Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-228P-201ENST00000362700 106 ntBASIC-1.17□□□□□ -2.6
CHMP4CQ96CF2 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.17□□□□□ -2.6
CHMP4CQ96CF2 MIR527-201ENST00000385244 85 ntBASIC-1.17□□□□□ -2.6
CHMP4CQ96CF2 MIR548AG1-201ENST00000579932 66 ntBASIC-1.17□□□□□ -2.6
CHMP4CQ96CF2 MIR1255A-201ENST00000408338 113 ntBASIC-1.18□□□□□ -2.6
CHMP4CQ96CF2 SNORD113-2-201ENST00000391082 72 ntBASIC-1.19□□□□□ -2.6
CHMP4CQ96CF2 RNU6-687P-201ENST00000516443 89 ntBASIC-1.19□□□□□ -2.6
CHMP4CQ96CF2 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.2□□□□□ -2.6
CHMP4CQ96CF2 MIR4499-201ENST00000584834 69 ntBASIC-1.2□□□□□ -2.6
CHMP4CQ96CF2 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.2□□□□□ -2.6
CHMP4CQ96CF2 MIR4679-1-201ENST00000637619 75 ntBASIC-1.2□□□□□ -2.6
CHMP4CQ96CF2 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.21□□□□□ -2.6
CHMP4CQ96CF2 SNORD115-31-201ENST00000365318 82 ntBASIC-1.21□□□□□ -2.6
CHMP4CQ96CF2 MIR630-201ENST00000384957 97 ntBASIC-1.21□□□□□ -2.6
CHMP4CQ96CF2 RNU6-857P-201ENST00000515893 110 ntBASIC-1.21□□□□□ -2.6
CHMP4CQ96CF2 RNU6-24P-201ENST00000384440 107 ntBASIC-1.22□□□□□ -2.6
CHMP4CQ96CF2 SNORD78.1-201ENST00000390866 65 ntBASIC-1.22□□□□□ -2.6
CHMP4CQ96CF2 RNU6-279P-201ENST00000391297 101 ntBASIC-1.22□□□□□ -2.6
CHMP4CQ96CF2 U4.4-201ENST00000620626 117 ntBASIC-1.22□□□□□ -2.6
CHMP4CQ96CF2 RNU6-458P-201ENST00000384179 107 ntBASIC-1.23□□□□□ -2.61
CHMP4CQ96CF2 RNU6-246P-201ENST00000384702 107 ntBASIC-1.23□□□□□ -2.61
CHMP4CQ96CF2 RNU7-88P-201ENST00000458752 63 ntBASIC-1.23□□□□□ -2.61
CHMP4CQ96CF2 U6.58-201ENST00000613107 107 ntBASIC-1.23□□□□□ -2.61
CHMP4CQ96CF2 MIR6738-201ENST00000619620 64 ntBASIC-1.23□□□□□ -2.61
CHMP4CQ96CF2 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
CHMP4CQ96CF2 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.24□□□□□ -2.61
CHMP4CQ96CF2 U7.5-201ENST00000517224 61 ntBASIC-1.24□□□□□ -2.61
CHMP4CQ96CF2 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.25□□□□□ -2.61
CHMP4CQ96CF2 RNU6-10P-201ENST00000384036 107 ntBASIC-1.25□□□□□ -2.61
CHMP4CQ96CF2 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.25□□□□□ -2.61
CHMP4CQ96CF2 SNORD115-33-201ENST00000363723 82 ntBASIC-1.26□□□□□ -2.61
CHMP4CQ96CF2 SNORD116-24-201ENST00000384549 92 ntBASIC-1.26□□□□□ -2.61
CHMP4CQ96CF2 SNORD64-201ENST00000386683 67 ntBASIC-1.26□□□□□ -2.61
CHMP4CQ96CF2 RNU6-431P-201ENST00000383874 107 ntBASIC-1.27□□□□□ -2.61
CHMP4CQ96CF2 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.27□□□□□ -2.61
CHMP4CQ96CF2 MIR1468-201ENST00000410600 86 ntBASIC-1.27□□□□□ -2.61
CHMP4CQ96CF2 RNU6-732P-201ENST00000516033 103 ntBASIC-1.27□□□□□ -2.61
CHMP4CQ96CF2 SCARNA17-201ENST00000516183 144 ntBASIC-1.27□□□□□ -2.61
CHMP4CQ96CF2 MIR378F-201ENST00000578143 78 ntBASIC-1.27□□□□□ -2.61
CHMP4CQ96CF2 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.28□□□□□ -2.61
CHMP4CQ96CF2 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.28□□□□□ -2.61
CHMP4CQ96CF2 MIR147A-201ENST00000385079 72 ntBASIC-1.3□□□□□ -2.62
CHMP4CQ96CF2 AL353691.2-201ENST00000443795 59 ntBASIC-1.31□□□□□ -2.62
CHMP4CQ96CF2 RNU6-634P-201ENST00000459134 106 ntBASIC-1.31□□□□□ -2.62
CHMP4CQ96CF2 RNA5SP225-201ENST00000410874 135 ntBASIC-1.32□□□□□ -2.62
CHMP4CQ96CF2 MIR4324-201ENST00000584846 72 ntBASIC-1.32□□□□□ -2.62
CHMP4CQ96CF2 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.33□□□□□ -2.62
CHMP4CQ96CF2 RNU6-871P-201ENST00000516122 100 ntBASIC-1.33□□□□□ -2.62
CHMP4CQ96CF2 SNORD63.1-201ENST00000516178 80 ntBASIC-1.33□□□□□ -2.62
CHMP4CQ96CF2 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.33□□□□□ -2.62
CHMP4CQ96CF2 MIR4320-201ENST00000636981 65 ntBASIC-1.34□□□□□ -2.62
CHMP4CQ96CF2 RNU6-696P-201ENST00000390834 107 ntBASIC-1.35□□□□□ -2.63
CHMP4CQ96CF2 RNU6-542P-201ENST00000516405 103 ntBASIC-1.35□□□□□ -2.63
CHMP4CQ96CF2 MIR382-201ENST00000637119 76 ntBASIC-1.35□□□□□ -2.63
CHMP4CQ96CF2 MIR601-201ENST00000385256 79 ntBASIC-1.36□□□□□ -2.63
CHMP4CQ96CF2 RNU6-663P-201ENST00000391105 106 ntBASIC-1.36□□□□□ -2.63
CHMP4CQ96CF2 MIR4723-201ENST00000585070 81 ntBASIC-1.36□□□□□ -2.63
CHMP4CQ96CF2 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.37□□□□□ -2.63
CHMP4CQ96CF2 snoU83B.1-201ENST00000517136 88 ntBASIC-1.37□□□□□ -2.63
CHMP4CQ96CF2 MIR198-201ENST00000637333 62 ntBASIC-1.37□□□□□ -2.63
CHMP4CQ96CF2 SNORD116-16-201ENST00000384533 92 ntBASIC-1.38□□□□□ -2.63
CHMP4CQ96CF2 MIR889-201ENST00000401280 79 ntBASIC-1.39□□□□□ -2.63
CHMP4CQ96CF2 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.4□□□□□ -2.63
CHMP4CQ96CF2 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.4□□□□□ -2.63
CHMP4CQ96CF2 RNU6-540P-201ENST00000384622 101 ntBASIC-1.4□□□□□ -2.63
CHMP4CQ96CF2 MIR548Q-201ENST00000408404 100 ntBASIC-1.4□□□□□ -2.63
CHMP4CQ96CF2 SNORD30.1-201ENST00000391309 70 ntBASIC-1.42□□□□□ -2.64
CHMP4CQ96CF2 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.42□□□□□ -2.64
CHMP4CQ96CF2 RNU6-630P-201ENST00000391258 106 ntBASIC-1.43□□□□□ -2.64
CHMP4CQ96CF2 MIR4490-201ENST00000582647 84 ntBASIC-1.43□□□□□ -2.64
CHMP4CQ96CF2 MIR5683-201ENST00000636514 76 ntBASIC-1.44□□□□□ -2.64
CHMP4CQ96CF2 MIR4662A-201ENST00000637499 67 ntBASIC-1.44□□□□□ -2.64
CHMP4CQ96CF2 SNORA41B-201ENST00000384785 128 ntBASIC-1.45□□□□□ -2.64
CHMP4CQ96CF2 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.45□□□□□ -2.64
CHMP4CQ96CF2 MIR3165-201ENST00000579874 75 ntBASIC-1.45□□□□□ -2.64
CHMP4CQ96CF2 RNU6-598P-201ENST00000364017 105 ntBASIC-1.46□□□□□ -2.64
CHMP4CQ96CF2 SNORD19-201ENST00000391191 68 ntBASIC-1.46□□□□□ -2.64
CHMP4CQ96CF2 RNU6-523P-201ENST00000516304 54 ntBASIC-1.46□□□□□ -2.64
CHMP4CQ96CF2 RNU6-92P-201ENST00000605893 104 ntBASIC-1.47□□□□□ -2.64
CHMP4CQ96CF2 RNU6-649P-201ENST00000384463 107 ntBASIC-1.48□□□□□ -2.65
CHMP4CQ96CF2 MIR507-201ENST00000385234 94 ntBASIC-1.48□□□□□ -2.65
CHMP4CQ96CF2 SNORA25.4-201ENST00000363666 124 ntBASIC-1.49□□□□□ -2.65
CHMP4CQ96CF2 RNA5SP192-201ENST00000364404 120 ntBASIC-1.49□□□□□ -2.65
CHMP4CQ96CF2 SNORA72.7-201ENST00000516349 94 ntBASIC-1.5□□□□□ -2.65
CHMP4CQ96CF2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CHMP4CQ96CF2 MIR4306-201ENST00000583390 91 ntBASIC-1.51□□□□□ -2.65
CHMP4CQ96CF2 U2.18-201ENST00000622185 84 ntBASIC-1.51□□□□□ -2.65
CHMP4CQ96CF2 RNU6-776P-201ENST00000364403 104 ntBASIC-1.52□□□□□ -2.65
CHMP4CQ96CF2 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.52□□□□□ -2.65
CHMP4CQ96CF2 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 MIR548AA1-201ENST00000384971 97 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 MIR8485-201ENST00000401372 91 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 RNU7-134P-201ENST00000458997 64 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 RNU6-539P-201ENST00000516665 103 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 AP002795.1-201ENST00000534879 84 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 MIR3115-201ENST00000577915 68 ntBASIC-1.54□□□□□ -2.66
CHMP4CQ96CF2 SNORD1B-201ENST00000363091 84 ntBASIC-1.55□□□□□ -2.66
CHMP4CQ96CF2 U6.111-201ENST00000636093 83 ntBASIC-1.56□□□□□ -2.66
CHMP4CQ96CF2 RNU6-706P-201ENST00000517229 104 ntBASIC-1.57□□□□□ -2.66
CHMP4CQ96CF2 MIR29B1-201ENST00000385015 81 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms