□□□□□ -2.75
RPRD1BQ9NQG5 SNORA63-201ENST00000363450 132 ntBASIC-2.13□□□□□ -2.75
RPRD1BQ9NQG5 RNU6-194P-201ENST00000363862 105 ntBASIC-2.13□□□□□ -2.75
RPRD1BQ9NQG5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.13□□□□□ -2.75
RPRD1BQ9NQG5 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.13□□□□□ -2.75
RPRD1BQ9NQG5 RNU6-463P-201ENST00000384340 107 ntBASIC-2.14□□□□□ -2.75
RPRD1BQ9NQG5 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.14□□□□□ -2.75
RPRD1BQ9NQG5 MTND4LP1-201ENST00000446263 157 ntBASIC-2.14□□□□□ -2.75
RPRD1BQ9NQG5 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.14□□□□□ -2.75
RPRD1BQ9NQG5 SNORD116-14-201ENST00000383894 92 ntBASIC-2.15□□□□□ -2.75
RPRD1BQ9NQG5 SNORD116-17-201ENST00000383929 92 ntBASIC-2.15□□□□□ -2.75
RPRD1BQ9NQG5 SNORD116-15-201ENST00000384445 92 ntBASIC-2.15□□□□□ -2.75
RPRD1BQ9NQG5 SNORD116-19-201ENST00000384729 92 ntBASIC-2.15□□□□□ -2.75
RPRD1BQ9NQG5 RNU6-129P-201ENST00000391022 107 ntBASIC-2.16□□□□□ -2.76
RPRD1BQ9NQG5 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.17□□□□□ -2.76
RPRD1BQ9NQG5 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.17□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.17□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.17□□□□□ -2.76
RPRD1BQ9NQG5 MIR202-201ENST00000362219 110 ntBASIC-2.18□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-694P-201ENST00000364071 147 ntBASIC-2.18□□□□□ -2.76
RPRD1BQ9NQG5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
RPRD1BQ9NQG5 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.18□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.18□□□□□ -2.76
RPRD1BQ9NQG5 MIR4748-201ENST00000578076 82 ntBASIC-2.18□□□□□ -2.76
RPRD1BQ9NQG5 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.19□□□□□ -2.76
RPRD1BQ9NQG5 SNORD116-22-201ENST00000384430 92 ntBASIC-2.19□□□□□ -2.76
RPRD1BQ9NQG5 MIR488-201ENST00000365739 83 ntBASIC-2.2□□□□□ -2.76
RPRD1BQ9NQG5 RNY1P5-201ENST00000383890 115 ntBASIC-2.2□□□□□ -2.76
RPRD1BQ9NQG5 AC006160.2-201ENST00000637708 154 ntBASIC-2.2□□□□□ -2.76
RPRD1BQ9NQG5 MIR450A1-201ENST00000362262 91 ntBASIC-2.21□□□□□ -2.76
RPRD1BQ9NQG5 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.21□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-520P-201ENST00000384717 104 ntBASIC-2.21□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-68P-201ENST00000516576 104 ntBASIC-2.21□□□□□ -2.76
RPRD1BQ9NQG5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.21□□□□□ -2.76
RPRD1BQ9NQG5 SNORD18C-201ENST00000362704 69 ntBASIC-2.22□□□□□ -2.76
RPRD1BQ9NQG5 MT-TM-201ENST00000387377 68 ntBASIC-2.22□□□□□ -2.76
RPRD1BQ9NQG5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.22□□□□□ -2.76
RPRD1BQ9NQG5 AC097484.2-201ENST00000509147 251 ntBASIC-2.22□□□□□ -2.76
RPRD1BQ9NQG5 RNU6-589P-201ENST00000516485 107 ntBASIC-2.22□□□□□ -2.76
RPRD1BQ9NQG5 MALAT1.1-201ENST00000618249 95 ntBASIC-2.22□□□□□ -2.76
RPRD1BQ9NQG5 SNORD113-3-201ENST00000364830 72 ntBASIC-2.23□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.23□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.23□□□□□ -2.77
RPRD1BQ9NQG5 MIR548N-201ENST00000408742 75 ntBASIC-2.23□□□□□ -2.77
RPRD1BQ9NQG5 MIR8053-201ENST00000613344 75 ntBASIC-2.23□□□□□ -2.77
RPRD1BQ9NQG5 SNORA63.4-201ENST00000362763 126 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-810P-201ENST00000364001 107 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 MT-TG-201ENST00000387429 68 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.24□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-675P-201ENST00000384236 104 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-649P-201ENST00000384463 107 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 MIR1297-201ENST00000637311 77 ntBASIC-2.25□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-912P-201ENST00000363800 104 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 MIR466-201ENST00000580653 84 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 AL365222.1-201ENST00000614661 98 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 FTX_4.1-201ENST00000616291 147 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.26□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.27□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-141P-201ENST00000410499 105 ntBASIC-2.27□□□□□ -2.77
RPRD1BQ9NQG5 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.27□□□□□ -2.77
RPRD1BQ9NQG5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.27□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms