Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 SNORD116-24-201ENST00000384549 92 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 RPL35AP4-201ENST00000412007 102 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 RNU6-706P-201ENST00000517229 104 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 MIR1245B-201ENST00000636115 69 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 MIR1297-201ENST00000637311 77 ntBASIC-0.87□□□□□ -2.55
LINC00477Q96M19 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.88□□□□□ -2.55
LINC00477Q96M19 AC138207.3-201ENST00000585289 166 ntBASIC-0.88□□□□□ -2.55
LINC00477Q96M19 RNU6-698P-201ENST00000363523 107 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 RNU6-34P-201ENST00000364874 107 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 SNORA41B-201ENST00000384785 128 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 SNORD113-2-201ENST00000391082 72 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 MIR4666B-201ENST00000578142 81 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 U2.18-201ENST00000622185 84 ntBASIC-0.89□□□□□ -2.55
LINC00477Q96M19 MIR450A2-201ENST00000385022 100 ntBASIC-0.9□□□□□ -2.55
LINC00477Q96M19 MIR507-201ENST00000385234 94 ntBASIC-0.9□□□□□ -2.55
LINC00477Q96M19 MIR527-201ENST00000385244 85 ntBASIC-0.9□□□□□ -2.55
LINC00477Q96M19 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.9□□□□□ -2.55
LINC00477Q96M19 snoU83B.1-201ENST00000517136 88 ntBASIC-0.9□□□□□ -2.55
LINC00477Q96M19 MIR520D-201ENST00000385002 87 ntBASIC-0.91□□□□□ -2.56
LINC00477Q96M19 AL353691.2-201ENST00000443795 59 ntBASIC-0.91□□□□□ -2.56
LINC00477Q96M19 RNU6-70P-201ENST00000516438 60 ntBASIC-0.91□□□□□ -2.56
LINC00477Q96M19 MIR6818-201ENST00000621576 65 ntBASIC-0.91□□□□□ -2.56
LINC00477Q96M19 MIR5683-201ENST00000636514 76 ntBASIC-0.91□□□□□ -2.56
LINC00477Q96M19 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.92□□□□□ -2.56
LINC00477Q96M19 RNU6-668P-201ENST00000364180 107 ntBASIC-0.92□□□□□ -2.56
LINC00477Q96M19 RNA5SP331-201ENST00000364986 107 ntBASIC-0.92□□□□□ -2.56
LINC00477Q96M19 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.92□□□□□ -2.56
LINC00477Q96M19 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.92□□□□□ -2.56
LINC00477Q96M19 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.93□□□□□ -2.56
LINC00477Q96M19 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.93□□□□□ -2.56
LINC00477Q96M19 MIR8485-201ENST00000401372 91 ntBASIC-0.93□□□□□ -2.56
LINC00477Q96M19 RNU6-687P-201ENST00000516443 89 ntBASIC-0.93□□□□□ -2.56
LINC00477Q96M19 MTND4LP1-201ENST00000446263 157 ntBASIC-0.94□□□□□ -2.56
LINC00477Q96M19 MIR8053-201ENST00000613344 75 ntBASIC-0.94□□□□□ -2.56
LINC00477Q96M19 RNU6-696P-201ENST00000390834 107 ntBASIC-0.95□□□□□ -2.56
LINC00477Q96M19 MIR548Q-201ENST00000408404 100 ntBASIC-0.95□□□□□ -2.56
LINC00477Q96M19 RNU6-608P-201ENST00000383927 104 ntBASIC-0.96□□□□□ -2.56
LINC00477Q96M19 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.96□□□□□ -2.56
LINC00477Q96M19 MIR29B1-201ENST00000385015 81 ntBASIC-0.96□□□□□ -2.56
LINC00477Q96M19 RNU6-630P-201ENST00000391258 106 ntBASIC-0.96□□□□□ -2.56
LINC00477Q96M19 AC090616.4-201ENST00000448026 115 ntBASIC-0.96□□□□□ -2.56
LINC00477Q96M19 AL627230.5-201ENST00000619807 58 ntBASIC-0.96□□□□□ -2.56
LINC00477Q96M19 SNORD1B-201ENST00000363091 84 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 RNU6-573P-201ENST00000383938 106 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 RNU6-242P-201ENST00000384359 107 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 MIR154-201ENST00000385243 84 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 SNX3P1X-201ENST00000414887 175 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 HLA-S-202ENST00000425174 53 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.97□□□□□ -2.56
LINC00477Q96M19 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 RNA5SP215-201ENST00000363440 122 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 SNORD73B-201ENST00000364394 72 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 SNORD116-16-201ENST00000384533 92 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 RNU6-380P-201ENST00000410207 107 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 RNA5SP461-201ENST00000516451 104 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 MIR6874-201ENST00000635894 71 ntBASIC-0.98□□□□□ -2.57
LINC00477Q96M19 RNU6-258P-201ENST00000390884 101 ntBASIC-0.99□□□□□ -2.57
LINC00477Q96M19 RNU6-523P-201ENST00000516304 54 ntBASIC-0.99□□□□□ -2.57
LINC00477Q96M19 MIR5591-201ENST00000578248 65 ntBASIC-0.99□□□□□ -2.57
LINC00477Q96M19 MIR4770-201ENST00000579149 58 ntBASIC-0.99□□□□□ -2.57
LINC00477Q96M19 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.99□□□□□ -2.57
LINC00477Q96M19 MIR889-201ENST00000401280 79 ntBASIC-1□□□□□ -2.57
LINC00477Q96M19 RNA5SP180-201ENST00000516181 101 ntBASIC-1□□□□□ -2.57
LINC00477Q96M19 RNA5SP170-201ENST00000517150 101 ntBASIC-1□□□□□ -2.57
LINC00477Q96M19 AC091912.2-201ENST00000624798 167 ntBASIC-1□□□□□ -2.57
LINC00477Q96M19 RNU6-820P-201ENST00000384273 107 ntBASIC-1.01□□□□□ -2.57
LINC00477Q96M19 MIR198-201ENST00000637333 62 ntBASIC-1.01□□□□□ -2.57
LINC00477Q96M19 RNU6-228P-201ENST00000362700 106 ntBASIC-1.02□□□□□ -2.57
LINC00477Q96M19 RNA5SP173-201ENST00000364857 136 ntBASIC-1.02□□□□□ -2.57
LINC00477Q96M19 RNU6-895P-201ENST00000384125 103 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 RNU6-540P-201ENST00000384622 101 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 MIR579-201ENST00000385221 98 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 MIR601-201ENST00000385256 79 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
LINC00477Q96M19 MIR1468-201ENST00000410600 86 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 MIR4490-201ENST00000582647 84 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 MIR3170-201ENST00000582699 77 ntBASIC-1.03□□□□□ -2.57
LINC00477Q96M19 RNY4P29-201ENST00000410801 97 ntBASIC-1.04□□□□□ -2.58
LINC00477Q96M19 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.04□□□□□ -2.58
LINC00477Q96M19 RNU6-226P-201ENST00000363778 107 ntBASIC-1.05□□□□□ -2.58
LINC00477Q96M19 MIR1255A-201ENST00000408338 113 ntBASIC-1.05□□□□□ -2.58
LINC00477Q96M19 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.05□□□□□ -2.58
LINC00477Q96M19 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.06□□□□□ -2.58
LINC00477Q96M19 RNU6-164P-201ENST00000364604 103 ntBASIC-1.06□□□□□ -2.58
LINC00477Q96M19 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.06□□□□□ -2.58
LINC00477Q96M19 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.06□□□□□ -2.58
LINC00477Q96M19 MIR6502-201ENST00000617296 76 ntBASIC-1.06□□□□□ -2.58
LINC00477Q96M19 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 RNU6-974P-201ENST00000384099 108 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 RNU6-411P-201ENST00000384451 107 ntBASIC-1.07□□□□□ -2.58
LINC00477Q96M19 RNA5SP225-201ENST00000410874 135 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms