Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-828P-201ENST00000364876 107 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 MIR610-201ENST00000385139 96 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 Y_RNA.613-201ENST00000410726 97 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 RNU7-165P-201ENST00000458864 60 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 AP002795.1-201ENST00000534879 84 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 MIR4280-201ENST00000582178 76 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
CDK5RAP1Q96SZ6 AL451105.1-201ENST00000450005 189 ntBASIC0.23□□□□□ -2.37
CDK5RAP1Q96SZ6 MIR924-201ENST00000638017 53 ntBASIC0.23□□□□□ -2.37
CDK5RAP1Q96SZ6 SNORD114-9-201ENST00000364370 72 ntBASIC0.22□□□□□ -2.37
CDK5RAP1Q96SZ6 MIR548Q-201ENST00000408404 100 ntBASIC0.22□□□□□ -2.37
CDK5RAP1Q96SZ6 RNU7-159P-201ENST00000459284 62 ntBASIC0.22□□□□□ -2.37
CDK5RAP1Q96SZ6 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
CDK5RAP1Q96SZ6 MIR330-201ENST00000362196 94 ntBASIC0.2□□□□□ -2.38
CDK5RAP1Q96SZ6 RNU6-247P-201ENST00000362636 107 ntBASIC0.2□□□□□ -2.38
CDK5RAP1Q96SZ6 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
CDK5RAP1Q96SZ6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
CDK5RAP1Q96SZ6 RNU6-1008P-201ENST00000384160 104 ntBASIC0.19□□□□□ -2.38
CDK5RAP1Q96SZ6 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
CDK5RAP1Q96SZ6 MIR29B1-201ENST00000385015 81 ntBASIC0.18□□□□□ -2.38
CDK5RAP1Q96SZ6 RNU6-742P-201ENST00000365289 107 ntBASIC0.17□□□□□ -2.38
CDK5RAP1Q96SZ6 RNU6-1111P-201ENST00000391118 107 ntBASIC0.17□□□□□ -2.38
CDK5RAP1Q96SZ6 RNU6-530P-201ENST00000391180 107 ntBASIC0.16□□□□□ -2.38
CDK5RAP1Q96SZ6 MIR548AL-201ENST00000578416 97 ntBASIC0.16□□□□□ -2.38
CDK5RAP1Q96SZ6 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
CDK5RAP1Q96SZ6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.16□□□□□ -2.38
CDK5RAP1Q96SZ6 RNU6-1233P-201ENST00000362922 102 ntBASIC0.15□□□□□ -2.39
CDK5RAP1Q96SZ6 SNORD49B-201ENST00000365172 72 ntBASIC0.15□□□□□ -2.39
CDK5RAP1Q96SZ6 MIR8087-201ENST00000612745 78 ntBASIC0.15□□□□□ -2.39
CDK5RAP1Q96SZ6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CDK5RAP1Q96SZ6 SNORD18.2-201ENST00000459604 70 ntBASIC0.14□□□□□ -2.39
CDK5RAP1Q96SZ6 MIR6851-201ENST00000617060 67 ntBASIC0.14□□□□□ -2.39
CDK5RAP1Q96SZ6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CDK5RAP1Q96SZ6 RNA5SP169-201ENST00000517268 117 ntBASIC0.13□□□□□ -2.39
CDK5RAP1Q96SZ6 MIR6779-201ENST00000617283 64 ntBASIC0.13□□□□□ -2.39
CDK5RAP1Q96SZ6 SNORD22.1-201ENST00000516331 125 ntBASIC0.12□□□□□ -2.39
CDK5RAP1Q96SZ6 AL590491.3-201ENST00000610731 82 ntBASIC0.12□□□□□ -2.39
CDK5RAP1Q96SZ6 MIR4743-201ENST00000584576 69 ntBASIC0.11□□□□□ -2.39
CDK5RAP1Q96SZ6 RPL35AP4-201ENST00000412007 102 ntBASIC0.09□□□□□ -2.4
CDK5RAP1Q96SZ6 RNU6-608P-201ENST00000383927 104 ntBASIC0.08□□□□□ -2.4
CDK5RAP1Q96SZ6 RNA5SP330-201ENST00000517096 96 ntBASIC0.08□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR6718-201ENST00000616153 80 ntBASIC0.08□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR5683-201ENST00000636514 76 ntBASIC0.08□□□□□ -2.4
CDK5RAP1Q96SZ6 SNORD114-17-201ENST00000364699 75 ntBASIC0.07□□□□□ -2.4
CDK5RAP1Q96SZ6 SNORD114-12-201ENST00000365400 75 ntBASIC0.07□□□□□ -2.4
CDK5RAP1Q96SZ6 RNA5SP63-201ENST00000391225 112 ntBASIC0.07□□□□□ -2.4
CDK5RAP1Q96SZ6 RNY3P8-201ENST00000411366 126 ntBASIC0.07□□□□□ -2.4
CDK5RAP1Q96SZ6 Y_RNA.699-201ENST00000516803 93 ntBASIC0.07□□□□□ -2.4
CDK5RAP1Q96SZ6 RNA5SP66-201ENST00000517178 101 ntBASIC0.07□□□□□ -2.4
CDK5RAP1Q96SZ6 SNORD114-11-201ENST00000363738 75 ntBASIC0.06□□□□□ -2.4
CDK5RAP1Q96SZ6 RNU6-46P-201ENST00000383860 107 ntBASIC0.06□□□□□ -2.4
CDK5RAP1Q96SZ6 SNORA26.4-201ENST00000391188 123 ntBASIC0.06□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR1468-201ENST00000410600 86 ntBASIC0.06□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
CDK5RAP1Q96SZ6 AP000533.3-201ENST00000447704 118 ntBASIC0.05□□□□□ -2.4
CDK5RAP1Q96SZ6 RNA5SP457-201ENST00000363657 124 ntBASIC0.04□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR548H4-201ENST00000408689 111 ntBASIC0.04□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR1197-201ENST00000408818 88 ntBASIC0.04□□□□□ -2.4
CDK5RAP1Q96SZ6 RNU6-721P-201ENST00000410155 105 ntBASIC0.04□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
CDK5RAP1Q96SZ6 SNORD45.2-201ENST00000363552 72 ntBASIC0.03□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR518B-201ENST00000385127 83 ntBASIC0.03□□□□□ -2.4
CDK5RAP1Q96SZ6 MIR202-201ENST00000362219 110 ntBASIC0.02□□□□□ -2.41
CDK5RAP1Q96SZ6 SNORA27.2-201ENST00000363365 126 ntBASIC0.02□□□□□ -2.41
CDK5RAP1Q96SZ6 AC093726.3-201ENST00000637588 150 ntBASIC0.02□□□□□ -2.41
CDK5RAP1Q96SZ6 RNU6-1204P-201ENST00000363948 107 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 Y_RNA.321-201ENST00000365149 102 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 RNU6-1250P-201ENST00000391218 107 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 SNORD75.1-201ENST00000408373 60 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 AL353691.2-201ENST00000443795 59 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR3179-1-201ENST00000578940 84 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR3179-2-201ENST00000579107 84 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR3179-3-201ENST00000579566 84 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR3179-4-201ENST00000617599 84 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR4426-201ENST00000640330 63 ntBASIC0□□□□□ -2.41
CDK5RAP1Q96SZ6 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR507-201ENST00000385234 94 ntBASIC-0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR4788-201ENST00000639104 80 ntBASIC-0.01□□□□□ -2.41
CDK5RAP1Q96SZ6 SNORD115-33-201ENST00000363723 82 ntBASIC-0.02□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR204-201ENST00000385200 110 ntBASIC-0.02□□□□□ -2.41
CDK5RAP1Q96SZ6 RNU6-822P-201ENST00000362707 106 ntBASIC-0.03□□□□□ -2.41
CDK5RAP1Q96SZ6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.03□□□□□ -2.41
CDK5RAP1Q96SZ6 MIR4645-201ENST00000583158 77 ntBASIC-0.03□□□□□ -2.41
CDK5RAP1Q96SZ6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.04□□□□□ -2.42
CDK5RAP1Q96SZ6 RNU6-724P-201ENST00000390958 105 ntBASIC-0.04□□□□□ -2.42
CDK5RAP1Q96SZ6 MIR5190-201ENST00000581537 80 ntBASIC-0.04□□□□□ -2.42
CDK5RAP1Q96SZ6 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CDK5RAP1Q96SZ6 MIR4263-201ENST00000584745 83 ntBASIC-0.07□□□□□ -2.42
CDK5RAP1Q96SZ6 SNORA18.1-201ENST00000363418 128 ntBASIC-0.08□□□□□ -2.42
CDK5RAP1Q96SZ6 RNU6-59P-201ENST00000384787 107 ntBASIC-0.08□□□□□ -2.42
CDK5RAP1Q96SZ6 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.08□□□□□ -2.42
CDK5RAP1Q96SZ6 MIR3666-201ENST00000607845 111 ntBASIC-0.08□□□□□ -2.42
CDK5RAP1Q96SZ6 MIR2909-201ENST00000617113 69 ntBASIC-0.08□□□□□ -2.42
CDK5RAP1Q96SZ6 AC013734.1-201ENST00000619329 111 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 427 ms