Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.58□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.58□□□□□ -2.66
ZNF558Q96NG5 RNU7-88P-201ENST00000458752 63 ntBASIC-1.58□□□□□ -2.66
ZNF558Q96NG5 U7.5-201ENST00000517224 61 ntBASIC-1.58□□□□□ -2.66
ZNF558Q96NG5 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.58□□□□□ -2.66
ZNF558Q96NG5 RNU6-315P-201ENST00000362666 107 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 RNU6-400P-201ENST00000391173 106 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 RNU6-982P-201ENST00000516216 102 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.59□□□□□ -2.66
ZNF558Q96NG5 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.6□□□□□ -2.67
ZNF558Q96NG5 U4.2-201ENST00000618561 85 ntBASIC-1.6□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 MIR487B-201ENST00000385021 84 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 AC018880.2-201ENST00000414265 201 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 MIR4484-201ENST00000582855 83 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 IGLL4P-201ENST00000614590 133 ntBASIC-1.61□□□□□ -2.67
ZNF558Q96NG5 RNU6-228P-201ENST00000362700 106 ntBASIC-1.62□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.62□□□□□ -2.67
ZNF558Q96NG5 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.62□□□□□ -2.67
ZNF558Q96NG5 RNA5SP89-201ENST00000410300 108 ntBASIC-1.62□□□□□ -2.67
ZNF558Q96NG5 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.62□□□□□ -2.67
ZNF558Q96NG5 RNU6-49P-201ENST00000384256 107 ntBASIC-1.63□□□□□ -2.67
ZNF558Q96NG5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
ZNF558Q96NG5 MIR5588-201ENST00000581890 63 ntBASIC-1.63□□□□□ -2.67
ZNF558Q96NG5 MIR8053-201ENST00000613344 75 ntBASIC-1.63□□□□□ -2.67
ZNF558Q96NG5 RNY1P1-201ENST00000364372 112 ntBASIC-1.64□□□□□ -2.67
ZNF558Q96NG5 MTND4LP1-201ENST00000446263 157 ntBASIC-1.64□□□□□ -2.67
ZNF558Q96NG5 RNU6-79P-201ENST00000362511 107 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 RNU6-698P-201ENST00000363523 107 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 RNU6-34P-201ENST00000364874 107 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 RNU6-587P-201ENST00000391282 106 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 MIR548Q-201ENST00000408404 100 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 AC108019.1-201ENST00000512540 175 ntBASIC-1.65□□□□□ -2.67
ZNF558Q96NG5 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.66□□□□□ -2.68
ZNF558Q96NG5 SNORD114-3-201ENST00000364969 75 ntBASIC-1.66□□□□□ -2.68
ZNF558Q96NG5 RNU6-979P-201ENST00000383896 107 ntBASIC-1.66□□□□□ -2.68
ZNF558Q96NG5 RNU6-458P-201ENST00000384179 107 ntBASIC-1.66□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.66□□□□□ -2.68
ZNF558Q96NG5 U6.58-201ENST00000613107 107 ntBASIC-1.66□□□□□ -2.68
ZNF558Q96NG5 MIR429-201ENST00000362106 83 ntBASIC-1.68□□□□□ -2.68
ZNF558Q96NG5 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.68□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.68□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.68□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.69□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.69□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.69□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.69□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.7□□□□□ -2.68
ZNF558Q96NG5 RNA5SP215-201ENST00000363440 122 ntBASIC-1.7□□□□□ -2.68
ZNF558Q96NG5 MIR4756-201ENST00000577874 78 ntBASIC-1.7□□□□□ -2.68
ZNF558Q96NG5 U4.4-201ENST00000620626 117 ntBASIC-1.7□□□□□ -2.68
ZNF558Q96NG5 SNORD113.1-201ENST00000363280 73 ntBASIC-1.71□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.71□□□□□ -2.68
ZNF558Q96NG5 RNU6-608P-201ENST00000383927 104 ntBASIC-1.71□□□□□ -2.68
ZNF558Q96NG5 RNU7-171P-201ENST00000459581 62 ntBASIC-1.71□□□□□ -2.68
ZNF558Q96NG5 MIR664B-201ENST00000626756 61 ntBASIC-1.71□□□□□ -2.68
ZNF558Q96NG5 RNY4P27-201ENST00000363341 96 ntBASIC-1.72□□□□□ -2.68
ZNF558Q96NG5 RNU6-668P-201ENST00000364180 107 ntBASIC-1.72□□□□□ -2.68
ZNF558Q96NG5 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.72□□□□□ -2.68
ZNF558Q96NG5 RNU6-696P-201ENST00000390834 107 ntBASIC-1.72□□□□□ -2.68
ZNF558Q96NG5 MIR548V-201ENST00000584165 80 ntBASIC-1.72□□□□□ -2.68
ZNF558Q96NG5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.73□□□□□ -2.69
ZNF558Q96NG5 RNU6-695P-201ENST00000391157 104 ntBASIC-1.74□□□□□ -2.69
ZNF558Q96NG5 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.75□□□□□ -2.69
ZNF558Q96NG5 RNU6-153P-201ENST00000364422 104 ntBASIC-1.75□□□□□ -2.69
ZNF558Q96NG5 RNU6-630P-201ENST00000391258 106 ntBASIC-1.75□□□□□ -2.69
ZNF558Q96NG5 U2.22-201ENST00000636441 106 ntBASIC-1.75□□□□□ -2.69
ZNF558Q96NG5 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.76□□□□□ -2.69
ZNF558Q96NG5 MIR520D-201ENST00000385002 87 ntBASIC-1.76□□□□□ -2.69
ZNF558Q96NG5 MIR1245B-201ENST00000636115 69 ntBASIC-1.76□□□□□ -2.69
ZNF558Q96NG5 SNORD45A-201ENST00000384512 84 ntBASIC-1.77□□□□□ -2.69
ZNF558Q96NG5 RNY4P30-201ENST00000410216 95 ntBASIC-1.77□□□□□ -2.69
ZNF558Q96NG5 MIR23C-201ENST00000579846 100 ntBASIC-1.77□□□□□ -2.69
ZNF558Q96NG5 MIR4712-201ENST00000583750 82 ntBASIC-1.77□□□□□ -2.69
ZNF558Q96NG5 MIR664A-201ENST00000626086 82 ntBASIC-1.77□□□□□ -2.69
ZNF558Q96NG5 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.78□□□□□ -2.69
ZNF558Q96NG5 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.78□□□□□ -2.69
ZNF558Q96NG5 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.78□□□□□ -2.69
ZNF558Q96NG5 RNA5SP173-201ENST00000364857 136 ntBASIC-1.8□□□□□ -2.7
ZNF558Q96NG5 RNU6-841P-201ENST00000383872 107 ntBASIC-1.8□□□□□ -2.7
ZNF558Q96NG5 SNORD113-2-201ENST00000391082 72 ntBASIC-1.8□□□□□ -2.7
ZNF558Q96NG5 MIR1207-201ENST00000408249 87 ntBASIC-1.8□□□□□ -2.7
ZNF558Q96NG5 MIR3123-201ENST00000583417 75 ntBASIC-1.8□□□□□ -2.7
ZNF558Q96NG5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
ZNF558Q96NG5 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.81□□□□□ -2.7
ZNF558Q96NG5 MIR630-201ENST00000384957 97 ntBASIC-1.81□□□□□ -2.7
ZNF558Q96NG5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.81□□□□□ -2.7
ZNF558Q96NG5 AC120024.2-201ENST00000576526 175 ntBASIC-1.82□□□□□ -2.7
ZNF558Q96NG5 RNU6-598P-201ENST00000364017 105 ntBASIC-1.83□□□□□ -2.7
ZNF558Q96NG5 RNU6-563P-201ENST00000364872 108 ntBASIC-1.83□□□□□ -2.7
ZNF558Q96NG5 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.83□□□□□ -2.7
ZNF558Q96NG5 MIR450A2-201ENST00000385022 100 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms