Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.66□□□□□ -2.99
SPENQ96T58 RNU6-835P-201ENST00000516974 104 ntBASIC-3.66□□□□□ -3
SPENQ96T58 RNU6-699P-201ENST00000517081 110 ntBASIC-3.66□□□□□ -3
SPENQ96T58 MIR4484-201ENST00000582855 83 ntBASIC-3.67□□□□□ -3
SPENQ96T58 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.67□□□□□ -3
SPENQ96T58 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.68□□□□□ -3
SPENQ96T58 RNU6-787P-201ENST00000384032 107 ntBASIC-3.68□□□□□ -3
SPENQ96T58 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.68□□□□□ -3
SPENQ96T58 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.68□□□□□ -3
SPENQ96T58 MIR3915-201ENST00000578518 97 ntBASIC-3.68□□□□□ -3
SPENQ96T58 RNU5A-2P-201ENST00000384337 116 ntBASIC-3.68□□□□□ -3
SPENQ96T58 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-3.68□□□□□ -3
SPENQ96T58 MIR4668-201ENST00000582284 70 ntBASIC-3.68□□□□□ -3
SPENQ96T58 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.69□□□□□ -3
SPENQ96T58 MIR8062-201ENST00000621515 85 ntBASIC-3.69□□□□□ -3
SPENQ96T58 RNU6-633P-201ENST00000362612 103 ntBASIC-3.7□□□□□ -3
SPENQ96T58 RNU6-894P-201ENST00000517094 105 ntBASIC-3.7□□□□□ -3
SPENQ96T58 MIR559-201ENST00000385188 96 ntBASIC-3.7□□□□□ -3
SPENQ96T58 RNU6-770P-201ENST00000363929 105 ntBASIC-3.71□□□□□ -3
SPENQ96T58 RNU6-59P-201ENST00000384787 107 ntBASIC-3.71□□□□□ -3
SPENQ96T58 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.71□□□□□ -3
SPENQ96T58 RNU6-294P-201ENST00000364999 102 ntBASIC-3.71□□□□□ -3
SPENQ96T58 MTATP8P2-201ENST00000435212 202 ntBASIC-3.71□□□□□ -3
SPENQ96T58 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.72□□□□□ -3
SPENQ96T58 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.72□□□□□ -3
SPENQ96T58 SNORD37.2-201ENST00000391075 66 ntBASIC-3.72□□□□□ -3
SPENQ96T58 MIR1302-6-201ENST00000408466 90 ntBASIC-3.72□□□□□ -3
SPENQ96T58 AC104985.2-201ENST00000620598 500 ntBASIC-3.72□□□□□ -3.01
SPENQ96T58 SNORD113-6-201ENST00000363345 75 ntBASIC-3.73□□□□□ -3.01
SPENQ96T58 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.73□□□□□ -3.01
SPENQ96T58 RNU6-838P-201ENST00000363399 108 ntBASIC-3.73□□□□□ -3.01
SPENQ96T58 MTND2P23-201ENST00000422990 651 ntBASIC-3.73□□□□□ -3.01
SPENQ96T58 AL589823.1-201ENST00000429577 183 ntBASIC-3.73□□□□□ -3.01
SPENQ96T58 AL160413.1-201ENST00000622780 310 ntBASIC-3.73□□□□□ -3.01
SPENQ96T58 RNU6-908P-201ENST00000410160 94 ntBASIC-3.74□□□□□ -3.01
SPENQ96T58 SNORD116.3-201ENST00000517176 78 ntBASIC-3.74□□□□□ -3.01
SPENQ96T58 AC078883.4-201ENST00000623218 367 ntBASIC-3.74□□□□□ -3.01
SPENQ96T58 RNU6-451P-201ENST00000362921 107 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 RNU6-574P-201ENST00000384265 107 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 AL035470.1-201ENST00000622571 220 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 RNU6-255P-201ENST00000516957 105 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 Y_RNA.88-201ENST00000363029 99 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 SNORA26.8-201ENST00000391306 124 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 SNORD58B-201ENST00000607313 66 ntBASIC-3.76□□□□□ -3.01
SPENQ96T58 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.77□□□□□ -3.01
SPENQ96T58 RNU7-121P-201ENST00000516604 62 ntBASIC-3.77□□□□□ -3.01
SPENQ96T58 RNU6-890P-201ENST00000384121 107 ntBASIC-3.78□□□□□ -3.01
SPENQ96T58 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-3.78□□□□□ -3.01
SPENQ96T58 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.79□□□□□ -3.02
SPENQ96T58 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.79□□□□□ -3.02
SPENQ96T58 SNORA40.15-201ENST00000516884 107 ntBASIC-3.8□□□□□ -3.02
SPENQ96T58 RNU6-663P-201ENST00000391105 106 ntBASIC-3.8□□□□□ -3.02
SPENQ96T58 RNU6-121P-201ENST00000410525 99 ntBASIC-3.8□□□□□ -3.02
SPENQ96T58 RNU6-907P-201ENST00000390924 102 ntBASIC-3.81□□□□□ -3.02
SPENQ96T58 RNY3P16-201ENST00000516338 101 ntBASIC-3.81□□□□□ -3.02
SPENQ96T58 U7.3-201ENST00000616123 62 ntBASIC-3.81□□□□□ -3.02
SPENQ96T58 RN7SKP298-201ENST00000515950 94 ntBASIC-3.82□□□□□ -3.02
SPENQ96T58 RNY3P15-201ENST00000516297 97 ntBASIC-3.82□□□□□ -3.02
SPENQ96T58 RNU6-483P-201ENST00000384088 108 ntBASIC-3.83□□□□□ -3.02
SPENQ96T58 RNU6-634P-201ENST00000459134 106 ntBASIC-3.83□□□□□ -3.02
SPENQ96T58 RNU6-904P-201ENST00000516206 101 ntBASIC-3.83□□□□□ -3.02
SPENQ96T58 MIR4282-201ENST00000583613 67 ntBASIC-3.83□□□□□ -3.02
SPENQ96T58 RNU6-1042P-201ENST00000384204 107 ntBASIC-3.84□□□□□ -3.02
SPENQ96T58 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.84□□□□□ -3.02
SPENQ96T58 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.84□□□□□ -3.02
SPENQ96T58 SNORD111B-201ENST00000408587 80 ntBASIC-3.85□□□□□ -3.03
SPENQ96T58 RNU6-797P-201ENST00000363101 109 ntBASIC-3.85□□□□□ -3.03
SPENQ96T58 RNU6-687P-201ENST00000516443 89 ntBASIC-3.85□□□□□ -3.03
SPENQ96T58 AC006160.2-201ENST00000637708 154 ntBASIC-3.86□□□□□ -3.03
SPENQ96T58 SNORD127-201ENST00000458892 86 ntBASIC-3.86□□□□□ -3.03
SPENQ96T58 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.87□□□□□ -3.03
SPENQ96T58 SNORD116-22-201ENST00000384430 92 ntBASIC-3.87□□□□□ -3.03
SPENQ96T58 RNU7-125P-201ENST00000458760 62 ntBASIC-3.87□□□□□ -3.03
SPENQ96T58 MIR5690-201ENST00000583739 73 ntBASIC-3.87□□□□□ -3.03
SPENQ96T58 RNU6-209P-201ENST00000384118 107 ntBASIC-3.88□□□□□ -3.03
SPENQ96T58 AP001340.1-201ENST00000624405 217 ntBASIC-3.88□□□□□ -3.03
SPENQ96T58 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.88□□□□□ -3.03
SPENQ96T58 RNU6-259P-201ENST00000383999 107 ntBASIC-3.89□□□□□ -3.03
SPENQ96T58 SNORD58C-201ENST00000365223 64 ntBASIC-3.89□□□□□ -3.03
SPENQ96T58 RNU6-81P-201ENST00000365608 104 ntBASIC-3.89□□□□□ -3.03
SPENQ96T58 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.89□□□□□ -3.03
SPENQ96T58 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.89□□□□□ -3.03
SPENQ96T58 U2.14-201ENST00000615943 113 ntBASIC-3.89□□□□□ -3.03
SPENQ96T58 AC072026.1-201ENST00000605023 201 ntBASIC-3.9□□□□□ -3.03
SPENQ96T58 AC103706.3-201ENST00000636297 85 ntBASIC-3.9□□□□□ -3.03
SPENQ96T58 RNU6-959P-201ENST00000384671 107 ntBASIC-3.9□□□□□ -3.03
SPENQ96T58 RNU6-460P-201ENST00000391158 108 ntBASIC-3.9□□□□□ -3.03
SPENQ96T58 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.9□□□□□ -3.03
SPENQ96T58 DEFB108C-201ENST00000400154 252 ntBASIC-3.91□□□□□ -3.03
SPENQ96T58 RNU6-232P-201ENST00000517144 64 ntBASIC-3.91□□□□□ -3.04
SPENQ96T58 RNU6-988P-201ENST00000519081 107 ntBASIC-3.91□□□□□ -3.04
SPENQ96T58 AC113139.1-201ENST00000605049 239 ntBASIC-3.91□□□□□ -3.04
SPENQ96T58 RNU6-315P-201ENST00000362666 107 ntBASIC-3.91□□□□□ -3.04
SPENQ96T58 RNU6-485P-201ENST00000363475 107 ntBASIC-3.92□□□□□ -3.04
SPENQ96T58 RNU4-14P-201ENST00000410858 122 ntBASIC-3.92□□□□□ -3.04
SPENQ96T58 SNORD116-29-201ENST00000384516 83 ntBASIC-3.93□□□□□ -3.04
SPENQ96T58 RNU6-239P-201ENST00000390990 99 ntBASIC-3.93□□□□□ -3.04
SPENQ96T58 RNU7-30P-201ENST00000516835 62 ntBASIC-3.93□□□□□ -3.04
SPENQ96T58 MTND4LP32-201ENST00000636111 270 ntBASIC-3.93□□□□□ -3.04
SPENQ96T58 RNU6-915P-201ENST00000364943 103 ntBASIC-3.94□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms